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The map label for this gene is yxkH [H]

Identifier: 94985759

GI number: 94985759

Start: 1762510

End: 1763799

Strand: Reverse

Name: yxkH [H]

Synonym: Dgeo_1659

Alternate gene names: 94985759

Gene position: 1763799-1762510 (Counterclockwise)

Preceding gene: 94985762

Following gene: 94985758

Centisome position: 71.49

GC content: 70.7

Gene sequence:

>1290_bases
ATGATGCGGCTGCTGTTCCGGTGTCTGATCCTGCTGTTCCTGCTGGCTCTGTCTGCCCCGGTGCAGGCGGGGAATCTGAC
CCTGGTCTATCACCAGATCGGCGGGAAGGGAGGTGTGACGCTGGGTCTGCCGGCGGAGACGCTGCGGCGGCGGGTGCTGG
CCTTGCGGGCACGCGGCTACCGCTTCGTGACGAGCAGCCAGGCTCTGAATGCCCCCAGTGGGGTCAAGACCGCTACGCTG
CGCTTTGACGACGGGTTCGAGAGCGTCTACCGCGAGGCCTTTCCGGTGCTGCAGGCGCTGGGCGTGCCGGGCACCGTGTA
CCCGATCCTCGACCTGATCGGGCAGCCCGGCCATATGACGCAGGCGCAGCTGGATGAGCTGCGGGCCGCTGGGTGGGAGA
TTGGGTCGCACACGCACACCCACGCTGCGCTGATTGACCTGACTCCCGGCGGTCTGTCCCGAGAACTTGACCCGGGGGGG
CAGCCCCTGGCCTGTGTCGCCTATCCCTTCTACCTTCAGGATGCGCGGGTGCGCCGAGCGGCTCAGCAGACCTTCGCCTG
CGGGGCGGGGGGCGCCTTTGGTGTGCGGGGGGAACGCTACGCCCTGCCGGGTCCCCTCGCCTCCCCCTGGGACGATTGGC
TGCTGCCGCTGCGGGCCGCGTCGGGCCTGGACCTGCGGGTGCCCGTGCTGCTCGCTCTGGGGGGCAATATTCTGCTGGAT
CCGCCGGGTGCCGCTCCAGCGACCCCGCCCCTGTGGAACCCGGCCACCTTCGAACTGCTGGGCTCGGGCAGCCTGAGCTT
GGGCTGGCAGGCGGGTGTGCGAGATACGCGGCTGCTGGTCCGGCAGCAGAACTGGGTGCTGGGCCTGAACTTCCTGCGGG
GCCGGGAGACCTACAGCGGCGCCACGCTCGCCTACCAGCTCCACCCGTTGACGCTGGCCGCCGGATACGGCACGCGTGGC
CCGGTTGTGGGTGCGGCCTTCGCGCTCGGTGGCTACGGGGAGGTGTGGGGCCGGTACCTGGCGGGCACTGCGGCGGTGGG
CGCGGAGGTGATCCCGCTCGACTACCTGCGGCTGCGGGCGGAGTATGTCCTGACCCCGTCCGCCCTGCGGGGTGAGGCGC
AATACGCCCTGCCACTGCTGCCCGGCGAGGGCCGCCCACTGCGGGTTCTGCTGGGCTTTGACCAGGGCTGGTACGCGGGC
AGCACCGTCCGGCTGGGTGCCCACTCCGCCACGCTGATTTCGCGGCTGGACCGTCCCGCGTTCGGCGTGCGGATACAGAC
CCTGTGGTGA

Upstream 100 bases:

>100_bases
GTCGAAGAAGGCGGGGGAAAGCGGTGTGGCCATCACCCGTAGGATACGTGAGAGAAGAAGCAGCCCACCGCCAGAACCTC
AAGAGAACCTTATAGTTCTC

Downstream 100 bases:

>100_bases
GGCTGGCCCAGCTGAGTAGGGGGAAGGTCAAAGGTCAGCGAAGCCTCAACGTTGCCTTGTCCAGCAGGGGCGGCTGGGCC
GTACGCTGCGGGGCAGTCAA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MMRLLFRCLILLFLLALSAPVQAGNLTLVYHQIGGKGGVTLGLPAETLRRRVLALRARGYRFVTSSQALNAPSGVKTATL
RFDDGFESVYREAFPVLQALGVPGTVYPILDLIGQPGHMTQAQLDELRAAGWEIGSHTHTHAALIDLTPGGLSRELDPGG
QPLACVAYPFYLQDARVRRAAQQTFACGAGGAFGVRGERYALPGPLASPWDDWLLPLRAASGLDLRVPVLLALGGNILLD
PPGAAPATPPLWNPATFELLGSGSLSLGWQAGVRDTRLLVRQQNWVLGLNFLRGRETYSGATLAYQLHPLTLAAGYGTRG
PVVGAAFALGGYGEVWGRYLAGTAAVGAEVIPLDYLRLRAEYVLTPSALRGEAQYALPLLPGEGRPLRVLLGFDQGWYAG
STVRLGAHSATLISRLDRPAFGVRIQTLW

Sequences:

>Translated_429_residues
MMRLLFRCLILLFLLALSAPVQAGNLTLVYHQIGGKGGVTLGLPAETLRRRVLALRARGYRFVTSSQALNAPSGVKTATL
RFDDGFESVYREAFPVLQALGVPGTVYPILDLIGQPGHMTQAQLDELRAAGWEIGSHTHTHAALIDLTPGGLSRELDPGG
QPLACVAYPFYLQDARVRRAAQQTFACGAGGAFGVRGERYALPGPLASPWDDWLLPLRAASGLDLRVPVLLALGGNILLD
PPGAAPATPPLWNPATFELLGSGSLSLGWQAGVRDTRLLVRQQNWVLGLNFLRGRETYSGATLAYQLHPLTLAAGYGTRG
PVVGAAFALGGYGEVWGRYLAGTAAVGAEVIPLDYLRLRAEYVLTPSALRGEAQYALPLLPGEGRPLRVLLGFDQGWYAG
STVRLGAHSATLISRLDRPAFGVRIQTLW
>Mature_429_residues
MMRLLFRCLILLFLLALSAPVQAGNLTLVYHQIGGKGGVTLGLPAETLRRRVLALRARGYRFVTSSQALNAPSGVKTATL
RFDDGFESVYREAFPVLQALGVPGTVYPILDLIGQPGHMTQAQLDELRAAGWEIGSHTHTHAALIDLTPGGLSRELDPGG
QPLACVAYPFYLQDARVRRAAQQTFACGAGGAFGVRGERYALPGPLASPWDDWLLPLRAASGLDLRVPVLLALGGNILLD
PPGAAPATPPLWNPATFELLGSGSLSLGWQAGVRDTRLLVRQQNWVLGLNFLRGRETYSGATLAYQLHPLTLAAGYGTRG
PVVGAAFALGGYGEVWGRYLAGTAAVGAEVIPLDYLRLRAEYVLTPSALRGEAQYALPLLPGEGRPLRVLLGFDQGWYAG
STVRLGAHSATLISRLDRPAFGVRIQTLW

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 45901; Mature: 45901

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRLLFRCLILLFLLALSAPVQAGNLTLVYHQIGGKGGVTLGLPAETLRRRVLALRARGY
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCE
RFVTSSQALNAPSGVKTATLRFDDGFESVYREAFPVLQALGVPGTVYPILDLIGQPGHMT
EEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
QAQLDELRAAGWEIGSHTHTHAALIDLTPGGLSRELDPGGQPLACVAYPFYLQDARVRRA
HHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHH
AQQTFACGAGGAFGVRGERYALPGPLASPWDDWLLPLRAASGLDLRVPVLLALGGNILLD
HHHHHCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCEEEC
PPGAAPATPPLWNPATFELLGSGSLSLGWQAGVRDTRLLVRQQNWVLGLNFLRGRETYSG
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHEEEEEECCEEEEEEECCCCCCCCC
ATLAYQLHPLTLAAGYGTRGPVVGAAFALGGYGEVWGRYLAGTAAVGAEVIPLDYLRLRA
CEEEEEEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHH
EYVLTPSALRGEAQYALPLLPGEGRPLRVLLGFDQGWYAGSTVRLGAHSATLISRLDRPA
HEEECCHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHCCCCC
FGVRIQTLW
CCEEEEEEC
>Mature Secondary Structure
MMRLLFRCLILLFLLALSAPVQAGNLTLVYHQIGGKGGVTLGLPAETLRRRVLALRARGY
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHCCE
RFVTSSQALNAPSGVKTATLRFDDGFESVYREAFPVLQALGVPGTVYPILDLIGQPGHMT
EEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
QAQLDELRAAGWEIGSHTHTHAALIDLTPGGLSRELDPGGQPLACVAYPFYLQDARVRRA
HHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHH
AQQTFACGAGGAFGVRGERYALPGPLASPWDDWLLPLRAASGLDLRVPVLLALGGNILLD
HHHHHCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCEEEC
PPGAAPATPPLWNPATFELLGSGSLSLGWQAGVRDTRLLVRQQNWVLGLNFLRGRETYSG
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHEEEEEECCEEEEEEECCCCCCCCC
ATLAYQLHPLTLAAGYGTRGPVVGAAFALGGYGEVWGRYLAGTAAVGAEVIPLDYLRLRA
CEEEEEEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHH
EYVLTPSALRGEAQYALPLLPGEGRPLRVLLGFDQGWYAGSTVRLGAHSATLISRLDRPA
HEEECCHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHCCCCC
FGVRIQTLW
CCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]