Click here to switch to the map view.

The map label for this gene is 99080813

Identifier: 99080813

GI number: 99080813

Start: 1040768

End: 1041337

Strand: Direct

Name: 99080813

Synonym: TM1040_0972

Alternate gene names: NA

Gene position: 1040768-1041337 (Clockwise)

Preceding gene: 99080812

Following gene: 99080814

Centisome position: 32.51

GC content: 62.28

Gene sequence:

>570_bases
ATGTCTAAAGCTGTAAGTGCCATGAATGGGGCCAGTTTTGCGGGTCTGGCAAAGGTCGAGGAAACGGGTCTGGGGGGCAT
GATCACCCTGCGCGGCGACTTTGCCTCTGCTGCGTTCAAAGCTGCCGTCAAAACGGCGATTGGATGTGACGTGCCTGCCG
TGCGCAAGATCGCCTTTGGCGAACAGGGCGCGGCGGCCTGGATGTCCCCGGACGAGTTGTTGCTGCTGGTCGACTACGAC
ACTGCAGAAGCCGTGGTAGCACAGTTGAGCGACGCATTGGCGGGCGAGCACCATATGGCGGTGAACGTGTCCGATGCGCG
GGCGTGTTTCGCCGTGAGCGGTGAGGGCGCGCGCGAGGTGATCGCCAAGGTGGCACCGGTGGATCTGGACGCGGGTCAGT
TCGAGGCCGGAGATTTCCGTCGCACCCGCTTTGCACAGGTGGCGGGGGCCTTCTGGCGCGATGAGGCAGATGTCTTCCAC
ATCGTCTGTTTCCGCTCTGTTGCGGTCTATATGTTCAACCTCCTCAGCACCGCAGCGCATCCCCAGTCGAAGGTCGGCGT
CTACGCCTGA

Upstream 100 bases:

>100_bases
CGCATGGGCGAGGTGATCGACTTCCCCGGCCTTGATGGGAAAATCTACAAAGCCAAGATCGTCGACCCGATCTTCTATGA
CAAAGAAGGGGACAAGCAGA

Downstream 100 bases:

>100_bases
TCTGACGCTGACGCTATCGTGCAACAGTGCCTGTTTAATCCGATGGCGGCCTTCGCGAGGGCCGCCATTCTTTTTAGACA
ACAACCAATAGAAGAATTAA

Product: sarcosine oxidase, gamma subunit

Products: glycine; formaldehyde; H2O2

Alternate protein names: Sarcosine Oxidase Gamma Subunit Family; Sarcosine Oxidase Gamma Subunit Protein; Sarcosine Oxidase Subunit Gamma Family Protein; Sarcosine Oxidase Gamma Subunit Family Protein; Sarcosine Oxidase Subunit Gamma

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSKAVSAMNGASFAGLAKVEETGLGGMITLRGDFASAAFKAAVKTAIGCDVPAVRKIAFGEQGAAAWMSPDELLLLVDYD
TAEAVVAQLSDALAGEHHMAVNVSDARACFAVSGEGAREVIAKVAPVDLDAGQFEAGDFRRTRFAQVAGAFWRDEADVFH
IVCFRSVAVYMFNLLSTAAHPQSKVGVYA

Sequences:

>Translated_189_residues
MSKAVSAMNGASFAGLAKVEETGLGGMITLRGDFASAAFKAAVKTAIGCDVPAVRKIAFGEQGAAAWMSPDELLLLVDYD
TAEAVVAQLSDALAGEHHMAVNVSDARACFAVSGEGAREVIAKVAPVDLDAGQFEAGDFRRTRFAQVAGAFWRDEADVFH
IVCFRSVAVYMFNLLSTAAHPQSKVGVYA
>Mature_188_residues
SKAVSAMNGASFAGLAKVEETGLGGMITLRGDFASAAFKAAVKTAIGCDVPAVRKIAFGEQGAAAWMSPDELLLLVDYDT
AEAVVAQLSDALAGEHHMAVNVSDARACFAVSGEGAREVIAKVAPVDLDAGQFEAGDFRRTRFAQVAGAFWRDEADVFHI
VCFRSVAVYMFNLLSTAAHPQSKVGVYA

Specific function: Unknown

COG id: COG4583

COG function: function code E; Sarcosine oxidase gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.5.3.1

Molecular weight: Translated: 19822; Mature: 19690

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAVSAMNGASFAGLAKVEETGLGGMITLRGDFASAAFKAAVKTAIGCDVPAVRKIAFG
CCCHHHHCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHCC
EQGAAAWMSPDELLLLVDYDTAEAVVAQLSDALAGEHHMAVNVSDARACFAVSGEGAREV
CCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHH
IAKVAPVDLDAGQFEAGDFRRTRFAQVAGAFWRDEADVFHIVCFRSVAVYMFNLLSTAAH
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PQSKVGVYA
CCCCCCCCC
>Mature Secondary Structure 
SKAVSAMNGASFAGLAKVEETGLGGMITLRGDFASAAFKAAVKTAIGCDVPAVRKIAFG
CCHHHHCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHCC
EQGAAAWMSPDELLLLVDYDTAEAVVAQLSDALAGEHHMAVNVSDARACFAVSGEGAREV
CCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHH
IAKVAPVDLDAGQFEAGDFRRTRFAQVAGAFWRDEADVFHIVCFRSVAVYMFNLLSTAAH
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PQSKVGVYA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sarcosine; H2O; O2

Specific reaction: sarcosine + H2O + O2 = glycine + formaldehyde + H2O2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA