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The map label for this gene is yceJ [H]

Identifier: 99080890

GI number: 99080890

Start: 1127786

End: 1129018

Strand: Reverse

Name: yceJ [H]

Synonym: TM1040_1049

Alternate gene names: 99080890

Gene position: 1129018-1127786 (Counterclockwise)

Preceding gene: 99080915

Following gene: 99080886

Centisome position: 35.27

GC content: 61.56

Gene sequence:

>1233_bases
ATGTCGCGCCAAAACACCCCGCAGAGCTACGGCTCCATCACCAAGAGCTTTCACTGGCTCACCGCCCTCCTGATCCTGAC
CGCCTTTCCGCTTGGATATTTTGCGACCGAATTGGCAGAGCATATCCAGAGCAGCGCGTTTGACGGCTCCCAAGCGACGA
TTGATCGCGCTACGCTCTTGTTTTCGCTTCATAAAACCATTGGCGTTGCGGTGTTCTTTACCGCGCTCCTCCGCATCCTC
TGGGCCATCACCCAGGAAAAGCCGGGCCTGTTGCACCCGGATCGCAAGCTGGAGGCCTGGGCGGCAGAGACGGCCCATTG
GGTGCTCTATGGTGCGATGGTGATTGTGCCGCTTTCGGGCTGGATTCATCACGCCGCGACCGATGGGTTTGCGCCCATCT
GGTGGCCCTTTGGGCAAAACCTGCCGCTGGTGCCCAAATCCGAGTTTGTCTCCAAACTGTCTTCTTCGGTGCATTTCTAC
GCGATGCTGTTGCTTGGCGCGTCGATCCTGGCGCATGTGGGTGGCGCGCTCAAACATCATGTGATCGATAAAGACAGCAC
GTTGGTGCGCATGCTGCCGGGCCGTCGCGCTCTGCCCGAGCCGCCCGCACAACACCATTCTGCCTTGCCGCTGCTGACAG
CGCTCGTGGTCTGGGGCGCGGTGATCGGTGGCAGCACAATGCTCTTTCTAAACACCCAGAGCGCCAAAGGCACCGTGGCA
CCGGTGGCAGCTGCACCGGTTGAAGGCTCGGGCTGGACTGTCGAAAACGGAACGCTGGCGATCGAAGTGGTCCAGATGGG
CAGCGCCATCACGGGTACATTCTCCGACTGGCGCGCCAAGATCGACTTTGAAGAACCCGCCAGCCCCGGCCCGGCCGGTC
GTGTCGAGGTCGCCATTGCCATCCCATCGCTCACGCTCGGGTCTGTGACCGATCAGGCCATGGGGTCGGACTACTTTGAC
GCCGAGACCTATCCGCAGGCGACGTTTGAGGCCGAGATCATCCAGATCGAGGGCGCGCAGTACGAGGCAAAAGGCACGCT
CACCATTCGCGATCAGACGGTGGCGACCACCCTGCCCTTCACGCTCGATCTTGACGGGGATACGGCCACCATGAGCGGGC
GAACGGAGGTTAACCGTCTCGATTTCAACATCGGGACCGGCACGCAAGACGAGGGCACCCTGGCCTTTGGCGTCGACATC
ACGGTGGATCTGGTCGCGACACGCGCGCCCTGA

Upstream 100 bases:

>100_bases
CTTGCGTGCAGGCCCAGTGTCATTACCTTGGCTATAACACCCGGCCCCGCGTCCGGAGTCCTCTCATCCCAGGTTTCCTC
TCATCAAGGACAGATGTTCC

Downstream 100 bases:

>100_bases
GACGCACACCCCAGATCAAACGCTGGCGCGTAAATGCCGCTCCAAGCAAAAACCGCCGCGCTCCCATAAATGGGACGCGC
GGCGGCCTGTTTTCATGTCA

Product: cytochrome B561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSRQNTPQSYGSITKSFHWLTALLILTAFPLGYFATELAEHIQSSAFDGSQATIDRATLLFSLHKTIGVAVFFTALLRIL
WAITQEKPGLLHPDRKLEAWAAETAHWVLYGAMVIVPLSGWIHHAATDGFAPIWWPFGQNLPLVPKSEFVSKLSSSVHFY
AMLLLGASILAHVGGALKHHVIDKDSTLVRMLPGRRALPEPPAQHHSALPLLTALVVWGAVIGGSTMLFLNTQSAKGTVA
PVAAAPVEGSGWTVENGTLAIEVVQMGSAITGTFSDWRAKIDFEEPASPGPAGRVEVAIAIPSLTLGSVTDQAMGSDYFD
AETYPQATFEAEIIQIEGAQYEAKGTLTIRDQTVATTLPFTLDLDGDTATMSGRTEVNRLDFNIGTGTQDEGTLAFGVDI
TVDLVATRAP

Sequences:

>Translated_410_residues
MSRQNTPQSYGSITKSFHWLTALLILTAFPLGYFATELAEHIQSSAFDGSQATIDRATLLFSLHKTIGVAVFFTALLRIL
WAITQEKPGLLHPDRKLEAWAAETAHWVLYGAMVIVPLSGWIHHAATDGFAPIWWPFGQNLPLVPKSEFVSKLSSSVHFY
AMLLLGASILAHVGGALKHHVIDKDSTLVRMLPGRRALPEPPAQHHSALPLLTALVVWGAVIGGSTMLFLNTQSAKGTVA
PVAAAPVEGSGWTVENGTLAIEVVQMGSAITGTFSDWRAKIDFEEPASPGPAGRVEVAIAIPSLTLGSVTDQAMGSDYFD
AETYPQATFEAEIIQIEGAQYEAKGTLTIRDQTVATTLPFTLDLDGDTATMSGRTEVNRLDFNIGTGTQDEGTLAFGVDI
TVDLVATRAP
>Mature_409_residues
SRQNTPQSYGSITKSFHWLTALLILTAFPLGYFATELAEHIQSSAFDGSQATIDRATLLFSLHKTIGVAVFFTALLRILW
AITQEKPGLLHPDRKLEAWAAETAHWVLYGAMVIVPLSGWIHHAATDGFAPIWWPFGQNLPLVPKSEFVSKLSSSVHFYA
MLLLGASILAHVGGALKHHVIDKDSTLVRMLPGRRALPEPPAQHHSALPLLTALVVWGAVIGGSTMLFLNTQSAKGTVAP
VAAAPVEGSGWTVENGTLAIEVVQMGSAITGTFSDWRAKIDFEEPASPGPAGRVEVAIAIPSLTLGSVTDQAMGSDYFDA
ETYPQATFEAEIIQIEGAQYEAKGTLTIRDQTVATTLPFTLDLDGDTATMSGRTEVNRLDFNIGTGTQDEGTLAFGVDIT
VDLVATRAP

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=196, Percent_Identity=31.6326530612245, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 43960; Mature: 43828

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQNTPQSYGSITKSFHWLTALLILTAFPLGYFATELAEHIQSSAFDGSQATIDRATLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FSLHKTIGVAVFFTALLRILWAITQEKPGLLHPDRKLEAWAAETAHWVLYGAMVIVPLSG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEHEEECCH
WIHHAATDGFAPIWWPFGQNLPLVPKSEFVSKLSSSVHFYAMLLLGASILAHVGGALKHH
HHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VIDKDSTLVRMLPGRRALPEPPAQHHSALPLLTALVVWGAVIGGSTMLFLNTQSAKGTVA
CCCCCCCEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
PVAAAPVEGSGWTVENGTLAIEVVQMGSAITGTFSDWRAKIDFEEPASPGPAGRVEVAIA
EEEECCCCCCCEEEECCEEEEEEEECCCCEECCCHHHEEEECCCCCCCCCCCCEEEEEEE
IPSLTLGSVTDQAMGSDYFDAETYPQATFEAEIIQIEGAQYEAKGTLTIRDQTVATTLPF
ECCCEECCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCEEECCEEEEEECCEEEEECCE
TLDLDGDTATMSGRTEVNRLDFNIGTGTQDEGTLAFGVDITVDLVATRAP
EEEECCCEEECCCCCEEEEEEEECCCCCCCCCEEEEECEEEEEEEEECCC
>Mature Secondary Structure 
SRQNTPQSYGSITKSFHWLTALLILTAFPLGYFATELAEHIQSSAFDGSQATIDRATLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FSLHKTIGVAVFFTALLRILWAITQEKPGLLHPDRKLEAWAAETAHWVLYGAMVIVPLSG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEHEEECCH
WIHHAATDGFAPIWWPFGQNLPLVPKSEFVSKLSSSVHFYAMLLLGASILAHVGGALKHH
HHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VIDKDSTLVRMLPGRRALPEPPAQHHSALPLLTALVVWGAVIGGSTMLFLNTQSAKGTVA
CCCCCCCEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
PVAAAPVEGSGWTVENGTLAIEVVQMGSAITGTFSDWRAKIDFEEPASPGPAGRVEVAIA
EEEECCCCCCCEEEECCEEEEEEEECCCCEECCCHHHEEEECCCCCCCCCCCCEEEEEEE
IPSLTLGSVTDQAMGSDYFDAETYPQATFEAEIIQIEGAQYEAKGTLTIRDQTVATTLPF
ECCCEECCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCEEECCEEEEEECCEEEEECCE
TLDLDGDTATMSGRTEVNRLDFNIGTGTQDEGTLAFGVDITVDLVATRAP
EEEECCCEEECCCCCEEEEEEEECCCCCCCCCEEEEECEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]