Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103485894
Identifier: 103485894
GI number: 103485894
Start: 409685
End: 409858
Strand: Direct
Name: 103485894
Synonym: Sala_0400
Alternate gene names: NA
Gene position: 409685-409858 (Clockwise)
Preceding gene: 103485893
Following gene: 103485902
Centisome position: 12.25
GC content: 62.64
Gene sequence:
>174_bases ATGATGTTCAGCCTCTTCGGCACGGCACGCCTCAATGGCGTCGATCCGCTTGCCTGGTTCACCGACGTTCTCACCCGGAT CGCCGACATCCCCCAGAGCCGCCTACACGAACTCCTCCCATGGAGCTGGAAGGCTGCTCAGCAACCAAAGGACCACGCAG AGCTCGCCGCCTGA
Upstream 100 bases:
>100_bases GCTTGACCAACAACTCCGCCGAGCGCGAGCTTCGCGCCGTGGCGCGAGGCAGGAAGGCATGGCTCTTCGTGGGTTCGGAT CGGGCGGTGAGCGCGCGGCG
Downstream 100 bases:
>100_bases AACAACCTCACGGCCAGTCACCCCTCAGCCCGCGGCCGCTATCGGATGCGTTCCACACGCCAGAGCTTTGCGCTGAAAAG CTGGGCGCTCAAGATCGCAA
Product: transposase and inactivated derivative
Products: NA
Alternate protein names: Transposase; Transposase IS
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MMFSLFGTARLNGVDPLAWFTDVLTRIADIPQSRLHELLPWSWKAAQQPKDHAELAA
Sequences:
>Translated_57_residues MMFSLFGTARLNGVDPLAWFTDVLTRIADIPQSRLHELLPWSWKAAQQPKDHAELAA >Mature_57_residues MMFSLFGTARLNGVDPLAWFTDVLTRIADIPQSRLHELLPWSWKAAQQPKDHAELAA
Specific function: Unknown
COG id: COG3436
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6462; Mature: 6462
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFSLFGTARLNGVDPLAWFTDVLTRIADIPQSRLHELLPWSWKAAQQPKDHAELAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMFSLFGTARLNGVDPLAWFTDVLTRIADIPQSRLHELLPWSWKAAQQPKDHAELAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA