Definition | Candidatus Koribacter versatilis Ellin345, complete genome. |
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Accession | NC_008009 |
Length | 5,650,368 |
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Identifier: 94967897
GI number:
Start: 1080588
End: 1081643
Strand: Reverse
Name: Not Available
Synonym: Acid345_0866
Alternate gene names: NA
Gene position: NA
Preceding gene: 94967901
Following gene: 94967896
Centisome position: NA
GC content: NA
Gene sequence:
>1056_bases TTGGGAATCAAACTGCCCGAGCCAGAAAAACTGCGCGACATCTTCAGCGCATTGGGATTTGTGACCACTGGTACGTCCAT GTCGGGCGTCCTTCAGTGCGCATACAAGGCGTCCCATGCCAGCGATACCACGGTGCTCTTACAGGGCGAAACGGGCACCG GGAAGCAAGTCCTTGCGCGTGCCATCCATGCCCTCGACGAAAAACGGGGACGCTTCCCGTTCGTCACCGTGCATTGCAGC ACGATCTCCGAAAGCCTCGCCGAAAGCGAACTCTTCGGCCATCGGAAAGGTTCGTTTTCCGGCGCCGTGTCAGCCCGGTC TGGTCTTTTTCAGGCGGCGGAACGTGGCACCGTGTTCCTCGATGACGTCAACGACTTGCCACTGCGCTTGCAGCCGAAGT TGCTGGACGCGCTGCAAAGAGGCAGCATCCGGCCACTCGGTTCCGATCGCGAACAGCATGTAGATGTGCGGATCATCGCG GCAGCAAACCGGCAGCTTGAACCTCTGGTAGCGCAAGGAGAGTTCCGCGCGGACCTTTACCATCGGCTCAACGTCATCAA AGTGAACCTGCCACCGTTACGCGAGCGAGACGGCGATGACTTGGCTGCACTGGTGCTGGAATTTGCCCACCGCTACCCCG CACTCTACCAACGCATCGAGTCGCTGGATCCCGAGCTGTTGCAATACCTAAAAGTCTGTCGTTTCGAGGGAAACGTCCGC GAATTGGAGAATGCCGTTCAGCGGATGTTGTTCCTAAAAAACGAAGGCGATTCCCTCACACGTGCGGATTGGCTCCGCCA AGAAGCGGATTCGGCCACCGAGACCCAAGCTGCAAGCGACATCCCAGCTGCCGCCAACCTCCTGTGGCTCATCATGGTAC GCAACGAGCTCCCTTTCCCTGAATTGATGCGCAAGATCGAAGGCGAACTGCTGCGGCGAGCTCTCCAGGTTAGCGGCAAG ACCCGTCGCGAAATCGCTCAGCTCCTCCAGACCAGTGAACGCACGCTCTACCACAAGATGAGCGCACACGGGATCGGCGG ATCGAAAGAGGCATAG
Upstream 100 bases:
>100_bases CAGTCATTGCCACCGAACGGCTCACTCACAGCTTCAGATCCCCGATGTTCCCGCTTCGACCTACCCTCACCCGGTTTCGG AGCTCCCCCGCGAGGAAGTT
Downstream 100 bases:
>100_bases GGCTGAGCTCCTAGCGCACTGCCACATTCTTCAGTTGCATTGGTACAGGTGGGCGCGCCGATCCTCAAATCGGACGGGAA CCTCTAATTTCCTCGACTTC
Product: sigma-54 dependent trancsriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>351_residues MGIKLPEPEKLRDIFSALGFVTTGTSMSGVLQCAYKASHASDTTVLLQGETGTGKQVLARAIHALDEKRGRFPFVTVHCS TISESLAESELFGHRKGSFSGAVSARSGLFQAAERGTVFLDDVNDLPLRLQPKLLDALQRGSIRPLGSDREQHVDVRIIA AANRQLEPLVAQGEFRADLYHRLNVIKVNLPPLRERDGDDLAALVLEFAHRYPALYQRIESLDPELLQYLKVCRFEGNVR ELENAVQRMLFLKNEGDSLTRADWLRQEADSATETQAASDIPAAANLLWLIMVRNELPFPELMRKIEGELLRRALQVSGK TRREIAQLLQTSERTLYHKMSAHGIGGSKEA
Sequences:
NA
Specific function: NA
COG id: COG3604
COG function: function code KT; Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA