| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080816
Identifier: 99080816
GI number: 99080816
Start: 1042474
End: 1042935
Strand: Direct
Name: 99080816
Synonym: TM1040_0975
Alternate gene names: NA
Gene position: 1042474-1042935 (Clockwise)
Preceding gene: 99080815
Following gene: 99080817
Centisome position: 32.57
GC content: 53.46
Gene sequence:
>462_bases ATGATGAAACGAATGAGAGTGACCTCACAAATAGCGGCCGCAATCTTCGGCCTCGCGTTTGCGGCCAAAGGGGCGTTGGC GGCGACCTATGATTGCAAAGTGACCAGGGCTGACATTCAACACCCCTATCTCGCTGAACGGGTCGTTTTCACAACGGATG CCCGGTTTCAGAAGATCACGATGACGAAAATCGACATCAAGGATGTATCGACGACTGTTGTGCCGGGGGAATTGGCCAAC CGGACCCGTAAACGCGTGCGTATCCGATTTCCGGCCCATAGTTTCGTGATGAACGGGCTGCTCCCACGGCAACCAGGAGC TTACAGTCGCCTGAAACCGTCTGAATATCTCTACGAGCTCTCAATCTCGCTTTCTGATCAACGGTACACAATGCGCGTTG TGGATGCCATCTTTGGTCTCAGTTATGGGGCGGGGTCTGGGCGTTGTAAGGTAAGCAATTGA
Upstream 100 bases:
>100_bases CGGCACCTGCAAAAGGTTGCGTTAAGTTATTTCTCGAAGGCGCTCGCGCCAAGATCGGCGTATTTTGGCGCGAAACACTG CACATAAAGAAGCAATTTGA
Downstream 100 bases:
>100_bases GTCTGGTTTTCCCGCTCTAGCACTTGACCAACGTCGCAGTGGGACGCATGTATCCCACAGGAACGCAACATTAATTGACA GGGGGCCACCATGGCTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MMKRMRVTSQIAAAIFGLAFAAKGALAATYDCKVTRADIQHPYLAERVVFTTDARFQKITMTKIDIKDVSTTVVPGELAN RTRKRVRIRFPAHSFVMNGLLPRQPGAYSRLKPSEYLYELSISLSDQRYTMRVVDAIFGLSYGAGSGRCKVSN
Sequences:
>Translated_153_residues MMKRMRVTSQIAAAIFGLAFAAKGALAATYDCKVTRADIQHPYLAERVVFTTDARFQKITMTKIDIKDVSTTVVPGELAN RTRKRVRIRFPAHSFVMNGLLPRQPGAYSRLKPSEYLYELSISLSDQRYTMRVVDAIFGLSYGAGSGRCKVSN >Mature_153_residues MMKRMRVTSQIAAAIFGLAFAAKGALAATYDCKVTRADIQHPYLAERVVFTTDARFQKITMTKIDIKDVSTTVVPGELAN RTRKRVRIRFPAHSFVMNGLLPRQPGAYSRLKPSEYLYELSISLSDQRYTMRVVDAIFGLSYGAGSGRCKVSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17087; Mature: 17087
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRMRVTSQIAAAIFGLAFAAKGALAATYDCKVTRADIQHPYLAERVVFTTDARFQKIT CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCHHCEEEEECCCCEEEEE MTKIDIKDVSTTVVPGELANRTRKRVRIRFPAHSFVMNGLLPRQPGAYSRLKPSEYLYEL EEEEECCCCCEEECCHHHHHHHHHEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEEE SISLSDQRYTMRVVDAIFGLSYGAGSGRCKVSN EEEECCCHHHHHHHHHHHHCCCCCCCCEEEECC >Mature Secondary Structure MMKRMRVTSQIAAAIFGLAFAAKGALAATYDCKVTRADIQHPYLAERVVFTTDARFQKIT CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCHHCEEEEECCCCEEEEE MTKIDIKDVSTTVVPGELANRTRKRVRIRFPAHSFVMNGLLPRQPGAYSRLKPSEYLYEL EEEEECCCCCEEECCHHHHHHHHHEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCEEEEE SISLSDQRYTMRVVDAIFGLSYGAGSGRCKVSN EEEECCCHHHHHHHHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA