| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487262
Identifier: 103487262
GI number: 103487262
Start: 1874868
End: 1875122
Strand: Direct
Name: 103487262
Synonym: Sala_1777
Alternate gene names: NA
Gene position: 1874868-1875122 (Clockwise)
Preceding gene: 103487261
Following gene: 103487263
Centisome position: 56.05
GC content: 63.92
Gene sequence:
>255_bases ATGAGCATTTCTCCTGAACCCGTCGCCGTTCGCTTTGACGAAGACAGCTTCTGGGTCGATCTGGAGGACGGCCGCAACCT CGGCATTCCCTTGGCATGGTTTCCCCGCCTCCTCCACGCCACCCCCGCCCAACGCGAAGCGGTGTCGCTCAGCCGCGCCG GCCTGCATTGGGAAGAAATCGACGAAGACATCTCGATCGCCGGCCTGATTGCCGGCCGCGGCGACCAGACCCGCAACCGG AAAAAGGCCGCATGA
Upstream 100 bases:
>100_bases GACGTCAATGTCGCCTATAACCGCGGCTTCTCGCCCCACACGCTGCGGCTTTTGAGCAATGTGATACTGGAGCGACGCAA ACAGATTGAAAGGGCGTGGA
Downstream 100 bases:
>100_bases GCCACTCGTCGCCGCTGAGGAATCCCTGAAAACCCCTCCCCTTCAGAGCCTGCCCCGGCGCAGGCCGGGGGGAGGGGCAG CGAAGCTTGCCAGCTTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSISPEPVAVRFDEDSFWVDLEDGRNLGIPLAWFPRLLHATPAQREAVSLSRAGLHWEEIDEDISIAGLIAGRGDQTRNR KKAA
Sequences:
>Translated_84_residues MSISPEPVAVRFDEDSFWVDLEDGRNLGIPLAWFPRLLHATPAQREAVSLSRAGLHWEEIDEDISIAGLIAGRGDQTRNR KKAA >Mature_83_residues SISPEPVAVRFDEDSFWVDLEDGRNLGIPLAWFPRLLHATPAQREAVSLSRAGLHWEEIDEDISIAGLIAGRGDQTRNRK KAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9368; Mature: 9236
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISPEPVAVRFDEDSFWVDLEDGRNLGIPLAWFPRLLHATPAQREAVSLSRAGLHWEEI CCCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHC DEDISIAGLIAGRGDQTRNRKKAA CCCCEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure SISPEPVAVRFDEDSFWVDLEDGRNLGIPLAWFPRLLHATPAQREAVSLSRAGLHWEEI CCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHC DEDISIAGLIAGRGDQTRNRKKAA CCCCEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA