| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080815
Identifier: 99080815
GI number: 99080815
Start: 1042009
End: 1042398
Strand: Direct
Name: 99080815
Synonym: TM1040_0974
Alternate gene names: NA
Gene position: 1042009-1042398 (Clockwise)
Preceding gene: 99080814
Following gene: 99080816
Centisome position: 32.55
GC content: 52.82
Gene sequence:
>390_bases TTGCAGGCGGCCCAGTTGAAATGCACGCTGTCAAAGGTGTGGTTTGCTCACCCTTTTCTGCCGTCCTCCTTGGTCCTTGA GGCAGATGAGCATTTCCTGAACGTCAAGCTGCGTGATGTTCAGATCAAGAACGTGGCAACCAGTGATACCTCTGCAAAGG TGGTATATCGCGGCCAAAATCGGTTGCGCCTTGAATGGCCCACTGCGGAGTACAGACGCACAGGTCCGGTGGCATTCCCC AATCGTAATGTAGACCGTGACGAAATCATCGACTACCGGCCAACGCTTTCTCTCAACCTAAAAAACCTGAAGTTTAAACT CGAGGTTCAGGACAGGGGAGAGGGTTTGCAACGGGGCCAAGGAGACGGCACCTGCAAAAGGTTGCGTTAA
Upstream 100 bases:
>100_bases GCTGTGCCAGCCGCGCCACAACGCACCTCTCATTTGGAGTAAGACCTTGAACTTCTTCAGCCTCTCTGCCGGGGTTGTAC TGCTATGTGCGGGGACCACC
Downstream 100 bases:
>100_bases GTTATTTCTCGAAGGCGCTCGCGCCAAGATCGGCGTATTTTGGCGCGAAACACTGCACATAAAGAAGCAATTTGAATGAT GAAACGAATGAGAGTGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MQAAQLKCTLSKVWFAHPFLPSSLVLEADEHFLNVKLRDVQIKNVATSDTSAKVVYRGQNRLRLEWPTAEYRRTGPVAFP NRNVDRDEIIDYRPTLSLNLKNLKFKLEVQDRGEGLQRGQGDGTCKRLR
Sequences:
>Translated_129_residues MQAAQLKCTLSKVWFAHPFLPSSLVLEADEHFLNVKLRDVQIKNVATSDTSAKVVYRGQNRLRLEWPTAEYRRTGPVAFP NRNVDRDEIIDYRPTLSLNLKNLKFKLEVQDRGEGLQRGQGDGTCKRLR >Mature_129_residues MQAAQLKCTLSKVWFAHPFLPSSLVLEADEHFLNVKLRDVQIKNVATSDTSAKVVYRGQNRLRLEWPTAEYRRTGPVAFP NRNVDRDEIIDYRPTLSLNLKNLKFKLEVQDRGEGLQRGQGDGTCKRLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14854; Mature: 14854
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAAQLKCTLSKVWFAHPFLPSSLVLEADEHFLNVKLRDVQIKNVATSDTSAKVVYRGQN CCCCCEEEEEEHHEEECCCCCCEEEEECCCEEEEEEEEEEEEEEEECCCCCEEEEEECCC RLRLEWPTAEYRRTGPVAFPNRNVDRDEIIDYRPTLSLNLKNLKFKLEVQDRGEGLQRGQ EEEEECCCHHHCCCCCEECCCCCCCHHHEEECCCCEEEEEECEEEEEEECCCCCCCCCCC GDGTCKRLR CCCCEECCC >Mature Secondary Structure MQAAQLKCTLSKVWFAHPFLPSSLVLEADEHFLNVKLRDVQIKNVATSDTSAKVVYRGQN CCCCCEEEEEEHHEEECCCCCCEEEEECCCEEEEEEEEEEEEEEEECCCCCEEEEEECCC RLRLEWPTAEYRRTGPVAFPNRNVDRDEIIDYRPTLSLNLKNLKFKLEVQDRGEGLQRGQ EEEEECCCHHHCCCCCEECCCCCCCHHHEEECCCCEEEEEECEEEEEEECCCCCCCCCCC GDGTCKRLR CCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA