Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103485963
Identifier: 103485963
GI number: 103485963
Start: 482855
End: 483127
Strand: Direct
Name: 103485963
Synonym: Sala_0470
Alternate gene names: NA
Gene position: 482855-483127 (Clockwise)
Preceding gene: 103485962
Following gene: 103485964
Centisome position: 14.43
GC content: 64.84
Gene sequence:
>273_bases ATGCTTACCTGGATTATCGCAATCGTCATGGGCGGCATCATCGGCTGGCTGGCCAGCATCGTGATGCGCACCGACGCCCA GCAGGGCATCTTCCTCAACATCGTCGTCGGCTGCGTCGGTTCGATCCTCGGCCGCTTCCTGTTCGGCCGCTTCCTTGGCG GCGGCCACCTGCGCGGCGACGCATTCGATCCGATGACCCTGCTCACCGCTTTTATCGGCGCGGTGATCCTGCTTGCGATC GTCAACCTGGTCCGGCGCGGCCGCGTGCGCTGA
Upstream 100 bases:
>100_bases CCCGCACGCTCGCCATTCCGCTAGGCGATTTCAGATATGTGCGTTACCAATAACAGGGTGCCCGCACAGTCGGGCGATCA CAGATCGTAGGGGGTTATTC
Downstream 100 bases:
>100_bases TCGCCCCGGCACGGCCGACCGCGTGTCGGCCGGACGGAAAGAGGGTGGCCGCCCATGGGGCGCGCCGCCCTTTTTCGCGC GCGCAACCTCTGGAAATCAT
Product: transglycosylase-associated protein
Products: NA
Alternate protein names: Transglycosylase Associated Protein
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MLTWIIAIVMGGIIGWLASIVMRTDAQQGIFLNIVVGCVGSILGRFLFGRFLGGGHLRGDAFDPMTLLTAFIGAVILLAI VNLVRRGRVR
Sequences:
>Translated_90_residues MLTWIIAIVMGGIIGWLASIVMRTDAQQGIFLNIVVGCVGSILGRFLFGRFLGGGHLRGDAFDPMTLLTAFIGAVILLAI VNLVRRGRVR >Mature_90_residues MLTWIIAIVMGGIIGWLASIVMRTDAQQGIFLNIVVGCVGSILGRFLFGRFLGGGHLRGDAFDPMTLLTAFIGAVILLAI VNLVRRGRVR
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9698; Mature: 9698
Theoretical pI: Translated: 12.28; Mature: 12.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTWIIAIVMGGIIGWLASIVMRTDAQQGIFLNIVVGCVGSILGRFLFGRFLGGGHLRGD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AFDPMTLLTAFIGAVILLAIVNLVRRGRVR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLTWIIAIVMGGIIGWLASIVMRTDAQQGIFLNIVVGCVGSILGRFLFGRFLGGGHLRGD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AFDPMTLLTAFIGAVILLAIVNLVRRGRVR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA