Click here to switch to the map view.

The map label for this gene is nfrB [H]

Identifier: 103486094

GI number: 103486094

Start: 610286

End: 611737

Strand: Direct

Name: nfrB [H]

Synonym: Sala_0601

Alternate gene names: 103486094

Gene position: 610286-611737 (Clockwise)

Preceding gene: 103486088

Following gene: 103486095

Centisome position: 18.24

GC content: 67.08

Gene sequence:

>1452_bases
ATGCCATCGGTGGGGCGGGGCTGGCAAGTGGAGCTATCGACCGGGTGGCTGGAATGGCTGGTGCTGGGGGCGGGCCGCGA
ACTGATGCTGTTCGCATCGGTCGGCATATTGCTGATCGGGCTCGACGATCTGTTGCTCGACGCGCTGTGGCTGGCGACGC
GCGGGCAGCGCCGAGGCGAAACCGCGAGAGCGCCGCCGATTGAGGGGCGTATCGCCATTTTCGTGCCGGCGTGGGACGAG
GCCGCGGCGCTGCCCGCGATGCTTTGCCGGACCCTTGCCGCGTGGGACGGCGAGGATTTCCGGCTCTATGTCGGATGCTA
TCCCAATGACACGGCGACGATCTATGCCGTCTCGCAATTGGTCGCGCGCGACGCGCGGCTGCGGCTGGTGATCGGCGAGA
GCGAAGGCCCGACGACCAAGGGCGACAATCTGAACAGGCTCTGGGCCGCGCTTTGTGCCGACGAACGGGTGGAGGCCCGG
CGCTTTGCCGCGATCGTGCTTCACGATGCCGAAGATCATGTCCATCGGCACGAACTTGCGCTCTATCGGCAGCATTTGGC
TCATAATGCGATGGTGCAGATTCCCGTCGTGCCGATAATCGACCGGCGTGCGCGCTGGATCGGCGGCCATTATGCGGATG
AGTTTGCCGAGGCGCACGGCAAGGATATGCCGGTGCGCTCGCGCCTTGGCCTGCCGCTGCCCTCGGCCGGCGTCGGCTGC
GCCTTGACCCGCAGCGCGTTGGCCCTGCTCGCGATGGAGCGAGGGGGGTGTCCCTTTTCGAGCGACAGCCTGACGGAGGA
TTATGAGATCGGGATGGTGATCGGCGCCTATGGCCTCGGCGCGCGCTTCGTCGATGCGGCCGATCCCGCAGGCGACCGGA
TTGTGTCGCGGGGCGCGTTTCCGGGCCGCATCGACGCCGCGGTTCGGCAAAAGTCGCGCTGGATCGCCGGCATCGCAATG
GCGGGCTGGGATCATCTGGGTTGGCCCGGCTGTCGCCTGGGTCACAAGCAACGATCGACGGGACGCGACCTGCTCGCGCG
CTGGATGCTCTGGCGCGACCGTCGCGCGCCGCTCGCGGCGCTCATCCTGCTGGCCGCCTATGCGGGGCTCATTCTCGTCG
CAGCGGGGGTGGCGGGACAATTGCTGCTGGGCTGGAATGCGATCGAACCGGGGCCGACATTGCAATGGCTGCTCGTCGTA
AACGCGCTGCTTCTCGGCTGGCGCATGGCGCTGCGTATCCATTTCACCGCGCGCCTTCATGGCTGGCGCGAAGCGTCGTT
TGCCGTACCGCGTGCCTTTGTGGCGAACATCATCGCCATGCTCGCGGCACGGCGTTCCGTGCTGCTTTACTGGCGGATAT
TGCGCTCGGGCGAAGTGGTGTGGGACAAGACCGACCACAGCGAAACCGGCCTCGCGGTCGCGGATGCGCCGGTGCGCGTG
GCGATGCGGTGA

Upstream 100 bases:

>100_bases
ATTTCCTTCGTTCGTCAACTATTGTGACAATTGCTTAACGGCGCATGCGCTGCTTTACAAACGGAGGCGCTTGATTAGCA
CTCTTGCCTAGGATGGCGCC

Downstream 100 bases:

>100_bases
TGAAGCGCCGGGCCGGTGCGCGGCGCGACGCGCCCGCGCTGCGTTTCTTGTTCGGATGCGTCGGCGGATGGATTCTGCTG
CGCATCATGATGCTCTGGAA

Product: bacteriophage N4 adsorption protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MPSVGRGWQVELSTGWLEWLVLGAGRELMLFASVGILLIGLDDLLLDALWLATRGQRRGETARAPPIEGRIAIFVPAWDE
AAALPAMLCRTLAAWDGEDFRLYVGCYPNDTATIYAVSQLVARDARLRLVIGESEGPTTKGDNLNRLWAALCADERVEAR
RFAAIVLHDAEDHVHRHELALYRQHLAHNAMVQIPVVPIIDRRARWIGGHYADEFAEAHGKDMPVRSRLGLPLPSAGVGC
ALTRSALALLAMERGGCPFSSDSLTEDYEIGMVIGAYGLGARFVDAADPAGDRIVSRGAFPGRIDAAVRQKSRWIAGIAM
AGWDHLGWPGCRLGHKQRSTGRDLLARWMLWRDRRAPLAALILLAAYAGLILVAAGVAGQLLLGWNAIEPGPTLQWLLVV
NALLLGWRMALRIHFTARLHGWREASFAVPRAFVANIIAMLAARRSVLLYWRILRSGEVVWDKTDHSETGLAVADAPVRV
AMR

Sequences:

>Translated_483_residues
MPSVGRGWQVELSTGWLEWLVLGAGRELMLFASVGILLIGLDDLLLDALWLATRGQRRGETARAPPIEGRIAIFVPAWDE
AAALPAMLCRTLAAWDGEDFRLYVGCYPNDTATIYAVSQLVARDARLRLVIGESEGPTTKGDNLNRLWAALCADERVEAR
RFAAIVLHDAEDHVHRHELALYRQHLAHNAMVQIPVVPIIDRRARWIGGHYADEFAEAHGKDMPVRSRLGLPLPSAGVGC
ALTRSALALLAMERGGCPFSSDSLTEDYEIGMVIGAYGLGARFVDAADPAGDRIVSRGAFPGRIDAAVRQKSRWIAGIAM
AGWDHLGWPGCRLGHKQRSTGRDLLARWMLWRDRRAPLAALILLAAYAGLILVAAGVAGQLLLGWNAIEPGPTLQWLLVV
NALLLGWRMALRIHFTARLHGWREASFAVPRAFVANIIAMLAARRSVLLYWRILRSGEVVWDKTDHSETGLAVADAPVRV
AMR
>Mature_482_residues
PSVGRGWQVELSTGWLEWLVLGAGRELMLFASVGILLIGLDDLLLDALWLATRGQRRGETARAPPIEGRIAIFVPAWDEA
AALPAMLCRTLAAWDGEDFRLYVGCYPNDTATIYAVSQLVARDARLRLVIGESEGPTTKGDNLNRLWAALCADERVEARR
FAAIVLHDAEDHVHRHELALYRQHLAHNAMVQIPVVPIIDRRARWIGGHYADEFAEAHGKDMPVRSRLGLPLPSAGVGCA
LTRSALALLAMERGGCPFSSDSLTEDYEIGMVIGAYGLGARFVDAADPAGDRIVSRGAFPGRIDAAVRQKSRWIAGIAMA
GWDHLGWPGCRLGHKQRSTGRDLLARWMLWRDRRAPLAALILLAAYAGLILVAAGVAGQLLLGWNAIEPGPTLQWLLVVN
ALLLGWRMALRIHFTARLHGWREASFAVPRAFVANIIAMLAARRSVLLYWRILRSGEVVWDKTDHSETGLAVADAPVRVA
MR

Specific function: Required for bacteriophage N4 adsorption. May be a component of the phage receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786781, Length=468, Percent_Identity=31.4102564102564, Blast_Score=214, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007831 [H]

Pfam domain/function: PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 53036; Mature: 52905

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVGRGWQVELSTGWLEWLVLGAGRELMLFASVGILLIGLDDLLLDALWLATRGQRRGE
CCCCCCCEEEEECCCCEEHHHCCCCCCEEEHHHHHHHEECHHHHHHHHHHHHHCCCCCCC
TARAPPIEGRIAIFVPAWDEAAALPAMLCRTLAAWDGEDFRLYVGCYPNDTATIYAVSQL
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH
VARDARLRLVIGESEGPTTKGDNLNRLWAALCADERVEARRFAAIVLHDAEDHVHRHELA
HHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHH
LYRQHLAHNAMVQIPVVPIIDRRARWIGGHYADEFAEAHGKDMPVRSRLGLPLPSAGVGC
HHHHHHHCCCEEEECCEEHHCCHHHHCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCH
ALTRSALALLAMERGGCPFSSDSLTEDYEIGMVIGAYGLGARFVDAADPAGDRIVSRGAF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCHHHHCCCC
PGRIDAAVRQKSRWIAGIAMAGWDHLGWPGCRLGHKQRSTGRDLLARWMLWRDRRAPLAA
CCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
LILLAAYAGLILVAAGVAGQLLLGWNAIEPGPTLQWLLVVNALLLGWRMALRIHFTARLH
HHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEC
GWREASFAVPRAFVANIIAMLAARRSVLLYWRILRSGEVVWDKTDHSETGLAVADAPVRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCEEE
AMR
ECC
>Mature Secondary Structure 
PSVGRGWQVELSTGWLEWLVLGAGRELMLFASVGILLIGLDDLLLDALWLATRGQRRGE
CCCCCCEEEEECCCCEEHHHCCCCCCEEEHHHHHHHEECHHHHHHHHHHHHHCCCCCCC
TARAPPIEGRIAIFVPAWDEAAALPAMLCRTLAAWDGEDFRLYVGCYPNDTATIYAVSQL
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH
VARDARLRLVIGESEGPTTKGDNLNRLWAALCADERVEARRFAAIVLHDAEDHVHRHELA
HHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHH
LYRQHLAHNAMVQIPVVPIIDRRARWIGGHYADEFAEAHGKDMPVRSRLGLPLPSAGVGC
HHHHHHHCCCEEEECCEEHHCCHHHHCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCH
ALTRSALALLAMERGGCPFSSDSLTEDYEIGMVIGAYGLGARFVDAADPAGDRIVSRGAF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCHHHHCCCC
PGRIDAAVRQKSRWIAGIAMAGWDHLGWPGCRLGHKQRSTGRDLLARWMLWRDRRAPLAA
CCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
LILLAAYAGLILVAAGVAGQLLLGWNAIEPGPTLQWLLVVNALLLGWRMALRIHFTARLH
HHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEC
GWREASFAVPRAFVANIIAMLAARRSVLLYWRILRSGEVVWDKTDHSETGLAVADAPVRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCEEE
AMR
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]