| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is fusA [H]
Identifier: 94985553
GI number: 94985553
Start: 1540618
End: 1542651
Strand: Reverse
Name: fusA [H]
Synonym: Dgeo_1453
Alternate gene names: 94985553
Gene position: 1542651-1540618 (Counterclockwise)
Preceding gene: 94985559
Following gene: 94985552
Centisome position: 62.53
GC content: 67.65
Gene sequence:
>2034_bases ATGCCGTCTGAGTCCGTTGTCCCCGAAAACACTCCCGTTCGGGTTGTGAGTCTTGCCGGCCACAGCGGCGCGGGAAAAAC CACCCTCGCGGAGGCCCTGCTCGTCGCCAGCGGGGCCTTGCTCCGGGCGGGCCGGGTCACCGAAGGCACCACCCAGAGTG ATCACACCGACGCCGAGAAACAGCACGGGTTTTCCATCACGACCGGGGTGCTGCGGCTGAGTCAGGGTGGTACGGACATC ACGCTGCTCGACACGCCGGGCTACGCCGACTTCGTGCGGGAGATTCGCGGCGGCATTCGCGCGGCGGACTCCGTGCTGAT GGTGGTCAGCGCCGTGAGCGGCGTGGAGGTCGGCACCGAGCGGGTCTGGGCCACCGCTGACCGCTTCGAAATGCCGCGCC TCGTGGTGATCTCCAAGATGGACCGCGAACGCGCCAACTTCCACGCGGTCCTGGCCGATCTCCGTGCCAGCTTGCGGGGT CCGGTGGCAGCGGCGTACCTGCCGGTGGGCGAGGGGCCAGCATTCCGGGGCGTGGTGGATGTGCTGACAGCAGCTCCCGA CGAGCTGCCCGGCGAGCTGCGCCCTGCGCTCAACGAGGCCCGCGAGGCGCTGGTGGACGCCATTGTCGAAACCGACGATG ACCTCATGAACCGGTACCTGGAAGGAGAGGCGATCGGCACGGAGGAGTTGCGTGCGGCGTTGTTGCGCGCTGTTCACGCA GGGAGGCTCTACCCGGTCGTTCCGGTGAGCGCTGAGACCGGCGTGGGCGTGCCCGAGCTGCTCAACCTGATGGTGGTGGG GCTGCGGAGTGCCTCCGAACGTGGCGTGCTGACCGGGGTGGACGGGCAGACGCGCGAGCCCACACCGAACGCGCCTGCCA GTGCCCGCGTGTGGCGCGTCAGCGTGGACCCCTTTGTGGGCAAGCTGGCCTATATCCGTGTTTGGAGCGGCACCATCCGC CCCGGCGACACGCTGCGCAACACGACGCGCGGCGTGGACGTGAAGCCCGCCCACCTGTATGTGGTGAGCGGCAAGGACCT CACCGAGGTGTCCGAACTGCGCGCCGGGATGATCGGCGTGCTGACCAAAATCCCCGAGCTGCACACTGGCGACACCCTGG CCGACCCCGCTCACCCCATTGAGTACGACCCCCTGGTGCTGCCCGACCCGGCTCATACCGTGGCCCTCTTTCCCAAGACC CGCCAGGACGAGGACCGCCTCAGCAGCGCCATCGGCCGTCTTCTCGACGAGGATCCCACCCTGCGCTTTGCGCGCGAGGG GCAGACCGGCGAGCTGCTCCTCTCCGGGATGGGTGACATGCACACGACCATCGCGGTGGAGAAGCTCGCCGCACTCGGCG TGAATGTGGACACGGGTGTTCCGCAGATTCCCTACCGCGAAACCATCCGCGCTGTCTCGCAGGCCCAGGGCAAGCACAAG AAGCAGTCGGGTGGACACGGCCAGTACGGCGACTGCCATCTGCGTGTGGAGCCGCGTGAGGGCTTCAGCTTCTGCTCGGA GGTGGTGGGCGGCGCCATTCCCGGCAAGTACCTCCCCAGCATCGAGAAGGGTGTGCAAGACGCCATGCAGAAGGGGCCAC TGGCGGGTTACCCGATGCAGGACGTTCACGTAGCCGTCACCCACGGGTCCTACCACGACGTGGACTCCAGCGACCTCGCC TTCCGCACCGCTGGGGCGCTGGCCTTCCGCAACGCGGTGGAGGGGGCCAAACCGGTCTTGCTTGAGCCGGTGATGCTTCT CAAGGTGCGTGCCCCCGCTCAGTTCACTGGCGACCTGATCGGTGACCTTCAGACCCGCCGTGCCCGCGTGCAGGGGATGG ACCCCGCAGGGACCGTGATCACCATCACTGCCGTCGTCCCGCAGTCGGAGTTGCAGACCTACAGCGCCGACCTGCGCTCC ATGACGGGTGACCGGGGTGCCTTCAGCGTGAAGCCCGCTGGCTACCAGGACCTTCCCGAACACCTGGCCAAGAAGGTGAT CGAGGCGCGCAAGGCGGCGAGCCTTTCATCGTAA
Upstream 100 bases:
>100_bases ATGCTCCTCATACCTCCAACTGGTTCACTCGTCTGGTGGCCGTTCGTCTGCCCTCCTCTTTTCTGGCTGCACTGCTCTGG AAAGGGTCCGGTGATGTGGA
Downstream 100 bases:
>100_bases GGGATCTGTGAGCTGTCGACTCGGAGAATGAGACCAGCAGGTGACGCCCAGTGCCTCACGGTGCAGAGCACCTCACACAG AGACTCCCGTACACCGGGAG
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 677; Mature: 676
Protein sequence:
>677_residues MPSESVVPENTPVRVVSLAGHSGAGKTTLAEALLVASGALLRAGRVTEGTTQSDHTDAEKQHGFSITTGVLRLSQGGTDI TLLDTPGYADFVREIRGGIRAADSVLMVVSAVSGVEVGTERVWATADRFEMPRLVVISKMDRERANFHAVLADLRASLRG PVAAAYLPVGEGPAFRGVVDVLTAAPDELPGELRPALNEAREALVDAIVETDDDLMNRYLEGEAIGTEELRAALLRAVHA GRLYPVVPVSAETGVGVPELLNLMVVGLRSASERGVLTGVDGQTREPTPNAPASARVWRVSVDPFVGKLAYIRVWSGTIR PGDTLRNTTRGVDVKPAHLYVVSGKDLTEVSELRAGMIGVLTKIPELHTGDTLADPAHPIEYDPLVLPDPAHTVALFPKT RQDEDRLSSAIGRLLDEDPTLRFAREGQTGELLLSGMGDMHTTIAVEKLAALGVNVDTGVPQIPYRETIRAVSQAQGKHK KQSGGHGQYGDCHLRVEPREGFSFCSEVVGGAIPGKYLPSIEKGVQDAMQKGPLAGYPMQDVHVAVTHGSYHDVDSSDLA FRTAGALAFRNAVEGAKPVLLEPVMLLKVRAPAQFTGDLIGDLQTRRARVQGMDPAGTVITITAVVPQSELQTYSADLRS MTGDRGAFSVKPAGYQDLPEHLAKKVIEARKAASLSS
Sequences:
>Translated_677_residues MPSESVVPENTPVRVVSLAGHSGAGKTTLAEALLVASGALLRAGRVTEGTTQSDHTDAEKQHGFSITTGVLRLSQGGTDI TLLDTPGYADFVREIRGGIRAADSVLMVVSAVSGVEVGTERVWATADRFEMPRLVVISKMDRERANFHAVLADLRASLRG PVAAAYLPVGEGPAFRGVVDVLTAAPDELPGELRPALNEAREALVDAIVETDDDLMNRYLEGEAIGTEELRAALLRAVHA GRLYPVVPVSAETGVGVPELLNLMVVGLRSASERGVLTGVDGQTREPTPNAPASARVWRVSVDPFVGKLAYIRVWSGTIR PGDTLRNTTRGVDVKPAHLYVVSGKDLTEVSELRAGMIGVLTKIPELHTGDTLADPAHPIEYDPLVLPDPAHTVALFPKT RQDEDRLSSAIGRLLDEDPTLRFAREGQTGELLLSGMGDMHTTIAVEKLAALGVNVDTGVPQIPYRETIRAVSQAQGKHK KQSGGHGQYGDCHLRVEPREGFSFCSEVVGGAIPGKYLPSIEKGVQDAMQKGPLAGYPMQDVHVAVTHGSYHDVDSSDLA FRTAGALAFRNAVEGAKPVLLEPVMLLKVRAPAQFTGDLIGDLQTRRARVQGMDPAGTVITITAVVPQSELQTYSADLRS MTGDRGAFSVKPAGYQDLPEHLAKKVIEARKAASLSS >Mature_676_residues PSESVVPENTPVRVVSLAGHSGAGKTTLAEALLVASGALLRAGRVTEGTTQSDHTDAEKQHGFSITTGVLRLSQGGTDIT LLDTPGYADFVREIRGGIRAADSVLMVVSAVSGVEVGTERVWATADRFEMPRLVVISKMDRERANFHAVLADLRASLRGP VAAAYLPVGEGPAFRGVVDVLTAAPDELPGELRPALNEAREALVDAIVETDDDLMNRYLEGEAIGTEELRAALLRAVHAG RLYPVVPVSAETGVGVPELLNLMVVGLRSASERGVLTGVDGQTREPTPNAPASARVWRVSVDPFVGKLAYIRVWSGTIRP GDTLRNTTRGVDVKPAHLYVVSGKDLTEVSELRAGMIGVLTKIPELHTGDTLADPAHPIEYDPLVLPDPAHTVALFPKTR QDEDRLSSAIGRLLDEDPTLRFAREGQTGELLLSGMGDMHTTIAVEKLAALGVNVDTGVPQIPYRETIRAVSQAQGKHKK QSGGHGQYGDCHLRVEPREGFSFCSEVVGGAIPGKYLPSIEKGVQDAMQKGPLAGYPMQDVHVAVTHGSYHDVDSSDLAF RTAGALAFRNAVEGAKPVLLEPVMLLKVRAPAQFTGDLIGDLQTRRARVQGMDPAGTVITITAVVPQSELQTYSADLRSM TGDRGAFSVKPAGYQDLPEHLAKKVIEARKAASLSS
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=705, Percent_Identity=30.6382978723404, Blast_Score=328, Evalue=1e-89, Organism=Homo sapiens, GI19923640, Length=710, Percent_Identity=25.6338028169014, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI25306287, Length=685, Percent_Identity=25.6934306569343, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI25306283, Length=394, Percent_Identity=28.4263959390863, Blast_Score=143, Evalue=5e-34, Organism=Escherichia coli, GI1789738, Length=698, Percent_Identity=34.6704871060172, Blast_Score=444, Evalue=1e-125, Organism=Escherichia coli, GI1790835, Length=376, Percent_Identity=27.3936170212766, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI48994988, Length=130, Percent_Identity=33.8461538461538, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17533571, Length=692, Percent_Identity=28.757225433526, Blast_Score=296, Evalue=2e-80, Organism=Caenorhabditis elegans, GI17556745, Length=716, Percent_Identity=22.9050279329609, Blast_Score=188, Evalue=7e-48, Organism=Saccharomyces cerevisiae, GI6323098, Length=688, Percent_Identity=30.8139534883721, Blast_Score=323, Evalue=5e-89, Organism=Saccharomyces cerevisiae, GI6322359, Length=772, Percent_Identity=25.259067357513, Blast_Score=214, Evalue=4e-56, Organism=Drosophila melanogaster, GI24582462, Length=714, Percent_Identity=28.8515406162465, Blast_Score=313, Evalue=2e-85, Organism=Drosophila melanogaster, GI221458488, Length=721, Percent_Identity=25.7975034674064, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI78706572, Length=148, Percent_Identity=31.0810810810811, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 72090; Mature: 71959
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSESVVPENTPVRVVSLAGHSGAGKTTLAEALLVASGALLRAGRVTEGTTQSDHTDAEK CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHH QHGFSITTGVLRLSQGGTDITLLDTPGYADFVREIRGGIRAADSVLMVVSAVSGVEVGTE HCCCEEEEHHEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH RVWATADRFEMPRLVVISKMDRERANFHAVLADLRASLRGPVAAAYLPVGEGPAFRGVVD HHEECHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH VLTAAPDELPGELRPALNEAREALVDAIVETDDDLMNRYLEGEAIGTEELRAALLRAVHA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHC GRLYPVVPVSAETGVGVPELLNLMVVGLRSASERGVLTGVDGQTREPTPNAPASARVWRV CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEE SVDPFVGKLAYIRVWSGTIRPGDTLRNTTRGVDVKPAHLYVVSGKDLTEVSELRAGMIGV ECCHHHCCEEEEEEECCCCCCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH LTKIPELHTGDTLADPAHPIEYDPLVLPDPAHTVALFPKTRQDEDRLSSAIGRLLDEDPT HHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCC LRFAREGQTGELLLSGMGDMHTTIAVEKLAALGVNVDTGVPQIPYRETIRAVSQAQGKHK EEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHH KQSGGHGQYGDCHLRVEPREGFSFCSEVVGGAIPGKYLPSIEKGVQDAMQKGPLAGYPMQ HCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC DVHVAVTHGSYHDVDSSDLAFRTAGALAFRNAVEGAKPVLLEPVMLLKVRAPAQFTGDLI CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCHHHHHHH GDLQTRRARVQGMDPAGTVITITAVVPQSELQTYSADLRSMTGDRGAFSVKPAGYQDLPE HHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHH HLAKKVIEARKAASLSS HHHHHHHHHHHHHCCCC >Mature Secondary Structure PSESVVPENTPVRVVSLAGHSGAGKTTLAEALLVASGALLRAGRVTEGTTQSDHTDAEK CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHH QHGFSITTGVLRLSQGGTDITLLDTPGYADFVREIRGGIRAADSVLMVVSAVSGVEVGTE HCCCEEEEHHEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH RVWATADRFEMPRLVVISKMDRERANFHAVLADLRASLRGPVAAAYLPVGEGPAFRGVVD HHEECHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH VLTAAPDELPGELRPALNEAREALVDAIVETDDDLMNRYLEGEAIGTEELRAALLRAVHA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHC GRLYPVVPVSAETGVGVPELLNLMVVGLRSASERGVLTGVDGQTREPTPNAPASARVWRV CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEE SVDPFVGKLAYIRVWSGTIRPGDTLRNTTRGVDVKPAHLYVVSGKDLTEVSELRAGMIGV ECCHHHCCEEEEEEECCCCCCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH LTKIPELHTGDTLADPAHPIEYDPLVLPDPAHTVALFPKTRQDEDRLSSAIGRLLDEDPT HHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCC LRFAREGQTGELLLSGMGDMHTTIAVEKLAALGVNVDTGVPQIPYRETIRAVSQAQGKHK EEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHH KQSGGHGQYGDCHLRVEPREGFSFCSEVVGGAIPGKYLPSIEKGVQDAMQKGPLAGYPMQ HCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC DVHVAVTHGSYHDVDSSDLAFRTAGALAFRNAVEGAKPVLLEPVMLLKVRAPAQFTGDLI CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCHHHHHHH GDLQTRRARVQGMDPAGTVITITAVVPQSELQTYSADLRSMTGDRGAFSVKPAGYQDLPE HHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHH HLAKKVIEARKAASLSS HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA