| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080962
Identifier: 99080962
GI number: 99080962
Start: 1206847
End: 1207725
Strand: Direct
Name: 99080962
Synonym: TM1040_1121
Alternate gene names: NA
Gene position: 1206847-1207725 (Clockwise)
Preceding gene: 99080961
Following gene: 99080963
Centisome position: 37.7
GC content: 58.59
Gene sequence:
>879_bases ATGCTTGAGCGTCGCCATATCGCGCGCGATATATCCTACTCCCACTCTGCCGAGACGCGGCCGGGTCGGATCATGATCCG TCTGATGGAAAACACCACCGGTCGGTTGCGGCTGATCAAACGGGCCAAGGGCTATGACATGGAAGTCGCCTCCGGGCGTA GTTTCTGGGATGTCATCGTCGAACGCTATGGCCTCAGCCTCGATGTGGTGGGCGGCAGCCTCGACGCGATCCCGCGCGAC AAGCCGGTGATCCTGATCGCCAACCATCCCTACGGCATCCTTGATGGGCTGATGATGGGGCATATCCTGTCGCGCACGCG CTGCGATTTTCGCATGCTGGCGCATCAGGTGTTTCGCAAGGCCGAGGATCTGAACAAGGTGATCCTGCCGATTGATTTTG CCGAAACCAAAGAGGCAATGAAGGTCAATCTGCAGACCCGCAAGGACGCGCTCGATTACTTGGGGCAGGGCGGCGCTATC GGGATCTTTCCGGGCGGCACGGTCTCCACGGCCTCCAAACCCTTTGCACATCCCATGGATCCGGGCTGGCGCGGCTTCAC CGCGCGGATGGTGGCCAAATCGGATGCGGTGGTGGTGCCTTTGTATTTCGACGGCCATACCTCGCGTCTGTTTCAGATCG CTTCGCACCTGCATTACACGTTGCGCATGGGGCTCTTGATTAAGGAGTTCAAAAAGCGCGTCGACACCCCCGTCAAGGTG GTGATCGGTGAGCCCATCGGGCGCGATGTGCTTGACCCCTTGGCAAAGGACTCCAAAGCAATGATGGATTTCCTGCGCAA AGCCACGTATGAGCTGTCACCAACACCGCTCAAATCCTATGACTACGGGTTCGAGTTCGAAGAAAAACACCGGGCGTGA
Upstream 100 bases:
>100_bases AATATGTTACCGAGGCCGGGCTAGATACACGCCCGGCCTTGGTCGGGGGAGGGTGCTTTGATCGGTGCCCTTTCCTTGTC TTTACGGAGATCACAAAGAC
Downstream 100 bases:
>100_bases CGCGCGCCCGCACACCCAAAGGCAGTGTGACATGGCAGTTGGTATTTTTGATTCCGGTCTTGGTGGTCTGACCGTGTTGG ATGCGGCGCAAAAGCGCCTG
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Domain-Containing Protein; Acyltransferase Family Protein; Acyltransferase; Phospholipid/Glycerol Acyltransferase Hemolysin
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MLERRHIARDISYSHSAETRPGRIMIRLMENTTGRLRLIKRAKGYDMEVASGRSFWDVIVERYGLSLDVVGGSLDAIPRD KPVILIANHPYGILDGLMMGHILSRTRCDFRMLAHQVFRKAEDLNKVILPIDFAETKEAMKVNLQTRKDALDYLGQGGAI GIFPGGTVSTASKPFAHPMDPGWRGFTARMVAKSDAVVVPLYFDGHTSRLFQIASHLHYTLRMGLLIKEFKKRVDTPVKV VIGEPIGRDVLDPLAKDSKAMMDFLRKATYELSPTPLKSYDYGFEFEEKHRA
Sequences:
>Translated_292_residues MLERRHIARDISYSHSAETRPGRIMIRLMENTTGRLRLIKRAKGYDMEVASGRSFWDVIVERYGLSLDVVGGSLDAIPRD KPVILIANHPYGILDGLMMGHILSRTRCDFRMLAHQVFRKAEDLNKVILPIDFAETKEAMKVNLQTRKDALDYLGQGGAI GIFPGGTVSTASKPFAHPMDPGWRGFTARMVAKSDAVVVPLYFDGHTSRLFQIASHLHYTLRMGLLIKEFKKRVDTPVKV VIGEPIGRDVLDPLAKDSKAMMDFLRKATYELSPTPLKSYDYGFEFEEKHRA >Mature_292_residues MLERRHIARDISYSHSAETRPGRIMIRLMENTTGRLRLIKRAKGYDMEVASGRSFWDVIVERYGLSLDVVGGSLDAIPRD KPVILIANHPYGILDGLMMGHILSRTRCDFRMLAHQVFRKAEDLNKVILPIDFAETKEAMKVNLQTRKDALDYLGQGGAI GIFPGGTVSTASKPFAHPMDPGWRGFTARMVAKSDAVVVPLYFDGHTSRLFQIASHLHYTLRMGLLIKEFKKRVDTPVKV VIGEPIGRDVLDPLAKDSKAMMDFLRKATYELSPTPLKSYDYGFEFEEKHRA
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32993; Mature: 32993
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERRHIARDISYSHSAETRPGRIMIRLMENTTGRLRLIKRAKGYDMEVASGRSFWDVIV CCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHCCCCCEEECCCCHHHHHHH ERYGLSLDVVGGSLDAIPRDKPVILIANHPYGILDGLMMGHILSRTRCDFRMLAHQVFRK HHHCCEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEDLNKVILPIDFAETKEAMKVNLQTRKDALDYLGQGGAIGIFPGGTVSTASKPFAHPMD HHHCCEEEEEECHHHHHHHHEEEHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC PGWRGFTARMVAKSDAVVVPLYFDGHTSRLFQIASHLHYTLRMGLLIKEFKKRVDTPVKV CCCCCCEEHEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VIGEPIGRDVLDPLAKDSKAMMDFLRKATYELSPTPLKSYDYGFEFEEKHRA EECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MLERRHIARDISYSHSAETRPGRIMIRLMENTTGRLRLIKRAKGYDMEVASGRSFWDVIV CCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHCCCCCEEECCCCHHHHHHH ERYGLSLDVVGGSLDAIPRDKPVILIANHPYGILDGLMMGHILSRTRCDFRMLAHQVFRK HHHCCEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEDLNKVILPIDFAETKEAMKVNLQTRKDALDYLGQGGAIGIFPGGTVSTASKPFAHPMD HHHCCEEEEEECHHHHHHHHEEEHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC PGWRGFTARMVAKSDAVVVPLYFDGHTSRLFQIASHLHYTLRMGLLIKEFKKRVDTPVKV CCCCCCEEHEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VIGEPIGRDVLDPLAKDSKAMMDFLRKATYELSPTPLKSYDYGFEFEEKHRA EECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA