| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is yhdN [H]
Identifier: 94985811
GI number: 94985811
Start: 1818154
End: 1819176
Strand: Reverse
Name: yhdN [H]
Synonym: Dgeo_1711
Alternate gene names: 94985811
Gene position: 1819176-1818154 (Counterclockwise)
Preceding gene: 94985813
Following gene: 94985810
Centisome position: 73.73
GC content: 64.42
Gene sequence:
>1023_bases ATGGAATACCGCAAGTTGCTCGGCACGGACCTGACCCTGAGTGCGGTCGGCTTCGGTGTCTGGACAGTCGGCACGACCTG GTGGGGTGTGAAGGACGAGGACATGGCGGTGAGGCTGCTGCGCCGCGCCTTTGACCTGGGCATCACCTTTTTTGACAACG CGGACACCTACGCCTCGGGTCGCGCGGAAGAGCTCCAGCGCCGTGCCCTGGGCGACGTGCGTGATCAGATTGTGATTGGC TCCAAGTTTGGCTACGACATCTATAACCACCCCGAACGTCCCGGCCAGCAGGAGCGCCCGCACGATTGGACGCCCGCCTA CCTCCGCAAGGCGCTCGAGGGCAGCCTCAGGCGTCTGGGCACCGACTACATCGACTATTACCAGCTGCACAACCCGCGGC TGGACGCCATCCGGAAAGATGACCTGTGGGCCGAGTTGGAGCAGCTCAAGGCGGAGGGTCTGATCCGCGCCTACGGCACC GCCCTTGGCCCCGCCCTGAACGAACGCCAGATCGAGGAAGGCATCGAGACCATCCGGTTGCGCCGCGCACCCACCCAGAT TATCTACAACCTGCTGGAGCAGGTGCTCGGCGAACAGATTCTCCCCGTCGCCGAGGAGGAGGGCGTGGGCGTGATGGCCC GCGTGCCGCATGCTTCTGGGCTGCTGGAAGGGTACATGACCCTCGATACCGAGTTCGAGCCGGGCGACCACCGCAACTGG CGCCTGACGACCAATGCCCGCCGTAAGGCCTGGATGGAAGACGGCCTGAAAAAGGTTGAACAGCTGCAGGCACAGTTTTT GGAGGGGCGCACCATCGGTCAGCTCGCGATCCAGTTTGCGCTGCGCTCTCCTGCGATGGCGAGCGTGCTGCCCAACATCT ACGACGAGAAGGGGCTAGAAGAGTACGCCGCGACCTTCGGCGCCGCGCCCCTGACAGACGCCGAATACGACGCTATCCAG GTCCTCTACCGCGACAACTTTGGCCTGCCCACCGACCTGCGCGGACAGGAGGTGGCCCGGTGA
Upstream 100 bases:
>100_bases CCACTCTGCAGCGCCCTCATCGCTGGGCCAGCTGTAGATGTGTTGCCGACCGTTCAGTCGGGGTGAAACGTCCCTCTGCG CCGGTGGAATAGTGAGGGCT
Downstream 100 bases:
>100_bases CCGACGAGCCGAAGCCGACGCAGACGGAAAACACGCCGCCCACGGGGGGGAGGCCCGGCGGTGCCCCCGGTGGCCGTCCC AGGATGATGGTGGACCTCGA
Product: aldo/keto reductase
Products: NA
Alternate protein names: GSP69; AKR11B [H]
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MEYRKLLGTDLTLSAVGFGVWTVGTTWWGVKDEDMAVRLLRRAFDLGITFFDNADTYASGRAEELQRRALGDVRDQIVIG SKFGYDIYNHPERPGQQERPHDWTPAYLRKALEGSLRRLGTDYIDYYQLHNPRLDAIRKDDLWAELEQLKAEGLIRAYGT ALGPALNERQIEEGIETIRLRRAPTQIIYNLLEQVLGEQILPVAEEEGVGVMARVPHASGLLEGYMTLDTEFEPGDHRNW RLTTNARRKAWMEDGLKKVEQLQAQFLEGRTIGQLAIQFALRSPAMASVLPNIYDEKGLEEYAATFGAAPLTDAEYDAIQ VLYRDNFGLPTDLRGQEVAR
Sequences:
>Translated_340_residues MEYRKLLGTDLTLSAVGFGVWTVGTTWWGVKDEDMAVRLLRRAFDLGITFFDNADTYASGRAEELQRRALGDVRDQIVIG SKFGYDIYNHPERPGQQERPHDWTPAYLRKALEGSLRRLGTDYIDYYQLHNPRLDAIRKDDLWAELEQLKAEGLIRAYGT ALGPALNERQIEEGIETIRLRRAPTQIIYNLLEQVLGEQILPVAEEEGVGVMARVPHASGLLEGYMTLDTEFEPGDHRNW RLTTNARRKAWMEDGLKKVEQLQAQFLEGRTIGQLAIQFALRSPAMASVLPNIYDEKGLEEYAATFGAAPLTDAEYDAIQ VLYRDNFGLPTDLRGQEVAR >Mature_340_residues MEYRKLLGTDLTLSAVGFGVWTVGTTWWGVKDEDMAVRLLRRAFDLGITFFDNADTYASGRAEELQRRALGDVRDQIVIG SKFGYDIYNHPERPGQQERPHDWTPAYLRKALEGSLRRLGTDYIDYYQLHNPRLDAIRKDDLWAELEQLKAEGLIRAYGT ALGPALNERQIEEGIETIRLRRAPTQIIYNLLEQVLGEQILPVAEEEGVGVMARVPHASGLLEGYMTLDTEFEPGDHRNW RLTTNARRKAWMEDGLKKVEQLQAQFLEGRTIGQLAIQFALRSPAMASVLPNIYDEKGLEEYAATFGAAPLTDAEYDAIQ VLYRDNFGLPTDLRGQEVAR
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=306, Percent_Identity=26.797385620915, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI27436964, Length=311, Percent_Identity=26.0450160771704, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI4504825, Length=304, Percent_Identity=26.6447368421053, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI27436962, Length=311, Percent_Identity=26.0450160771704, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI27436966, Length=311, Percent_Identity=25.7234726688103, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI27436971, Length=333, Percent_Identity=25.8258258258258, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1788070, Length=326, Percent_Identity=29.7546012269939, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1789375, Length=333, Percent_Identity=27.3273273273273, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI87081735, Length=321, Percent_Identity=26.791277258567, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788081, Length=210, Percent_Identity=31.9047619047619, Blast_Score=76, Evalue=2e-15, Organism=Caenorhabditis elegans, GI212645785, Length=166, Percent_Identity=30.1204819277108, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI24646155, Length=350, Percent_Identity=25.7142857142857, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24646159, Length=338, Percent_Identity=26.3313609467456, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38605; Mature: 38605
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYRKLLGTDLTLSAVGFGVWTVGTTWWGVKDEDMAVRLLRRAFDLGITFFDNADTYASG CCCHHHHCCCCCHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCC RAEELQRRALGDVRDQIVIGSKFGYDIYNHPERPGQQERPHDWTPAYLRKALEGSLRRLG CHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC TDYIDYYQLHNPRLDAIRKDDLWAELEQLKAEGLIRAYGTALGPALNERQIEEGIETIRL CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RRAPTQIIYNLLEQVLGEQILPVAEEEGVGVMARVPHASGLLEGYMTLDTEFEPGDHRNW HCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHEECCCCCCCCCCCE RLTTNARRKAWMEDGLKKVEQLQAQFLEGRTIGQLAIQFALRSPAMASVLPNIYDEKGLE EEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHH EYAATFGAAPLTDAEYDAIQVLYRDNFGLPTDLRGQEVAR HHHHHHCCCCCCCCCHHHHEEEEECCCCCCCCCCCHHCCC >Mature Secondary Structure MEYRKLLGTDLTLSAVGFGVWTVGTTWWGVKDEDMAVRLLRRAFDLGITFFDNADTYASG CCCHHHHCCCCCHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCC RAEELQRRALGDVRDQIVIGSKFGYDIYNHPERPGQQERPHDWTPAYLRKALEGSLRRLG CHHHHHHHHHHHHHHHEEECCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC TDYIDYYQLHNPRLDAIRKDDLWAELEQLKAEGLIRAYGTALGPALNERQIEEGIETIRL CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RRAPTQIIYNLLEQVLGEQILPVAEEEGVGVMARVPHASGLLEGYMTLDTEFEPGDHRNW HCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHEECCCCCCCCCCCE RLTTNARRKAWMEDGLKKVEQLQAQFLEGRTIGQLAIQFALRSPAMASVLPNIYDEKGLE EEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHH EYAATFGAAPLTDAEYDAIQVLYRDNFGLPTDLRGQEVAR HHHHHHCCCCCCCCCHHHHEEEEECCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 9298659 [H]