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The map label for this gene is xcpR [H]

Identifier: 103485811

GI number: 103485811

Start: 324333

End: 325826

Strand: Direct

Name: xcpR [H]

Synonym: Sala_0316

Alternate gene names: 103485811

Gene position: 324333-325826 (Clockwise)

Preceding gene: 103485810

Following gene: 103485812

Centisome position: 9.7

GC content: 68.34

Gene sequence:

>1494_bases
GTGAGCGACAGCGAACCGGCCGCGCCCGCAGCGGCGCCGGTCGACATCCCCTATGGCTTTGCGCGCGCACACGGTGTCGT
CATCGCGCCGGGCGAGGAGGGCGTCTGGCTCGCGACCCTGCGCGAAGGCAGCGATCCGGCGGTGCTGATCGAGGTCAAGC
GCCACCTCGCGCAGCCGCTGCGCGTCGCGACCGCCGATGCGGCCGATTTCGACCGGCTGCTGTCCGATCATTATGCGGTC
GACAGCTCGGCCGCGGCGATGGCGGGGTCGGTCGGCAGCGACGGGCTCGACCTCGGCATCCCCAGCGCCGAAGACCTGCT
CGACAGCGCCGACGACGCCCCCGCGATCCGCCTCATCAACGCGATCATCGCCGAAGCGGTGCGGCAGGGGGTCAGCGACA
TTCATATCGAACCCTATGAAAGCGGGCTGGTCGTGCGGATGCGCGCCGACGGCGTGCTGCGCGAGCATCTCAGGATGCCG
CCGCACGTCGCCCCCGTCGTCGTCAGCCGTATCAAGGTGATGGCGCGGCTCGACATCGCCGAACGCCGCGTGCCGCAGGA
CGGCCGCATCGGGCTGACGCTCGCGGGGAAAGCGGTCGATGTGCGCGTCTCGACCTTGCCGAGCCGCGCGGGCGAGCGCG
TGGTGATGCGTATCCTCGACAAGGACGCCGCCGGGATCGACTTCGACATACTCGGCCTGTCTGGCGAGGCGGACCGGATC
TTGCGCGAGGCGCTGGCCGAACCCAATGGCATCATCCTCGTCACCGGGCCGACCGGATCGGGCAAGACGACGACGCTCTA
TGCGGCCTTGAAGCAATTGAACGACGGGCAGCGCAATATCCTGACCGTCGAAGACCCGGTCGAATATGCCGTTGACGGCG
TGGGTCAGACGCAGGTGAACAGCAAGGTCGGGCTCGACTTTGCCGCGGGTCTGCGCGCGATCCTGCGCCAGGACCCCGAT
GTGGTGATGGTCGGCGAAATCCGCGACCGCGAAACCGCCGACATCGCGGTGCAGGCCTCGCTCACCGGCCATCTCGTGCT
CTCGACCGTCCACACCAATGATGCGGTGGGGGCGATCACGCGCCTGAAAGATCTGAAGGTCGAACCCTTCCTGCTCGCCT
CGACGCTGCGCGCGGTGATCGCGCAGCGGCTGGTGCGCAAGCTCTGTGACAATTGCCGCGAGCCGGTGCAGGCCGACAAC
AGCATTGCCGCGATGCTGGGGCTCGACATCGGCACCGTGATCTGGCGGCCCAAGGGCTGCGAGGCGTGCGGGGGCACGGG
CTTCAAGGGCCGCATCGGCGTGTTCGAGGCGATCAAGGTCGACGACACGGTGCGCCGCTATATCTATGCGGGTGGCGACG
AGGCGATGATCGCGAAGCACGCCTTTCTGAAATCGCCGACGCTGGCGTCCGCAGCGCGGACGATGGTCGCGAAGGGACTG
ACGACCGCCGAGGAAGCGATCCGCGTCGCGCGGCGCGAGGATGTCGATGCCTGA

Upstream 100 bases:

>100_bases
TCAACCTGCCCCAACTGCGTGGCACGGATGGCGCAGTGATCCAGACCGACGTGCCGCCGTCGGTTTCGCAGGCCCCCGCC
CCTCCCGCCGGAGACTATCC

Downstream 100 bases:

>100_bases
TTATCGCTATGTGGCGATCGATCCCGCAGGCCGCGAGCGCAAGGGGCGGTTGACCGCCGCGAACGACGATGCCGCGCGCG
CCGACCTGATCCGCCGCAAG

Product: type II secretion system protein E

Products: NA

Alternate protein names: Type II traffic warden ATPase [H]

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MSDSEPAAPAAAPVDIPYGFARAHGVVIAPGEEGVWLATLREGSDPAVLIEVKRHLAQPLRVATADAADFDRLLSDHYAV
DSSAAAMAGSVGSDGLDLGIPSAEDLLDSADDAPAIRLINAIIAEAVRQGVSDIHIEPYESGLVVRMRADGVLREHLRMP
PHVAPVVVSRIKVMARLDIAERRVPQDGRIGLTLAGKAVDVRVSTLPSRAGERVVMRILDKDAAGIDFDILGLSGEADRI
LREALAEPNGIILVTGPTGSGKTTTLYAALKQLNDGQRNILTVEDPVEYAVDGVGQTQVNSKVGLDFAAGLRAILRQDPD
VVMVGEIRDRETADIAVQASLTGHLVLSTVHTNDAVGAITRLKDLKVEPFLLASTLRAVIAQRLVRKLCDNCREPVQADN
SIAAMLGLDIGTVIWRPKGCEACGGTGFKGRIGVFEAIKVDDTVRRYIYAGGDEAMIAKHAFLKSPTLASAARTMVAKGL
TTAEEAIRVARREDVDA

Sequences:

>Translated_497_residues
MSDSEPAAPAAAPVDIPYGFARAHGVVIAPGEEGVWLATLREGSDPAVLIEVKRHLAQPLRVATADAADFDRLLSDHYAV
DSSAAAMAGSVGSDGLDLGIPSAEDLLDSADDAPAIRLINAIIAEAVRQGVSDIHIEPYESGLVVRMRADGVLREHLRMP
PHVAPVVVSRIKVMARLDIAERRVPQDGRIGLTLAGKAVDVRVSTLPSRAGERVVMRILDKDAAGIDFDILGLSGEADRI
LREALAEPNGIILVTGPTGSGKTTTLYAALKQLNDGQRNILTVEDPVEYAVDGVGQTQVNSKVGLDFAAGLRAILRQDPD
VVMVGEIRDRETADIAVQASLTGHLVLSTVHTNDAVGAITRLKDLKVEPFLLASTLRAVIAQRLVRKLCDNCREPVQADN
SIAAMLGLDIGTVIWRPKGCEACGGTGFKGRIGVFEAIKVDDTVRRYIYAGGDEAMIAKHAFLKSPTLASAARTMVAKGL
TTAEEAIRVARREDVDA
>Mature_496_residues
SDSEPAAPAAAPVDIPYGFARAHGVVIAPGEEGVWLATLREGSDPAVLIEVKRHLAQPLRVATADAADFDRLLSDHYAVD
SSAAAMAGSVGSDGLDLGIPSAEDLLDSADDAPAIRLINAIIAEAVRQGVSDIHIEPYESGLVVRMRADGVLREHLRMPP
HVAPVVVSRIKVMARLDIAERRVPQDGRIGLTLAGKAVDVRVSTLPSRAGERVVMRILDKDAAGIDFDILGLSGEADRIL
REALAEPNGIILVTGPTGSGKTTTLYAALKQLNDGQRNILTVEDPVEYAVDGVGQTQVNSKVGLDFAAGLRAILRQDPDV
VMVGEIRDRETADIAVQASLTGHLVLSTVHTNDAVGAITRLKDLKVEPFLLASTLRAVIAQRLVRKLCDNCREPVQADNS
IAAMLGLDIGTVIWRPKGCEACGGTGFKGRIGVFEAIKVDDTVRRYIYAGGDEAMIAKHAFLKSPTLASAARTMVAKGLT
TAEEAIRVARREDVDA

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=489, Percent_Identity=46.4212678936605, Blast_Score=410, Evalue=1e-115,
Organism=Escherichia coli, GI1786296, Length=443, Percent_Identity=41.3092550790068, Blast_Score=313, Evalue=1e-86,
Organism=Escherichia coli, GI87082188, Length=280, Percent_Identity=37.1428571428571, Blast_Score=127, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013369
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 52741; Mature: 52610

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSEPAAPAAAPVDIPYGFARAHGVVIAPGEEGVWLATLREGSDPAVLIEVKRHLAQPL
CCCCCCCCCCCCCCCCCCCHHHHCEEEEECCCCCEEEEEEECCCCCEEEHHHHHHHCCCH
RVATADAADFDRLLSDHYAVDSSAAAMAGSVGSDGLDLGIPSAEDLLDSADDAPAIRLIN
HEECCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHH
AIIAEAVRQGVSDIHIEPYESGLVVRMRADGVLREHLRMPPHVAPVVVSRIKVMARLDIA
HHHHHHHHCCHHHEEECCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ERRVPQDGRIGLTLAGKAVDVRVSTLPSRAGERVVMRILDKDAAGIDFDILGLSGEADRI
HHCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH
LREALAEPNGIILVTGPTGSGKTTTLYAALKQLNDGQRNILTVEDPVEYAVDGVGQTQVN
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCCCCCC
SKVGLDFAAGLRAILRQDPDVVMVGEIRDRETADIAVQASLTGHLVLSTVHTNDAVGAIT
CCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCHHHHHH
RLKDLKVEPFLLASTLRAVIAQRLVRKLCDNCREPVQADNSIAAMLGLDIGTVIWRPKGC
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEHHHHCCHHHEEECCCCC
EACGGTGFKGRIGVFEAIKVDDTVRRYIYAGGDEAMIAKHAFLKSPTLASAARTMVAKGL
CCCCCCCCCCCCCEEEEEECCHHHHHHEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
TTAEEAIRVARREDVDA
CHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDSEPAAPAAAPVDIPYGFARAHGVVIAPGEEGVWLATLREGSDPAVLIEVKRHLAQPL
CCCCCCCCCCCCCCCCCCHHHHCEEEEECCCCCEEEEEEECCCCCEEEHHHHHHHCCCH
RVATADAADFDRLLSDHYAVDSSAAAMAGSVGSDGLDLGIPSAEDLLDSADDAPAIRLIN
HEECCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHH
AIIAEAVRQGVSDIHIEPYESGLVVRMRADGVLREHLRMPPHVAPVVVSRIKVMARLDIA
HHHHHHHHCCHHHEEECCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ERRVPQDGRIGLTLAGKAVDVRVSTLPSRAGERVVMRILDKDAAGIDFDILGLSGEADRI
HHCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHH
LREALAEPNGIILVTGPTGSGKTTTLYAALKQLNDGQRNILTVEDPVEYAVDGVGQTQVN
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCCCCCC
SKVGLDFAAGLRAILRQDPDVVMVGEIRDRETADIAVQASLTGHLVLSTVHTNDAVGAIT
CCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCHHHHHH
RLKDLKVEPFLLASTLRAVIAQRLVRKLCDNCREPVQADNSIAAMLGLDIGTVIWRPKGC
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEHHHHCCHHHEEECCCCC
EACGGTGFKGRIGVFEAIKVDDTVRRYIYAGGDEAMIAKHAFLKSPTLASAARTMVAKGL
CCCCCCCCCCCCCEEEEEECCHHHHHHEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
TTAEEAIRVARREDVDA
CHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]