| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487124
Identifier: 103487124
GI number: 103487124
Start: 1721785
End: 1722630
Strand: Direct
Name: 103487124
Synonym: Sala_1639
Alternate gene names: NA
Gene position: 1721785-1722630 (Clockwise)
Preceding gene: 103487123
Following gene: 103487125
Centisome position: 51.47
GC content: 60.76
Gene sequence:
>846_bases ATGCGTTTCGAAGGAACCAGCGCCTATATCGCCACCGACGACCTCAAGGTCGCGGTCAACGCCGCGACGCTGCTCCGCCG CCCCCTTCTCGTGAAGGGCGAACCGGGCACGGGCAAGACCGTGCTCGCCGAGGAGATCGCGAAAGCATTCGACGCGCCGC TGATCACCTGGAACATCAAATCGACGACCAAGGCGCAGCAAGGGCTTTACGAATATGATGCGGTGGCGCGCCTGCGCGAC GGGCAACTTGGCGAAGAGCGCGTCCACGACATCCGCAATTACATCAAGCGCGGAAAATTGTGGGAAGCCTTCACCTCGCC CAAGCTCCCCGTTCTGCTGATCGACGAGATCGACAAGGCCGACATCGAGTTTCCGAACGATCTGCTCCAGGAGCTCGATC GCATGGCCTTTCATGTCTATGAGACCGACGAGACGATCACCGCCCAAGAGCGCCCGATCGTCGTCATCACCTCGAACAAT GAAAAGGAGCTGCCCGACGCCTTCCTGCGCCGCTGCTTCTTCCACTATATCAAATTCCCCGACCGCGACACGATGGCGGA AATCGTCGAGGTCCACTTCCCCGGCATCCAGAAGACGCTGGTGAGCCGCGCGATGGACATTTTCTACGACGTTCGCGAGG TGCCGGGGCTCAAGAAAAAGCCGTCGACGAGCGAACTGATCGACTGGCTCAAGCTGCTGCTCGCCGAGGATATGCCGCTC GAAGTGCTGCAGAACCGCGATGTCGGCAAGGCGATCCCGCCCTTGCACGGCGCCCTCCTCAAGAATGAGCAGGATGTGAT GCTATTCGAAAAGCTCGCCTTCATGGCGCGGCGCCAGGGGGGCTGA
Upstream 100 bases:
>100_bases GCCCTGCCATGCCGGAGCCATGGCGCCTGTTTGCTTGCACCCTCCCCCTCCCCCCGCTATGCCTGCTTGACGTTCACGTT AAGGGAAAGGCTCTCCGTCC
Downstream 100 bases:
>100_bases GCGCTTGGATACCGCTGCCAAGAACAGGGCCGTGCTGCAACATGCCTTCGCCGAAACCGCGAAGGGTAATGGTCGCCCCT TTGTCGAGATGATGGCTGAC
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; MoxR-Like ATPase; AAA Family ATPase; ATPase AAA Family Protein; ATPase-Like Protein; AAA_5 ATPase; AAA ATPase; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; Aaa ATPase; Oligopeptide ABC Transporter; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; ClpA/ClpB Family Protein; ATPase Aaa Family; AAA ATPase Family Protein; MoxR-Like ATPase CoxD; ATPase Protein
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MRFEGTSAYIATDDLKVAVNAATLLRRPLLVKGEPGTGKTVLAEEIAKAFDAPLITWNIKSTTKAQQGLYEYDAVARLRD GQLGEERVHDIRNYIKRGKLWEAFTSPKLPVLLIDEIDKADIEFPNDLLQELDRMAFHVYETDETITAQERPIVVITSNN EKELPDAFLRRCFFHYIKFPDRDTMAEIVEVHFPGIQKTLVSRAMDIFYDVREVPGLKKKPSTSELIDWLKLLLAEDMPL EVLQNRDVGKAIPPLHGALLKNEQDVMLFEKLAFMARRQGG
Sequences:
>Translated_281_residues MRFEGTSAYIATDDLKVAVNAATLLRRPLLVKGEPGTGKTVLAEEIAKAFDAPLITWNIKSTTKAQQGLYEYDAVARLRD GQLGEERVHDIRNYIKRGKLWEAFTSPKLPVLLIDEIDKADIEFPNDLLQELDRMAFHVYETDETITAQERPIVVITSNN EKELPDAFLRRCFFHYIKFPDRDTMAEIVEVHFPGIQKTLVSRAMDIFYDVREVPGLKKKPSTSELIDWLKLLLAEDMPL EVLQNRDVGKAIPPLHGALLKNEQDVMLFEKLAFMARRQGG >Mature_281_residues MRFEGTSAYIATDDLKVAVNAATLLRRPLLVKGEPGTGKTVLAEEIAKAFDAPLITWNIKSTTKAQQGLYEYDAVARLRD GQLGEERVHDIRNYIKRGKLWEAFTSPKLPVLLIDEIDKADIEFPNDLLQELDRMAFHVYETDETITAQERPIVVITSNN EKELPDAFLRRCFFHYIKFPDRDTMAEIVEVHFPGIQKTLVSRAMDIFYDVREVPGLKKKPSTSELIDWLKLLLAEDMPL EVLQNRDVGKAIPPLHGALLKNEQDVMLFEKLAFMARRQGG
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32040; Mature: 32040
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFEGTSAYIATDDLKVAVNAATLLRRPLLVKGEPGTGKTVLAEEIAKAFDAPLITWNIK CCCCCCEEEEEECCCCEEHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECC STTKAQQGLYEYDAVARLRDGQLGEERVHDIRNYIKRGKLWEAFTSPKLPVLLIDEIDKA CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCCCC DIEFPNDLLQELDRMAFHVYETDETITAQERPIVVITSNNEKELPDAFLRRCFFHYIKFP CCCCCHHHHHHHHHHHEEEEECCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC DRDTMAEIVEVHFPGIQKTLVSRAMDIFYDVREVPGLKKKPSTSELIDWLKLLLAEDMPL CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCH EVLQNRDVGKAIPPLHGALLKNEQDVMLFEKLAFMARRQGG HHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRFEGTSAYIATDDLKVAVNAATLLRRPLLVKGEPGTGKTVLAEEIAKAFDAPLITWNIK CCCCCCEEEEEECCCCEEHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEECC STTKAQQGLYEYDAVARLRDGQLGEERVHDIRNYIKRGKLWEAFTSPKLPVLLIDEIDKA CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCCCC DIEFPNDLLQELDRMAFHVYETDETITAQERPIVVITSNNEKELPDAFLRRCFFHYIKFP CCCCCHHHHHHHHHHHEEEEECCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC DRDTMAEIVEVHFPGIQKTLVSRAMDIFYDVREVPGLKKKPSTSELIDWLKLLLAEDMPL CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCH EVLQNRDVGKAIPPLHGALLKNEQDVMLFEKLAFMARRQGG HHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA