| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080917
Identifier: 99080917
GI number: 99080917
Start: 1151953
End: 1152252
Strand: Direct
Name: 99080917
Synonym: TM1040_1076
Alternate gene names: NA
Gene position: 1151953-1152252 (Clockwise)
Preceding gene: 99080916
Following gene: 99080926
Centisome position: 35.99
GC content: 63.0
Gene sequence:
>300_bases ATGACGGCCTATATCATCGGCCAGTTGCAGATTCAGTCGCGGGACTGGATGGAGGAATACTATGCCAAGGTGCCGCAGGT GCTCGAAGCGCATGGCGGGCGTTTTTTGGTCCGAGGGGGAGACCCGGCGCGCATGGAGGGCATGGATCCGACGCCGGATG CGGCTGTGGTTCTGGAGTTCCCCGACCGCGCCCATGCAGAGGCGTTCTGGAATTCGGATGCGTTTCAAGCGCTTGCGCAG CTGCGCCGGACTGGCTCCTCGCTGAACGCGATCCTGGTGGATAAGCTCCCCGACGCCTGA
Upstream 100 bases:
>100_bases GTCCGGCCCCTTTGCGTTTTTGGCCCGCGCGGGATTTGGCAAATGCGCAAGCAGGCTCTAGGCTCCTGAGGGATCAACAG CGAGACGGGGAGGCAGCCGC
Downstream 100 bases:
>100_bases TGCATGCCGGAGAAGGCCGTGCGCTGGCGCGGGATGCGCAGTTGGCACAGCGCTCAAGACGGGGCCCGGCAGATCGAAGA AGCAGATAGAAAAAGGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MTAYIIGQLQIQSRDWMEEYYAKVPQVLEAHGGRFLVRGGDPARMEGMDPTPDAAVVLEFPDRAHAEAFWNSDAFQALAQ LRRTGSSLNAILVDKLPDA
Sequences:
>Translated_99_residues MTAYIIGQLQIQSRDWMEEYYAKVPQVLEAHGGRFLVRGGDPARMEGMDPTPDAAVVLEFPDRAHAEAFWNSDAFQALAQ LRRTGSSLNAILVDKLPDA >Mature_98_residues TAYIIGQLQIQSRDWMEEYYAKVPQVLEAHGGRFLVRGGDPARMEGMDPTPDAAVVLEFPDRAHAEAFWNSDAFQALAQL RRTGSSLNAILVDKLPDA
Specific function: Unknown
COG id: COG5470
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11005; Mature: 10873
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAYIIGQLQIQSRDWMEEYYAKVPQVLEAHGGRFLVRGGDPARMEGMDPTPDAAVVLEF CCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEC PDRAHAEAFWNSDAFQALAQLRRTGSSLNAILVDKLPDA CCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCC >Mature Secondary Structure TAYIIGQLQIQSRDWMEEYYAKVPQVLEAHGGRFLVRGGDPARMEGMDPTPDAAVVLEF CEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEC PDRAHAEAFWNSDAFQALAQLRRTGSSLNAILVDKLPDA CCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA