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The map label for this gene is xcpQ [H]

Identifier: 103485810

GI number: 103485810

Start: 322138

End: 324336

Strand: Direct

Name: xcpQ [H]

Synonym: Sala_0315

Alternate gene names: 103485810

Gene position: 322138-324336 (Clockwise)

Preceding gene: 103485809

Following gene: 103485811

Centisome position: 9.63

GC content: 66.94

Gene sequence:

>2199_bases
ATGCGTCTCAAACTGTCCCTGATGCTCGCCGCCGCGCTCGTTTCCGCAACCCCCGTGCCGGCGGTCGCCCAATATACGCT
GAACGTCCGCGACGCCGACATTCGCGCCTTCATCCAGGACGCGGCGCGGATCACCGGGCGCACCTTCGTCATCGACGGCC
GCGTCAACGGCAAGGTGTCGGTCGTCACCGACCGGCCGCTGTCGCGCAGCGAATATTTCGAGATTTTCCTCGCGACCTTG
CGCTCGAACGGGCTGGTCGCGGTGCCGGGGCCGAACGGTGCGTACCGCGTTCAGCCGATCGACGGCGCGGCGGCGCAGCC
GGGCCGGATCGGCAGCGGCGGCGCGGCGCAGAACCAGTTCGTCACCGAAATCATCCGCCTGCGTCATATCGACGCGGTCG
CCGCGGTCGAAACGCTGCGCCCGCTGGTCAGCGCGCAGGGCTCGCTCACCGCCAACCGCAACGCGAACAGCCTGGTGGTC
GCCGATTTTGCCGATAATATCCGCCGGATCCGGTCGCTCGCGGCGAGCATCGATCGCGACAGTTCGACCAGTCAGATCGT
CACGCTGAAAAATGCCGGCGCGCGCGAAATCGCCGCGGCGCTCCAGGCGCTCGTCCCGGCGGCGGGCGAGGGTGCGCGCG
CGCCGGTCGCGATCGTTCCGATCGACAGCAGCAACGCGATTGCGCTGCGCGGCGATCAGGCGCTCGTGACGCGCTTCGTC
GCGATGGCGAACGAGCTCGACGCCAAGGCGGCGGGTGGCACCGAGCTGCGCGTCTATTGGCTCGAACATGCCAATGCCGA
AACCTTGCTGCCGACGCTGCAACAGCTGATCGGCGGCGGCAGCGACCCGGTGCAAAGGGCGGGCTTGCCGCCTGCATCAT
CCTCTTCGTCCGGCGGCGACGGCAATGCGGCGCCCGCCGCCGCAGCCCCCGCATCCTCCTCGACCGGCGCCGGGGGCAGC
GGCAGCATCTCGACGCGCGGCCCGGCGATCGTCACGCGCTACGAGGGCGCCAACGCGATCATCGTCGCCGCGAACAGCGA
AGTGCAGCGGATGCTCGGCGAACTGATCCGCCAGCTCGACGCGCGGCGCCAGCAGGTGCTGGTCGAGGCGATCGTCGTCG
AAATCGGCGACGATGCGGCGAAGCGGCTGGGCGTCCAGTTCCTGCTCGGCGGCAAGAATATCCCCTTCGTCGCGACGAGC
TACAGCAATGCATCGCCCAATATCCTGACCCTGGGCGGCGCCTATGCCTCGACGCGGATCAGCGAAGAGACGACGACCAC
CGACGGCACCACCGTCGTCACCCAGACGACGAGCGCGCTCGGCGATGCCTTGCAGGAAGCCGCGGCGGCGCAACTGCTGT
CGGCAACCGGCGGCTTCGCGGGCTTTGCGGGCGACATCGGCAAGAACACCATCTTTGGCGCGATCATCAACGCGGTGAAG
TCGGACACGACCTCGAACCTGCTCGCGACGCCGCATATCGTCACGCTCGACAATCAGCCCGCCAAGTTCCTCGTCGGGCA
GGATGTTCCGATCACGACCGGCGAACAGCTGGGCGACAATTTCGAAAATGCCTTCCGCACCGTCCAGCGCGAAGAGGTCG
GGATCAAACTGGAGGTGACGCCGCAGGTCAACGGTGCAGGCGAAGTGAAGATGTTCCTGCGTCAGGAAGTGTCGAGCGTC
GCCGGTCCTGTTTCGTCGCGCAACAGCGACCTCATCCTCAACAAGCGTGCGTTCGAGACGGTGCTCACCGTCGACGATGG
CGAAATCCTGGCGATCGGCGGCCTGCTCAACGACGACGAGCGCAGGACGATCGAGCGTATTCCGCTTTTGAGCGACATTC
CGCTGATCGGCGAACTGTTCAAATCGCGCAGCCGGACGCGCGCCAAGACCAATTTGATGGTCTTCATCCGCCCGACGATC
CTGAAAAGCCGCGAGGACAATGCCGCGCTTACCGCGCGCCGCTATGGCTATATCCGTAACTTCCAGCTCCAGCGGAACCC
CGACGTCGAACCCGCGATCGACACGCTGGTGCGCGACTATATGGGCGCGACGCCGCCGTCGCCGCCGACACCGGACGATG
TGACTGTCGGCCCGGTCAACCTGCCCCAACTGCGTGGCACGGATGGCGCAGTGATCCAGACCGACGTGCCGCCGTCGGTT
TCGCAGGCCCCCGCCCCTCCCGCCGGAGACTATCCGTGA

Upstream 100 bases:

>100_bases
TTGCCAACCAACTCACGCCGGGCGCGCGCATCGCGCTCGAAGTCGAACGCGGCGCCAGCGTCGTTCCCGTCGCCATCTTC
CTTTCGAAGCAATAGGTTCT

Downstream 100 bases:

>100_bases
GCGACAGCGAACCGGCCGCGCCCGCAGCGGCGCCGGTCGACATCCCCTATGGCTTTGCGCGCGCACACGGTGTCGTCATC
GCGCCGGGCGAGGAGGGCGT

Product: type II and III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 732; Mature: 732

Protein sequence:

>732_residues
MRLKLSLMLAAALVSATPVPAVAQYTLNVRDADIRAFIQDAARITGRTFVIDGRVNGKVSVVTDRPLSRSEYFEIFLATL
RSNGLVAVPGPNGAYRVQPIDGAAAQPGRIGSGGAAQNQFVTEIIRLRHIDAVAAVETLRPLVSAQGSLTANRNANSLVV
ADFADNIRRIRSLAASIDRDSSTSQIVTLKNAGAREIAAALQALVPAAGEGARAPVAIVPIDSSNAIALRGDQALVTRFV
AMANELDAKAAGGTELRVYWLEHANAETLLPTLQQLIGGGSDPVQRAGLPPASSSSSGGDGNAAPAAAAPASSSTGAGGS
GSISTRGPAIVTRYEGANAIIVAANSEVQRMLGELIRQLDARRQQVLVEAIVVEIGDDAAKRLGVQFLLGGKNIPFVATS
YSNASPNILTLGGAYASTRISEETTTTDGTTVVTQTTSALGDALQEAAAAQLLSATGGFAGFAGDIGKNTIFGAIINAVK
SDTTSNLLATPHIVTLDNQPAKFLVGQDVPITTGEQLGDNFENAFRTVQREEVGIKLEVTPQVNGAGEVKMFLRQEVSSV
AGPVSSRNSDLILNKRAFETVLTVDDGEILAIGGLLNDDERRTIERIPLLSDIPLIGELFKSRSRTRAKTNLMVFIRPTI
LKSREDNAALTARRYGYIRNFQLQRNPDVEPAIDTLVRDYMGATPPSPPTPDDVTVGPVNLPQLRGTDGAVIQTDVPPSV
SQAPAPPAGDYP

Sequences:

>Translated_732_residues
MRLKLSLMLAAALVSATPVPAVAQYTLNVRDADIRAFIQDAARITGRTFVIDGRVNGKVSVVTDRPLSRSEYFEIFLATL
RSNGLVAVPGPNGAYRVQPIDGAAAQPGRIGSGGAAQNQFVTEIIRLRHIDAVAAVETLRPLVSAQGSLTANRNANSLVV
ADFADNIRRIRSLAASIDRDSSTSQIVTLKNAGAREIAAALQALVPAAGEGARAPVAIVPIDSSNAIALRGDQALVTRFV
AMANELDAKAAGGTELRVYWLEHANAETLLPTLQQLIGGGSDPVQRAGLPPASSSSSGGDGNAAPAAAAPASSSTGAGGS
GSISTRGPAIVTRYEGANAIIVAANSEVQRMLGELIRQLDARRQQVLVEAIVVEIGDDAAKRLGVQFLLGGKNIPFVATS
YSNASPNILTLGGAYASTRISEETTTTDGTTVVTQTTSALGDALQEAAAAQLLSATGGFAGFAGDIGKNTIFGAIINAVK
SDTTSNLLATPHIVTLDNQPAKFLVGQDVPITTGEQLGDNFENAFRTVQREEVGIKLEVTPQVNGAGEVKMFLRQEVSSV
AGPVSSRNSDLILNKRAFETVLTVDDGEILAIGGLLNDDERRTIERIPLLSDIPLIGELFKSRSRTRAKTNLMVFIRPTI
LKSREDNAALTARRYGYIRNFQLQRNPDVEPAIDTLVRDYMGATPPSPPTPDDVTVGPVNLPQLRGTDGAVIQTDVPPSV
SQAPAPPAGDYP
>Mature_732_residues
MRLKLSLMLAAALVSATPVPAVAQYTLNVRDADIRAFIQDAARITGRTFVIDGRVNGKVSVVTDRPLSRSEYFEIFLATL
RSNGLVAVPGPNGAYRVQPIDGAAAQPGRIGSGGAAQNQFVTEIIRLRHIDAVAAVETLRPLVSAQGSLTANRNANSLVV
ADFADNIRRIRSLAASIDRDSSTSQIVTLKNAGAREIAAALQALVPAAGEGARAPVAIVPIDSSNAIALRGDQALVTRFV
AMANELDAKAAGGTELRVYWLEHANAETLLPTLQQLIGGGSDPVQRAGLPPASSSSSGGDGNAAPAAAAPASSSTGAGGS
GSISTRGPAIVTRYEGANAIIVAANSEVQRMLGELIRQLDARRQQVLVEAIVVEIGDDAAKRLGVQFLLGGKNIPFVATS
YSNASPNILTLGGAYASTRISEETTTTDGTTVVTQTTSALGDALQEAAAAQLLSATGGFAGFAGDIGKNTIFGAIINAVK
SDTTSNLLATPHIVTLDNQPAKFLVGQDVPITTGEQLGDNFENAFRTVQREEVGIKLEVTPQVNGAGEVKMFLRQEVSSV
AGPVSSRNSDLILNKRAFETVLTVDDGEILAIGGLLNDDERRTIERIPLLSDIPLIGELFKSRSRTRAKTNLMVFIRPTI
LKSREDNAALTARRYGYIRNFQLQRNPDVEPAIDTLVRDYMGATPPSPPTPDDVTVGPVNLPQLRGTDGAVIQTDVPPSV
SQAPAPPAGDYP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=678, Percent_Identity=30.3834808259587, Blast_Score=263, Evalue=3e-71,
Organism=Escherichia coli, GI1789793, Length=332, Percent_Identity=23.4939759036145, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 76674; Mature: 76674

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKLSLMLAAALVSATPVPAVAQYTLNVRDADIRAFIQDAARITGRTFVIDGRVNGKVS
CEEEHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCEEE
VVTDRPLSRSEYFEIFLATLRSNGLVAVPGPNGAYRVQPIDGAAAQPGRIGSGGAAQNQF
EEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHH
VTEIIRLRHIDAVAAVETLRPLVSAQGSLTANRNANSLVVADFADNIRRIRSLAASIDRD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCC
SSTSQIVTLKNAGAREIAAALQALVPAAGEGARAPVAIVPIDSSNAIALRGDQALVTRFV
CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHH
AMANELDAKAAGGTELRVYWLEHANAETLLPTLQQLIGGGSDPVQRAGLPPASSSSSGGD
HHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCC
GNAAPAAAAPASSSTGAGGSGSISTRGPAIVTRYEGANAIIVAANSEVQRMLGELIRQLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHH
ARRQQVLVEAIVVEIGDDAAKRLGVQFLLGGKNIPFVATSYSNASPNILTLGGAYASTRI
HHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCCCCEEEECCCCCCCCEEEECCCHHHCCC
SEETTTTDGTTVVTQTTSALGDALQEAAAAQLLSATGGFAGFAGDIGKNTIFGAIINAVK
CCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
SDTTSNLLATPHIVTLDNQPAKFLVGQDVPITTGEQLGDNFENAFRTVQREEVGIKLEVT
CCCCCCEEECCEEEEECCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHCCEEEEEC
PQVNGAGEVKMFLRQEVSSVAGPVSSRNSDLILNKRAFETVLTVDDGEILAIGGLLNDDE
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCEEEECCCCCCHH
RRTIERIPLLSDIPLIGELFKSRSRTRAKTNLMVFIRPTILKSREDNAALTARRYGYIRN
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCCEEHHHHCCEEE
FQLQRNPDVEPAIDTLVRDYMGATPPSPPTPDDVTVGPVNLPQLRGTDGAVIQTDVPPSV
EEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCC
SQAPAPPAGDYP
CCCCCCCCCCCC
>Mature Secondary Structure
MRLKLSLMLAAALVSATPVPAVAQYTLNVRDADIRAFIQDAARITGRTFVIDGRVNGKVS
CEEEHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCEEE
VVTDRPLSRSEYFEIFLATLRSNGLVAVPGPNGAYRVQPIDGAAAQPGRIGSGGAAQNQF
EEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHH
VTEIIRLRHIDAVAAVETLRPLVSAQGSLTANRNANSLVVADFADNIRRIRSLAASIDRD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCC
SSTSQIVTLKNAGAREIAAALQALVPAAGEGARAPVAIVPIDSSNAIALRGDQALVTRFV
CCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHH
AMANELDAKAAGGTELRVYWLEHANAETLLPTLQQLIGGGSDPVQRAGLPPASSSSSGGD
HHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCC
GNAAPAAAAPASSSTGAGGSGSISTRGPAIVTRYEGANAIIVAANSEVQRMLGELIRQLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHH
ARRQQVLVEAIVVEIGDDAAKRLGVQFLLGGKNIPFVATSYSNASPNILTLGGAYASTRI
HHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCCCCEEEECCCCCCCCEEEECCCHHHCCC
SEETTTTDGTTVVTQTTSALGDALQEAAAAQLLSATGGFAGFAGDIGKNTIFGAIINAVK
CCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
SDTTSNLLATPHIVTLDNQPAKFLVGQDVPITTGEQLGDNFENAFRTVQREEVGIKLEVT
CCCCCCEEECCEEEEECCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHCCEEEEEC
PQVNGAGEVKMFLRQEVSSVAGPVSSRNSDLILNKRAFETVLTVDDGEILAIGGLLNDDE
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCEEEECCCCCCHH
RRTIERIPLLSDIPLIGELFKSRSRTRAKTNLMVFIRPTILKSREDNAALTARRYGYIRN
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCCEEHHHHCCEEE
FQLQRNPDVEPAIDTLVRDYMGATPPSPPTPDDVTVGPVNLPQLRGTDGAVIQTDVPPSV
EEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCC
SQAPAPPAGDYP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934833; 10984043 [H]