The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103487511

Identifier: 103487511

GI number: 103487511

Start: 2139974

End: 2141053

Strand: Direct

Name: 103487511

Synonym: Sala_2028

Alternate gene names: NA

Gene position: 2139974-2141053 (Clockwise)

Preceding gene: 103487503

Following gene: 103487515

Centisome position: 63.97

GC content: 68.7

Gene sequence:

>1080_bases
ATGAGCGAGCGTATCCAGCCCGCCGGAATCGGCGCCACCGGGAAAGGCGCTGTGCGCGCTGCCTTCGCAAATCAAGTGGC
CTATTGCCGCGCCAACGATGCCCCCATCACCGCGCGTATCGTCGCCGCGATCGCCAGCCTGCTGGACGACCCCGCGAGCA
ATTTTGCGCGCCGCATCGCCAACTGGCCGGGCGCGCCGCTCGCCGACGCGCTGCCGCTTCGCGCCGCGGGGGGCTTTCAC
GCGCTGCACCTGTCGGAGGCTGCGCATGAACTCGCCCCCATTTATGCCGACGCCGAGGACATCAACGACGCCGCGATCGT
CGCAGGTGTGGTTGCACGGCATGAAGCCGCGCTGCTCCCCTGGCTCGACGGCCCGCCGCAGACCAACGAGGCGGGGCGCT
CGTCAAACTTCATCGCGGCGATGCTGTGGCTCGCCGAACAGGGGTTGCCAGCGCATTTCGACTGCCTTGAAATCGGATCG
AGCGCGGGCATCAATCTGATGATCGACCGTTATCATTATGACCTCGGCGGCGTGCATGTCGGGCCGCAGCCCGGCGCGAT
GGCCTTCACCCCCGATTGGCGCGGCAACCATCCGCCCATGCACGCAATCGCCATTGCCGGGCTCAGGGGCTGCGACGTTG
CGCCGGTCGATCTCACCGACCCGGCGCAGGCGCTCCGCCTCAAAGCCTATATCTGGCCCGAACATGACGTCCGCTTCGCG
CGCATGGAAGCGGCGATCGCCGCCGCGTATGTGGAAAAGCCCTGTCTCATCCGCGCCAACGCCGCCGATTTCGTCGAGGC
CGAGCTGGCACGGCCACAGGCGGCGGGAACGACGCGCGTGCTGATGCACTCGATCGTCTGGCAATATGTCCCCGCCGAGC
AGCAGGCGCGCGTCACCGCCGCCATGGAAGTCGCGGGCGCCCGCGCCACCGCCGACCGCCCCGTCGCATGGATCGCGCTC
GAAGCGAACCGGACCGTCCACCATCACGAACTGGTCGTGCGCTACTGGCCGGGCGGCGACGTCCCCCGCAAGCTGGGCCA
TGCCCACGCGCACGGCGCGTGGATCGAGTGGCTGGCGTAA

Upstream 100 bases:

>100_bases
AGCGGCAGCGCCTCGTCGAGGATGCGTCCCTTGGGGATGGCAAAGATGATCGGTTCGGGCATAAGCGTCGCGCACATAGG
CGGCGAAGGGAAAAAGGGCA

Downstream 100 bases:

>100_bases
AGGGCCGTCGACAACCGGACTGCCGCTGACACTCCTGCCCGGCGCGACCGCCGATGACGCCGCGCGTCAGGGGCTTTCGG
TTTCCGAGGGCGGCACGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSERIQPAGIGATGKGAVRAAFANQVAYCRANDAPITARIVAAIASLLDDPASNFARRIANWPGAPLADALPLRAAGGFH
ALHLSEAAHELAPIYADAEDINDAAIVAGVVARHEAALLPWLDGPPQTNEAGRSSNFIAAMLWLAEQGLPAHFDCLEIGS
SAGINLMIDRYHYDLGGVHVGPQPGAMAFTPDWRGNHPPMHAIAIAGLRGCDVAPVDLTDPAQALRLKAYIWPEHDVRFA
RMEAAIAAAYVEKPCLIRANAADFVEAELARPQAAGTTRVLMHSIVWQYVPAEQQARVTAAMEVAGARATADRPVAWIAL
EANRTVHHHELVVRYWPGGDVPRKLGHAHAHGAWIEWLA

Sequences:

>Translated_359_residues
MSERIQPAGIGATGKGAVRAAFANQVAYCRANDAPITARIVAAIASLLDDPASNFARRIANWPGAPLADALPLRAAGGFH
ALHLSEAAHELAPIYADAEDINDAAIVAGVVARHEAALLPWLDGPPQTNEAGRSSNFIAAMLWLAEQGLPAHFDCLEIGS
SAGINLMIDRYHYDLGGVHVGPQPGAMAFTPDWRGNHPPMHAIAIAGLRGCDVAPVDLTDPAQALRLKAYIWPEHDVRFA
RMEAAIAAAYVEKPCLIRANAADFVEAELARPQAAGTTRVLMHSIVWQYVPAEQQARVTAAMEVAGARATADRPVAWIAL
EANRTVHHHELVVRYWPGGDVPRKLGHAHAHGAWIEWLA
>Mature_358_residues
SERIQPAGIGATGKGAVRAAFANQVAYCRANDAPITARIVAAIASLLDDPASNFARRIANWPGAPLADALPLRAAGGFHA
LHLSEAAHELAPIYADAEDINDAAIVAGVVARHEAALLPWLDGPPQTNEAGRSSNFIAAMLWLAEQGLPAHFDCLEIGSS
AGINLMIDRYHYDLGGVHVGPQPGAMAFTPDWRGNHPPMHAIAIAGLRGCDVAPVDLTDPAQALRLKAYIWPEHDVRFAR
MEAAIAAAYVEKPCLIRANAADFVEAELARPQAAGTTRVLMHSIVWQYVPAEQQARVTAAMEVAGARATADRPVAWIALE
ANRTVHHHELVVRYWPGGDVPRKLGHAHAHGAWIEWLA

Specific function: Unknown

COG id: COG4427

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38398; Mature: 38267

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERIQPAGIGATGKGAVRAAFANQVAYCRANDAPITARIVAAIASLLDDPASNFARRIA
CCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
NWPGAPLADALPLRAAGGFHALHLSEAAHELAPIYADAEDINDAAIVAGVVARHEAALLP
CCCCCCCHHCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEC
WLDGPPQTNEAGRSSNFIAAMLWLAEQGLPAHFDCLEIGSSAGINLMIDRYHYDLGGVHV
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCEEE
GPQPGAMAFTPDWRGNHPPMHAIAIAGLRGCDVAPVDLTDPAQALRLKAYIWPEHDVRFA
CCCCCCEEECCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCHHHHEEEEEECCCCCCHHH
RMEAAIAAAYVEKPCLIRANAADFVEAELARPQAAGTTRVLMHSIVWQYVPAEQQARVTA
HHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
AMEVAGARATADRPVAWIALEANRTVHHHELVVRYWPGGDVPRKLGHAHAHGAWIEWLA
HHHHHCCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCHHHHHCCCCCCCCCCEECC
>Mature Secondary Structure 
SERIQPAGIGATGKGAVRAAFANQVAYCRANDAPITARIVAAIASLLDDPASNFARRIA
CCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
NWPGAPLADALPLRAAGGFHALHLSEAAHELAPIYADAEDINDAAIVAGVVARHEAALLP
CCCCCCCHHCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEC
WLDGPPQTNEAGRSSNFIAAMLWLAEQGLPAHFDCLEIGSSAGINLMIDRYHYDLGGVHV
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEEEECCCCEEE
GPQPGAMAFTPDWRGNHPPMHAIAIAGLRGCDVAPVDLTDPAQALRLKAYIWPEHDVRFA
CCCCCCEEECCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCHHHHEEEEEECCCCCCHHH
RMEAAIAAAYVEKPCLIRANAADFVEAELARPQAAGTTRVLMHSIVWQYVPAEQQARVTA
HHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
AMEVAGARATADRPVAWIALEANRTVHHHELVVRYWPGGDVPRKLGHAHAHGAWIEWLA
HHHHHCCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCHHHHHCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA