| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985929
Identifier: 94985929
GI number: 94985929
Start: 1942889
End: 1943401
Strand: Reverse
Name: 94985929
Synonym: Dgeo_1829
Alternate gene names: NA
Gene position: 1943401-1942889 (Counterclockwise)
Preceding gene: 94985930
Following gene: 94985928
Centisome position: 78.77
GC content: 66.86
Gene sequence:
>513_bases ATGACTGACCCGCGTTATCCTCTCGGGCCGATGCCTCAGCCCCTCACCCTCACGCCCGGGGAGAGACAGGAAGCCATCCG GATCATTCGCGTCCTTCCGGCTGAACTGCGCGCCACGGTTTCGGGTCAGCCGAACACGGTGCTGGATACCCCGTATCGGG ACGGTGGCTGGACGGTGCGGCAGGTCGTTCACCACATCGCAGACAGTCATATCAACGCAGTCGTTCGCCTGAAGCTCGCC CTGACTGAGGCCAACCCAACGGTGAAGCCCTACGAGGAGGGCGACTGGGCGAGGCTGCCGGACATGGCCTTGCCCGTTGA ACCCAGCCTGAGCCTGCTGGACGGCCTGCACGCACGCTGGGTCTGTGTCCTTGATGCCCTGACCGCCGAAGCGTGGACCC GCGAGTGGACGCACCCCGCGCAGGGGCGGACCTACACGGTGGACACGCTCGCCGCCATGTACGCCTGGCACGGGCGACAC CACCTCGCGCACATCCGCCGAGTGACGGGCTGA
Upstream 100 bases:
>100_bases CCAACGAGCGTGGCCTCAGCCTGGAGCGCGGCTTTACGCGCATGATGCGAAAGATCGAGACTCGCGACGCGGACCGCTGG ACGAAAAAGGAGGCGGGCCA
Downstream 100 bases:
>100_bases TGCAGCACGATGAGCGCATGTACGTCCCCGGCGAGCTGCACGTGGGCGGCGTGGTCATCCTGAATGAGCGCGGCGATATC CTGCTCGTGCGTGAACTCGG
Product: metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTDPRYPLGPMPQPLTLTPGERQEAIRIIRVLPAELRATVSGQPNTVLDTPYRDGGWTVRQVVHHIADSHINAVVRLKLA LTEANPTVKPYEEGDWARLPDMALPVEPSLSLLDGLHARWVCVLDALTAEAWTREWTHPAQGRTYTVDTLAAMYAWHGRH HLAHIRRVTG
Sequences:
>Translated_170_residues MTDPRYPLGPMPQPLTLTPGERQEAIRIIRVLPAELRATVSGQPNTVLDTPYRDGGWTVRQVVHHIADSHINAVVRLKLA LTEANPTVKPYEEGDWARLPDMALPVEPSLSLLDGLHARWVCVLDALTAEAWTREWTHPAQGRTYTVDTLAAMYAWHGRH HLAHIRRVTG >Mature_169_residues TDPRYPLGPMPQPLTLTPGERQEAIRIIRVLPAELRATVSGQPNTVLDTPYRDGGWTVRQVVHHIADSHINAVVRLKLAL TEANPTVKPYEEGDWARLPDMALPVEPSLSLLDGLHARWVCVLDALTAEAWTREWTHPAQGRTYTVDTLAAMYAWHGRHH LAHIRRVTG
Specific function: Possible metal-dependent hydrolase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metal hydrolase yfiT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19083; Mature: 18952
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPRYPLGPMPQPLTLTPGERQEAIRIIRVLPAELRATVSGQPNTVLDTPYRDGGWTVR CCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHEECCCCCCCEEECCCCCCCHHHH QVVHHIADSHINAVVRLKLALTEANPTVKPYEEGDWARLPDMALPVEPSLSLLDGLHARW HHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHH VCVLDALTAEAWTREWTHPAQGRTYTVDTLAAMYAWHGRHHLAHIRRVTG HHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure TDPRYPLGPMPQPLTLTPGERQEAIRIIRVLPAELRATVSGQPNTVLDTPYRDGGWTVR CCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHEECCCCCCCEEECCCCCCCHHHH QVVHHIADSHINAVVRLKLALTEANPTVKPYEEGDWARLPDMALPVEPSLSLLDGLHARW HHHHHHHHHHHCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHH VCVLDALTAEAWTREWTHPAQGRTYTVDTLAAMYAWHGRHHLAHIRRVTG HHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]