| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is mug [H]
Identifier: 94985818
GI number: 94985818
Start: 1826457
End: 1827044
Strand: Reverse
Name: mug [H]
Synonym: Dgeo_1718
Alternate gene names: 94985818
Gene position: 1827044-1826457 (Counterclockwise)
Preceding gene: 94985819
Following gene: 94985817
Centisome position: 74.05
GC content: 70.75
Gene sequence:
>588_bases ATGACTGAGGCGGGGTGGCCAGCGGGGGAGGACTACCTCGTCCCGGACGTGCTGCAAGAGGGCCTAACGCTGGTGCTGGT GGGCACGGCGCCCAGCCGCATCAGCGCGCGGGCAAAGGCGTACTACGCCAACCCCGAGAACAAGTTCTGGCGGGTGCTGG CCGAGACAGGCCTGACCCCTCGACAGCTTGCTCCCCGTGAATACCCCATCCTGCCGCAGTACGGCATCGGCCTGACGGAC GTTGCCAAACGGCACAGCGGCGTGGACGCGGCCCTCCCCGTGGAGGCCTGGGCACCCCACGAACTGCGCGAGAAAATCCG GCGCTACCGCCCGGCCATCGTCGCCTTTACCTCCAAGCGGGGAGCCTCGGAGACGCTGGGGGTGCCCACCGGCCGCTTGC CCTACGGCCCGCAGGTCGGGCGACTGGAGGGGGCAGAGGTCTGGGTGCTGCCCTCCACCAGCCCTCTGGGTCACACCCAC TTCCAGTTGGGGCCTTGGCAGGCACTCGCGGACCGGGTGCGCGCGCTGCGCCCCTCCGGGAACCGTGAGGCCAGGAGGAA CCCGGGAGCGCCGGAGCGCGTACCCTGA
Upstream 100 bases:
>100_bases CTCGCAGGGCTGGAATTCATGGCTGAGGACCGGCCGGGCTTCTGGGAGCGCAACGGCTACCACATGCGGGGCGATCCCTT CAAGGAGGAGCGCTACGACG
Downstream 100 bases:
>100_bases GGATATGGCTCTGCGCGTCCCCCGTCTGTCTTTTGCCGCCCGCACCGGCTTACGGGCGCTGCGTATGGAATGCGCCTGAT GGGGTGGAGGACTCGGCCGC
Product: uracil-DNA glycosylase superfamily protein
Products: NA
Alternate protein names: Double-strand-specific uracil glycosylase; Mismatch-specific uracil DNA-glycosylase; MUG [H]
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTEAGWPAGEDYLVPDVLQEGLTLVLVGTAPSRISARAKAYYANPENKFWRVLAETGLTPRQLAPREYPILPQYGIGLTD VAKRHSGVDAALPVEAWAPHELREKIRRYRPAIVAFTSKRGASETLGVPTGRLPYGPQVGRLEGAEVWVLPSTSPLGHTH FQLGPWQALADRVRALRPSGNREARRNPGAPERVP
Sequences:
>Translated_195_residues MTEAGWPAGEDYLVPDVLQEGLTLVLVGTAPSRISARAKAYYANPENKFWRVLAETGLTPRQLAPREYPILPQYGIGLTD VAKRHSGVDAALPVEAWAPHELREKIRRYRPAIVAFTSKRGASETLGVPTGRLPYGPQVGRLEGAEVWVLPSTSPLGHTH FQLGPWQALADRVRALRPSGNREARRNPGAPERVP >Mature_194_residues TEAGWPAGEDYLVPDVLQEGLTLVLVGTAPSRISARAKAYYANPENKFWRVLAETGLTPRQLAPREYPILPQYGIGLTDV AKRHSGVDAALPVEAWAPHELREKIRRYRPAIVAFTSKRGASETLGVPTGRLPYGPQVGRLEGAEVWVLPSTSPLGHTHF QLGPWQALADRVRALRPSGNREARRNPGAPERVP
Specific function: Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone o
COG id: COG3663
COG function: function code L; G:T/U mismatch-specific DNA glycosylase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TDG/mug DNA glycosylase family [H]
Homologues:
Organism=Homo sapiens, GI59853162, Length=150, Percent_Identity=30, Blast_Score=71, Evalue=6e-13, Organism=Escherichia coli, GI1789449, Length=154, Percent_Identity=31.1688311688312, Blast_Score=69, Evalue=2e-13, Organism=Drosophila melanogaster, GI21356805, Length=147, Percent_Identity=32.6530612244898, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015637 - InterPro: IPR005122 [H]
Pfam domain/function: PF03167 UDG [H]
EC number: =3.2.2.28 [H]
Molecular weight: Translated: 21412; Mature: 21280
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAGWPAGEDYLVPDVLQEGLTLVLVGTAPSRISARAKAYYANPENKFWRVLAETGLTP CCCCCCCCCCCCCCHHHHHCCCEEEEEECCCHHHHHHHHEEECCCCHHHHHHHHHCCCCH RQLAPREYPILPQYGIGLTDVAKRHSGVDAALPVEAWAPHELREKIRRYRPAIVAFTSKR HHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCC GASETLGVPTGRLPYGPQVGRLEGAEVWVLPSTSPLGHTHFQLGPWQALADRVRALRPSG CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCC NREARRNPGAPERVP CCCCCCCCCCCCCCC >Mature Secondary Structure TEAGWPAGEDYLVPDVLQEGLTLVLVGTAPSRISARAKAYYANPENKFWRVLAETGLTP CCCCCCCCCCCCCHHHHHCCCEEEEEECCCHHHHHHHHEEECCCCHHHHHHHHHCCCCH RQLAPREYPILPQYGIGLTDVAKRHSGVDAALPVEAWAPHELREKIRRYRPAIVAFTSKR HHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCC GASETLGVPTGRLPYGPQVGRLEGAEVWVLPSTSPLGHTHFQLGPWQALADRVRALRPSG CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCC NREARRNPGAPERVP CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA