Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is 99080623
Identifier: 99080623
GI number: 99080623
Start: 836839
End: 837342
Strand: Reverse
Name: 99080623
Synonym: TM1040_0782
Alternate gene names: NA
Gene position: 837342-836839 (Counterclockwise)
Preceding gene: 99080624
Following gene: 99080622
Centisome position: 26.16
GC content: 63.49
Gene sequence:
>504_bases ATGTACTACCGCGCCAGGTGGGAAAACGGGTGCCTGCGCCTCCTGTCCAATCAGGGGCCGGAACTAACCGATGGCGAGCT TGTCACGGTCAGCATCGACCGGGACCGCAGCGGAAAGAGCCACCGGCACCAGTTCGCATGGATCAAGGACGCCTGGGCCA GCCTGCCGGAAGCCGTGATGCACATGCCGTGGGCTGAGACGCCAGAGGCGCTCCGGAAACACGCTTTGATCGCAACCGGG TTTTCACAGGTCTACACGCTGGACTGCGGGGCGAACGCCACAGCACGCCGCGTGAAGGAGGCCCTGCTGGCTGCGGAGGT CAAGGCGCACGGATACGCGCTAGGCCAAGTGCAGGGACCTGTGGTGCGCGTCTGGACGCCTGAGAGCCAATCGGTGCGCG CCATGGGCGGGGATCGCTTCAAGGAGAGCAAGAATGCGATTTTGGATTGGGTTTCAGCGCAGATCGGCGTGGCCCCAGAA GACCTAGGGAAACAAGCAGCATGA
Upstream 100 bases:
>100_bases ACTCAGAAAAGGCGAGAGAAATCACCGACGCCGTGCGTTCATTCCTGACCAGCGTCGACGATACCTTCGCCAAGCTGCGC ACCCTCCAGGAAGCCGCGTG
Downstream 100 bases:
>100_bases CCGACCTCATGGGACGTGGCCCGCTAGGCCTGAAAGGAGCAAAGCCTCCGACGCCGACCCGCAAGTCGATGAAGGCGAGC GGCCCGAAGATGACCAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MYYRARWENGCLRLLSNQGPELTDGELVTVSIDRDRSGKSHRHQFAWIKDAWASLPEAVMHMPWAETPEALRKHALIATG FSQVYTLDCGANATARRVKEALLAAEVKAHGYALGQVQGPVVRVWTPESQSVRAMGGDRFKESKNAILDWVSAQIGVAPE DLGKQAA
Sequences:
>Translated_167_residues MYYRARWENGCLRLLSNQGPELTDGELVTVSIDRDRSGKSHRHQFAWIKDAWASLPEAVMHMPWAETPEALRKHALIATG FSQVYTLDCGANATARRVKEALLAAEVKAHGYALGQVQGPVVRVWTPESQSVRAMGGDRFKESKNAILDWVSAQIGVAPE DLGKQAA >Mature_167_residues MYYRARWENGCLRLLSNQGPELTDGELVTVSIDRDRSGKSHRHQFAWIKDAWASLPEAVMHMPWAETPEALRKHALIATG FSQVYTLDCGANATARRVKEALLAAEVKAHGYALGQVQGPVVRVWTPESQSVRAMGGDRFKESKNAILDWVSAQIGVAPE DLGKQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18442; Mature: 18442
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYRARWENGCLRLLSNQGPELTDGELVTVSIDRDRSGKSHRHQFAWIKDAWASLPEAVM CCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH HMPWAETPEALRKHALIATGFSQVYTLDCGANATARRVKEALLAAEVKAHGYALGQVQGP HCCCCCCHHHHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC VVRVWTPESQSVRAMGGDRFKESKNAILDWVSAQIGVAPEDLGKQAA EEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCC >Mature Secondary Structure MYYRARWENGCLRLLSNQGPELTDGELVTVSIDRDRSGKSHRHQFAWIKDAWASLPEAVM CCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH HMPWAETPEALRKHALIATGFSQVYTLDCGANATARRVKEALLAAEVKAHGYALGQVQGP HCCCCCCHHHHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC VVRVWTPESQSVRAMGGDRFKESKNAILDWVSAQIGVAPEDLGKQAA EEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA