Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103485714
Identifier: 103485714
GI number: 103485714
Start: 227230
End: 227439
Strand: Direct
Name: 103485714
Synonym: Sala_0218
Alternate gene names: NA
Gene position: 227230-227439 (Clockwise)
Preceding gene: 103485713
Following gene: 103485715
Centisome position: 6.79
GC content: 72.38
Gene sequence:
>210_bases ATGACCGGTTCTGCCAAAAAGGCCTTTGCCCTTCGCCTTGATCCCGCGCTGTTCGCCGCGGTCGAGCGGATGGCCGCGGC CGACCTGCGCAGCGCCAACGCCGAGATCGAAGTGCTGCTGCGCGAGGCGCTGGCGCGGCGCGGCGTGCCGGTCAAGCCAC CCGCGCCGCCGCGCCGTGGCCGTCCGCCGAAGACCGATGCGCAGGACTGA
Upstream 100 bases:
>100_bases GCGATGGTGTCGAACCTGATGGTCGTGCTGTGCGGCGAACGCGATACGCAGCCGGTCGTCAACGCCGGCTCGCTTTACTG AGGCGCGCCGGACGCGAACG
Downstream 100 bases:
>100_bases TCCGGCGATTGCCGCGCAATCACAAAAGGAGTTTCGACATGCTGCACCTGTTCCTCGACGACCGCCCCTGGTTCCGCGCG AAACGGCGCGGTTATGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MTGSAKKAFALRLDPALFAAVERMAAADLRSANAEIEVLLREALARRGVPVKPPAPPRRGRPPKTDAQD
Sequences:
>Translated_69_residues MTGSAKKAFALRLDPALFAAVERMAAADLRSANAEIEVLLREALARRGVPVKPPAPPRRGRPPKTDAQD >Mature_68_residues TGSAKKAFALRLDPALFAAVERMAAADLRSANAEIEVLLREALARRGVPVKPPAPPRRGRPPKTDAQD
Specific function: Unknown
COG id: COG4877
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7405; Mature: 7273
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSAKKAFALRLDPALFAAVERMAAADLRSANAEIEVLLREALARRGVPVKPPAPPRRG CCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC RPPKTDAQD CCCCCCCCC >Mature Secondary Structure TGSAKKAFALRLDPALFAAVERMAAADLRSANAEIEVLLREALARRGVPVKPPAPPRRG CCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC RPPKTDAQD CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA