| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is argC
Identifier: 94985704
GI number: 94985704
Start: 1706008
End: 1706973
Strand: Reverse
Name: argC
Synonym: Dgeo_1604
Alternate gene names: 94985704
Gene position: 1706973-1706008 (Counterclockwise)
Preceding gene: 94985705
Following gene: 94985700
Centisome position: 69.19
GC content: 68.32
Gene sequence:
>966_bases ATGACTCCCCCCCGCATCTTTATCGACGGCGAGGCCGGAACGACTGGTCTGCAGATCCGCGCCCGGTTAGAGGGCCGCGA AGACCTGGAACTCCTGAGCATCGACCCCGCCCGCCGCAAGGACCCCGAAGCTCGCCGCGAATTGCTGAACGCTGCCGATA TCGCTGTCCTGTGCCTCCATGACGACGTGGCGCGGGAAGCTGTGGCGATGATCGAGAACCCGGCCACGCGTGTGCTGGAC GCGAGCAGCGCCCACCGCACGGCCCAGGGGTGGGCCTACGGTTTTCCCGAACTGACCAAGCAGAGCCGCGAGGAGATTCG CGCCGCCCGATTGGTCAGCAATCCGGGCTGCTACGCGACCGGCGCGGTAGCCCTGCTGCGGCCCCTCACCGACGCGGGCT TGCTGCCGCCCGACTTGCCCCTCAGCGTGCAGGGCTTTTCCGGCTACTCGGGCGGAGGCCGCGCGCTCGTGGAAGCCCAC GAAGGTCGGGGCGAGCATCCGATGGCCGGGCCATTCAAGAGCTACGCCCTCTCGCTCATCCACAAGCACCAGCCCGAGAT GGCACGGCACGGCGGCCTGAAGCACGCACCCCTCTTCACGCCGCATGTGGGCGGCTGGCGGCAAGGGATGCTCGTGCAGA TTCCGCTGCATCTGGGGCTGCTGGGCGTGACGGCAGCGCAGCTGCACGAGGCCCTGGCCGATCACTACGCCGGAGAGCGC TTCGTGCGGGTGATGCCCTTCGAGCACGGCCAGCCCGCCGACCCCATCCTCGACCCGCAGACGCTCAACGGCACCAATGA ACTCGAACTCTTCGTGTATGCCGGCCCAAACGGCGAGCATGCCCTGCTGGTCTCGCGGCTGGACAATCTGGGCAAGGGGG CGAGCGGCGCGGCGGTGCAAAACCTCGACGTGATGTTGGGGTTAGAAGGGGCGGGGCACAGTTACCGGCTGGCGGAGGGG GGCTGA
Upstream 100 bases:
>100_bases CCGCGTCTTTGACCAGGCCGAAAACCGCCTCCACGCGCAAAAGGCGCTGCTGTATCACGTGATGGGCGAGATGAAGCCCC GTTGGTAGGGTAGACCTGAG
Downstream 100 bases:
>100_bases CCGTCAGTCCTGTGTCAGGTGGGACGTGACCTGAATCTCCCCGTACGCTTCCCTCTGCTCGGCGCTGAAGCTCCCCTCCT TGACGCCCTCCAGCAGCGCG
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTPPRIFIDGEAGTTGLQIRARLEGREDLELLSIDPARRKDPEARRELLNAADIAVLCLHDDVAREAVAMIENPATRVLD ASSAHRTAQGWAYGFPELTKQSREEIRAARLVSNPGCYATGAVALLRPLTDAGLLPPDLPLSVQGFSGYSGGGRALVEAH EGRGEHPMAGPFKSYALSLIHKHQPEMARHGGLKHAPLFTPHVGGWRQGMLVQIPLHLGLLGVTAAQLHEALADHYAGER FVRVMPFEHGQPADPILDPQTLNGTNELELFVYAGPNGEHALLVSRLDNLGKGASGAAVQNLDVMLGLEGAGHSYRLAEG G
Sequences:
>Translated_321_residues MTPPRIFIDGEAGTTGLQIRARLEGREDLELLSIDPARRKDPEARRELLNAADIAVLCLHDDVAREAVAMIENPATRVLD ASSAHRTAQGWAYGFPELTKQSREEIRAARLVSNPGCYATGAVALLRPLTDAGLLPPDLPLSVQGFSGYSGGGRALVEAH EGRGEHPMAGPFKSYALSLIHKHQPEMARHGGLKHAPLFTPHVGGWRQGMLVQIPLHLGLLGVTAAQLHEALADHYAGER FVRVMPFEHGQPADPILDPQTLNGTNELELFVYAGPNGEHALLVSRLDNLGKGASGAAVQNLDVMLGLEGAGHSYRLAEG G >Mature_320_residues TPPRIFIDGEAGTTGLQIRARLEGREDLELLSIDPARRKDPEARRELLNAADIAVLCLHDDVAREAVAMIENPATRVLDA SSAHRTAQGWAYGFPELTKQSREEIRAARLVSNPGCYATGAVALLRPLTDAGLLPPDLPLSVQGFSGYSGGGRALVEAHE GRGEHPMAGPFKSYALSLIHKHQPEMARHGGLKHAPLFTPHVGGWRQGMLVQIPLHLGLLGVTAAQLHEALADHYAGERF VRVMPFEHGQPADPILDPQTLNGTNELELFVYAGPNGEHALLVSRLDNLGKGASGAAVQNLDVMLGLEGAGHSYRLAEGG
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 2 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=319, Percent_Identity=28.2131661442006, Blast_Score=87, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6320913, Length=332, Percent_Identity=28.9156626506024, Blast_Score=95, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_DEIGD (Q1IXY5)
Other databases:
- EMBL: CP000359 - RefSeq: YP_605068.1 - ProteinModelPortal: Q1IXY5 - SMR: Q1IXY5 - STRING: Q1IXY5 - GeneID: 4057295 - GenomeReviews: CP000359_GR - KEGG: dge:Dgeo_1604 - NMPDR: fig|68909.1.peg.2850 - eggNOG: COG0002 - HOGENOM: HBG294213 - OMA: PIFVPSV - ProtClustDB: PRK11863 - BioCyc: DGEO319795:DGEO_1604-MONOMER - GO: GO:0005737 - HAMAP: MF_01110 - InterPro: IPR023013 - InterPro: IPR010136 - InterPro: IPR016040 - InterPro: IPR000534 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01851
Pfam domain/function: PF01118 Semialdhyde_dh
EC number: =1.2.1.38
Molecular weight: Translated: 34391; Mature: 34259
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS01224 ARGC
Important sites: ACT_SITE 117-117
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPRIFIDGEAGTTGLQIRARLEGREDLELLSIDPARRKDPEARRELLNAADIAVLCLH CCCCEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEEEEC DDVAREAVAMIENPATRVLDASSAHRTAQGWAYGFPELTKQSREEIRAARLVSNPGCYAT CHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH GAVALLRPLTDAGLLPPDLPLSVQGFSGYSGGGRALVEAHEGRGEHPMAGPFKSYALSLI HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH HKHQPEMARHGGLKHAPLFTPHVGGWRQGMLVQIPLHLGLLGVTAAQLHEALADHYAGER HHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCE FVRVMPFEHGQPADPILDPQTLNGTNELELFVYAGPNGEHALLVSRLDNLGKGASGAAVQ EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHCCCCCCCEEE NLDVMLGLEGAGHSYRLAEGG CEEEEEEECCCCCEEEECCCC >Mature Secondary Structure TPPRIFIDGEAGTTGLQIRARLEGREDLELLSIDPARRKDPEARRELLNAADIAVLCLH CCCEEEEECCCCCCCEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEEEEC DDVAREAVAMIENPATRVLDASSAHRTAQGWAYGFPELTKQSREEIRAARLVSNPGCYAT CHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH GAVALLRPLTDAGLLPPDLPLSVQGFSGYSGGGRALVEAHEGRGEHPMAGPFKSYALSLI HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH HKHQPEMARHGGLKHAPLFTPHVGGWRQGMLVQIPLHLGLLGVTAAQLHEALADHYAGER HHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCE FVRVMPFEHGQPADPILDPQTLNGTNELELFVYAGPNGEHALLVSRLDNLGKGASGAAVQ EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHCCCCCCCEEE NLDVMLGLEGAGHSYRLAEGG CEEEEEEECCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA