The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485893

Identifier: 103485893

GI number: 103485893

Start: 408303

End: 409688

Strand: Direct

Name: 103485893

Synonym: Sala_0399

Alternate gene names: NA

Gene position: 408303-409688 (Clockwise)

Preceding gene: 103485892

Following gene: 103485894

Centisome position: 12.21

GC content: 64.65

Gene sequence:

>1386_bases
GTGGCCAAGGTTCGGGCGATCAATGCCGACCTGTTGGCGCGCAACGCCTATCTCGAGTTGATGAATGAGAAGATGCGCCG
TGACAAATTTGGCGCGAGCTCCGAGCGTAGCCGCCGCCTGCGCGACCAATTGGAGCTGACCTTCGAGGAACTCGAGGCGA
ATGCCAGCGAAGCCGAACTCCTCGGGCAGATTGCAGCCGCAAAGACCACGGCGGTCACTGCCTTCACCCGCAAGCGGACC
ACGCGCCGGGACTTGCCCGCTGACCTGCCGCGCGAGAAGGTCGTGATCCCGGCCCCCCAGGCTTGCCCGTGCTGCGGCTC
TCACGATCTGGGCCATCTGCCCGCCGACATCACCGAAACGCTCGAGCGGGTACCCGCCCGTCACAAGGTCATCCAGACGG
TGCGGGAAAAAGTCTCGTGCCGTCAGTGCGAGAAGATCAGCCAGCCTCCGGCACCCTTCCACGTTACTCCGCGCGGGATG
TTCGGGCCACACTTCCTGGCCAACCTCGCCTTCCAGAAATACGGTCTGCACCAGCCCCTCAACAGCCAGCGCGATCGTCT
CGAGCGCGAAGGCATTCCCTTGAGCCTCTCGACGCTGGCCGATCAGATCGGCGCGATCTGCGTGGCCGTGAAGCCCCTGT
TCCTGCTTCTCGAAGCCCACGCCCTGTCCGCCGATCGGCTTCATGCCGACGACACCACGGTCCCACTTCTGGCCAAGCTC
AAGACCGAGGTGGCCAGGATCTGGGACTATGTGCGGGATGATCGGCCCTTCGGCGGCCCCGCGCCACCGGTTGCGCTCTG
CTACTACTCACGCAACCGCAAGGGAGAGCATCCGCGAGCGCACCTGGCCGGCTACAGCGGCATCCTGCAGGTCGACAAGT
TTGCCGGCTTCAATGACCTGTTCCGCGAGGGGCGGGGCGAAAAGCCGATGACGCGTGCGAACTGCTGGGCGCATAGCCGA
CGCGAGTTCTTCAAGCTCGTCGACATCAGGCAGCAGATGAAGCGCAGGAATGCCGTCGCCCCGCTCATCTCGCCCTTGGC
TAGCGAGGCGTTGGAACGGATTGACCGGCTCTTCGCCATCGAGCGTGACATCAACGGAAAGCGCGCTGCCGAGCGCCTGG
CCGTCCGTCAGGAGCAGTCGGCACCGATCGTCGTCGACCTGGAAAGCTGGATGCGCGAAACCCGCGCCAGCCTCTCGCGT
CATGATGCCGTGACCAAGGCGATCAACTACTTCCTCAACGACTGGGAGGGCTTCACCACATTCCTCGCCGATGGTCGGAT
CTGCTTGACCAACAACTCCGCCGAGCGCGAGCTTCGCGCCGTGGCGCGAGGCAGGAAGGCATGGCTCTTCGTGGGTTCGG
ATCGGGCGGTGAGCGCGCGGCGATGA

Upstream 100 bases:

>100_bases
GCGAGGCATCCAACGAGCTTGAACAGCTTCGTGCTGAACTCGCCGCCGTTCGCGAACAGGCCAGAAAAGCTCAGGATCAT
GCCCTTGAGGCTGAGCTGAA

Downstream 100 bases:

>100_bases
TGTTCAGCCTCTTCGGCACGGCACGCCTCAATGGCGTCGATCCGCTTGCCTGGTTCACCGACGTTCTCACCCGGATCGCC
GACATCCCCCAGAGCCGCCT

Product: transposase IS66

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MAKVRAINADLLARNAYLELMNEKMRRDKFGASSERSRRLRDQLELTFEELEANASEAELLGQIAAAKTTAVTAFTRKRT
TRRDLPADLPREKVVIPAPQACPCCGSHDLGHLPADITETLERVPARHKVIQTVREKVSCRQCEKISQPPAPFHVTPRGM
FGPHFLANLAFQKYGLHQPLNSQRDRLEREGIPLSLSTLADQIGAICVAVKPLFLLLEAHALSADRLHADDTTVPLLAKL
KTEVARIWDYVRDDRPFGGPAPPVALCYYSRNRKGEHPRAHLAGYSGILQVDKFAGFNDLFREGRGEKPMTRANCWAHSR
REFFKLVDIRQQMKRRNAVAPLISPLASEALERIDRLFAIERDINGKRAAERLAVRQEQSAPIVVDLESWMRETRASLSR
HDAVTKAINYFLNDWEGFTTFLADGRICLTNNSAERELRAVARGRKAWLFVGSDRAVSARR

Sequences:

>Translated_461_residues
MAKVRAINADLLARNAYLELMNEKMRRDKFGASSERSRRLRDQLELTFEELEANASEAELLGQIAAAKTTAVTAFTRKRT
TRRDLPADLPREKVVIPAPQACPCCGSHDLGHLPADITETLERVPARHKVIQTVREKVSCRQCEKISQPPAPFHVTPRGM
FGPHFLANLAFQKYGLHQPLNSQRDRLEREGIPLSLSTLADQIGAICVAVKPLFLLLEAHALSADRLHADDTTVPLLAKL
KTEVARIWDYVRDDRPFGGPAPPVALCYYSRNRKGEHPRAHLAGYSGILQVDKFAGFNDLFREGRGEKPMTRANCWAHSR
REFFKLVDIRQQMKRRNAVAPLISPLASEALERIDRLFAIERDINGKRAAERLAVRQEQSAPIVVDLESWMRETRASLSR
HDAVTKAINYFLNDWEGFTTFLADGRICLTNNSAERELRAVARGRKAWLFVGSDRAVSARR
>Mature_460_residues
AKVRAINADLLARNAYLELMNEKMRRDKFGASSERSRRLRDQLELTFEELEANASEAELLGQIAAAKTTAVTAFTRKRTT
RRDLPADLPREKVVIPAPQACPCCGSHDLGHLPADITETLERVPARHKVIQTVREKVSCRQCEKISQPPAPFHVTPRGMF
GPHFLANLAFQKYGLHQPLNSQRDRLEREGIPLSLSTLADQIGAICVAVKPLFLLLEAHALSADRLHADDTTVPLLAKLK
TEVARIWDYVRDDRPFGGPAPPVALCYYSRNRKGEHPRAHLAGYSGILQVDKFAGFNDLFREGRGEKPMTRANCWAHSRR
EFFKLVDIRQQMKRRNAVAPLISPLASEALERIDRLFAIERDINGKRAAERLAVRQEQSAPIVVDLESWMRETRASLSRH
DAVTKAINYFLNDWEGFTTFLADGRICLTNNSAERELRAVARGRKAWLFVGSDRAVSARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 52026; Mature: 51895

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVRAINADLLARNAYLELMNEKMRRDKFGASSERSRRLRDQLELTFEELEANASEAEL
CCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
LGQIAAAKTTAVTAFTRKRTTRRDLPADLPREKVVIPAPQACPCCGSHDLGHLPADITET
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHH
LERVPARHKVIQTVREKVSCRQCEKISQPPAPFHVTPRGMFGPHFLANLAFQKYGLHQPL
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCC
NSQRDRLEREGIPLSLSTLADQIGAICVAVKPLFLLLEAHALSADRLHADDTTVPLLAKL
CHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
KTEVARIWDYVRDDRPFGGPAPPVALCYYSRNRKGEHPRAHLAGYSGILQVDKFAGFNDL
HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHCCHHHH
FREGRGEKPMTRANCWAHSRREFFKLVDIRQQMKRRNAVAPLISPLASEALERIDRLFAI
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ERDINGKRAAERLAVRQEQSAPIVVDLESWMRETRASLSRHDAVTKAINYFLNDWEGFTT
HCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLADGRICLTNNSAERELRAVARGRKAWLFVGSDRAVSARR
HHHCCEEEEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure 
AKVRAINADLLARNAYLELMNEKMRRDKFGASSERSRRLRDQLELTFEELEANASEAEL
CCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
LGQIAAAKTTAVTAFTRKRTTRRDLPADLPREKVVIPAPQACPCCGSHDLGHLPADITET
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHH
LERVPARHKVIQTVREKVSCRQCEKISQPPAPFHVTPRGMFGPHFLANLAFQKYGLHQPL
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCC
NSQRDRLEREGIPLSLSTLADQIGAICVAVKPLFLLLEAHALSADRLHADDTTVPLLAKL
CHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
KTEVARIWDYVRDDRPFGGPAPPVALCYYSRNRKGEHPRAHLAGYSGILQVDKFAGFNDL
HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHCCHHHH
FREGRGEKPMTRANCWAHSRREFFKLVDIRQQMKRRNAVAPLISPLASEALERIDRLFAI
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ERDINGKRAAERLAVRQEQSAPIVVDLESWMRETRASLSRHDAVTKAINYFLNDWEGFTT
HCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLADGRICLTNNSAERELRAVARGRKAWLFVGSDRAVSARR
HHHCCEEEEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]