The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103486020

Identifier: 103486020

GI number: 103486020

Start: 542505

End: 543173

Strand: Direct

Name: 103486020

Synonym: Sala_0527

Alternate gene names: NA

Gene position: 542505-543173 (Clockwise)

Preceding gene: 103486019

Following gene: 103486021

Centisome position: 16.22

GC content: 70.4

Gene sequence:

>669_bases
ATGCCGAGTAAACCGACACCGGCCCCCGCCTTCGCGGGGGCGACGGCTGAACCCAGCGCCTACCCCGATATGCGCGATCC
GCGCGTCATGGTCGCGGTGCCGCGGGCGCGGCGCGCGGCGATGGCGGCGTTGTGGGGGCTCGCCGCGCGGTTGACCAGAT
TGCTGCTCGACGCGCGCGAGCCGCTGATCGGACAGATCAAGCTTGCCTGGTGGCGCGACATGATGGCGATGCTGGCGGCC
GATCCTGCTGCACTCCCCAAGGGCGAACCGCTGCTCGCCGACCTCGCGGCGAGCTGGGCCGGGCAGGGCGGGCTCGACGC
GCTCGTCGATGCGGCCGAAACGATGCTGCTGGCAGAGGGCGATACCGGGCGACGGGTGGCATCCGTGCGCTTCGGCGCGC
ACCTCTTCGCGCTGTCGGGCGGCACGGAGCGCGGCGGTCAACGCTGGGGTCTTGTTTGGGGTGCGGGCGTCGTCGGGGCG
GAGGCCGAAGCGCGACAGCTTTTGCAGGACGCCAAAATATCCGGCGTGCCCTCACGCCGCGATTACGCCGGAAAGCGCGC
TCTGCTGATGCTCGACCGCTGGGCCGCGGCGATTGCAGCACGCGATGGCGAACGACACTTGCGAAGCGAAGGATTGCTGC
TTTTGCGCATCGGGCTGTTCGGCCGCTGA

Upstream 100 bases:

>100_bases
TGATCGACACGCCGCGCGTGGTGACGGCGGTGAAGGCGGTTCTCAATCGTTAATCCGTCGCCCCCGCGAAGGCGGGGGCC
GTCATCGGCCTTGCCCTTCC

Downstream 100 bases:

>100_bases
TCGAATAAATGCCGTCGGGGGTGGAAATACCGCCTGCGAACATCTATCTTGCCCGGTACAGAAATAGGGTCGCAGGGGAC
GCTTATGTTCAACGGGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MPSKPTPAPAFAGATAEPSAYPDMRDPRVMVAVPRARRAAMAALWGLAARLTRLLLDAREPLIGQIKLAWWRDMMAMLAA
DPAALPKGEPLLADLAASWAGQGGLDALVDAAETMLLAEGDTGRRVASVRFGAHLFALSGGTERGGQRWGLVWGAGVVGA
EAEARQLLQDAKISGVPSRRDYAGKRALLMLDRWAAAIAARDGERHLRSEGLLLLRIGLFGR

Sequences:

>Translated_222_residues
MPSKPTPAPAFAGATAEPSAYPDMRDPRVMVAVPRARRAAMAALWGLAARLTRLLLDAREPLIGQIKLAWWRDMMAMLAA
DPAALPKGEPLLADLAASWAGQGGLDALVDAAETMLLAEGDTGRRVASVRFGAHLFALSGGTERGGQRWGLVWGAGVVGA
EAEARQLLQDAKISGVPSRRDYAGKRALLMLDRWAAAIAARDGERHLRSEGLLLLRIGLFGR
>Mature_221_residues
PSKPTPAPAFAGATAEPSAYPDMRDPRVMVAVPRARRAAMAALWGLAARLTRLLLDAREPLIGQIKLAWWRDMMAMLAAD
PAALPKGEPLLADLAASWAGQGGLDALVDAAETMLLAEGDTGRRVASVRFGAHLFALSGGTERGGQRWGLVWGAGVVGAE
AEARQLLQDAKISGVPSRRDYAGKRALLMLDRWAAAIAARDGERHLRSEGLLLLRIGLFGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23637; Mature: 23506

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKPTPAPAFAGATAEPSAYPDMRDPRVMVAVPRARRAAMAALWGLAARLTRLLLDARE
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
PLIGQIKLAWWRDMMAMLAADPAALPKGEPLLADLAASWAGQGGLDALVDAAETMLLAEG
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEECC
DTGRRVASVRFGAHLFALSGGTERGGQRWGLVWGAGVVGAEAEARQLLQDAKISGVPSRR
CCCCEEEEEEECEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
DYAGKRALLMLDRWAAAIAARDGERHLRSEGLLLLRIGLFGR
HHCCCHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCCC
>Mature Secondary Structure 
PSKPTPAPAFAGATAEPSAYPDMRDPRVMVAVPRARRAAMAALWGLAARLTRLLLDARE
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
PLIGQIKLAWWRDMMAMLAADPAALPKGEPLLADLAASWAGQGGLDALVDAAETMLLAEG
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEECC
DTGRRVASVRFGAHLFALSGGTERGGQRWGLVWGAGVVGAEAEARQLLQDAKISGVPSRR
CCCCEEEEEEECEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC
DYAGKRALLMLDRWAAAIAARDGERHLRSEGLLLLRIGLFGR
HHCCCHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA