Click here to switch to the map view.

The map label for this gene is bugT

Identifier: 94312727

GI number: 94312727

Start: 336315

End: 337277

Strand: Direct

Name: bugT

Synonym: Rmet_3797

Alternate gene names: NA

Gene position: 336315-337277 (Clockwise)

Preceding gene: 291481494

Following gene: 94312728

Centisome position: 13.04

GC content: 62.51

Gene sequence:

>963_bases
ATGCTACGAATTTTTCTTGCCGCGGTAATGCTTGTGCTTGCGAACGGCTCGGCACTTGCCGATGCCTACCCATCCCGTCC
CGTCAGATTGCTGGTTGGGTATGCGCCGGGTGGGCCGGTCGATACCGCCGCGCGCATCTATGCGGACTACCTCGGGCGTG
TGCTCAAGCAGCCGGTAATCGTCGATAACCGGGCGGGTGCCAGCGGCGCCATCGCGGCCGGCATGACGGTCAGCGCCAAG
CCTGACGGCTACACGCTCTATTTCGTGGCCAGCCCGACGATGACGATGACGCCGCTGATCCAGAGGTCCGTCAGCTTCAA
GCCGGCACAGGATTTCAGCTATGTCGGCCTGATCACCGACTACACCAACGTGCTGCTGATCAACAAGGATTTCCCGGCCA
GGAACGTGGACGAACTGGTCTCGTACGCGCGCAAGCATCCCGGTGAAGTGAGCTTCGGTTCGGCGGGCGTGGGTGCGTCG
AACCATCTGTCGGCGGAACTGCTTGCGCAGATGACAGGAGTGAAGATGCTGCACGTGCCATACAAGGGCAATGCGCCGGC
TATGGCCGACGTCATCAGCGGCAAGGTGACCTTCATGTTCGATATCACCGGAACGGCTATCGGCCATATCCGGGGCGGCA
AGGTACGTGCGCTGGCCGTGACGTCGAAGACGCGCAACCCCGCGCTGCCCAATGTGCCGACACTGGTCGAATCCGGCCTC
AAGCAGTACGACCTGACGGGCTGGTACGCGCTGGTTGGTCCTCCGGGGCTACCTGCCGATGTGACGGATCGACTCGTGAA
GGCGCAGCAGGCCGTGGTGCAGGATGCGGCCTACCGGGAGCGGATGGTCGATGGCGGCTATGACCTGAACGTCTCCGGCC
CGGCCGCGCTGCAAGAGCGTATCAAGAAGGAACTCGCGCTCTGGGGCAACGTGGTCAAGACTGCGAATATCGAGGTCGAG
TAA

Upstream 100 bases:

>100_bases
AGCGGGTCTGCCGCAAAGTCTCCCCCAACTCACCGCACGACAAACTCGCGATAAAGCCGGTGAGCAATGGAAGTCCTGAT
GCAGAAAACAGGTGGAGACA

Downstream 100 bases:

>100_bases
AAGGTATAAGCGAGGTATAAGCGGTCGAAGAATGGAGGTCGGGCAAGCCGGATCACCCGGCGGTTTCGCGCGGGCGAAGT
ACTGCTTTTCGAACGGCGAA

Product: extra-cytoplasmic solute receptor protein

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLRIFLAAVMLVLANGSALADAYPSRPVRLLVGYAPGGPVDTAARIYADYLGRVLKQPVIVDNRAGASGAIAAGMTVSAK
PDGYTLYFVASPTMTMTPLIQRSVSFKPAQDFSYVGLITDYTNVLLINKDFPARNVDELVSYARKHPGEVSFGSAGVGAS
NHLSAELLAQMTGVKMLHVPYKGNAPAMADVISGKVTFMFDITGTAIGHIRGGKVRALAVTSKTRNPALPNVPTLVESGL
KQYDLTGWYALVGPPGLPADVTDRLVKAQQAVVQDAAYRERMVDGGYDLNVSGPAALQERIKKELALWGNVVKTANIEVE

Sequences:

>Translated_320_residues
MLRIFLAAVMLVLANGSALADAYPSRPVRLLVGYAPGGPVDTAARIYADYLGRVLKQPVIVDNRAGASGAIAAGMTVSAK
PDGYTLYFVASPTMTMTPLIQRSVSFKPAQDFSYVGLITDYTNVLLINKDFPARNVDELVSYARKHPGEVSFGSAGVGAS
NHLSAELLAQMTGVKMLHVPYKGNAPAMADVISGKVTFMFDITGTAIGHIRGGKVRALAVTSKTRNPALPNVPTLVESGL
KQYDLTGWYALVGPPGLPADVTDRLVKAQQAVVQDAAYRERMVDGGYDLNVSGPAALQERIKKELALWGNVVKTANIEVE
>Mature_320_residues
MLRIFLAAVMLVLANGSALADAYPSRPVRLLVGYAPGGPVDTAARIYADYLGRVLKQPVIVDNRAGASGAIAAGMTVSAK
PDGYTLYFVASPTMTMTPLIQRSVSFKPAQDFSYVGLITDYTNVLLINKDFPARNVDELVSYARKHPGEVSFGSAGVGAS
NHLSAELLAQMTGVKMLHVPYKGNAPAMADVISGKVTFMFDITGTAIGHIRGGKVRALAVTSKTRNPALPNVPTLVESGL
KQYDLTGWYALVGPPGLPADVTDRLVKAQQAVVQDAAYRERMVDGGYDLNVSGPAALQERIKKELALWGNVVKTANIEVE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34036; Mature: 34036

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIFLAAVMLVLANGSALADAYPSRPVRLLVGYAPGGPVDTAARIYADYLGRVLKQPVI
CHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEE
VDNRAGASGAIAAGMTVSAKPDGYTLYFVASPTMTMTPLIQRSVSFKPAQDFSYVGLITD
EECCCCCCCCEEECEEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEEC
YTNVLLINKDFPARNVDELVSYARKHPGEVSFGSAGVGASNHLSAELLAQMTGVKMLHVP
CCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEC
YKGNAPAMADVISGKVTFMFDITGTAIGHIRGGKVRALAVTSKTRNPALPNVPTLVESGL
CCCCCCHHHHHHCCCEEEEEEECCCEEEEECCCEEEEEEEECCCCCCCCCCCHHHHHHCH
KQYDLTGWYALVGPPGLPADVTDRLVKAQQAVVQDAAYRERMVDGGYDLNVSGPAALQER
HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHH
IKKELALWGNVVKTANIEVE
HHHHHHHHCCEEEEEEEEEC
>Mature Secondary Structure
MLRIFLAAVMLVLANGSALADAYPSRPVRLLVGYAPGGPVDTAARIYADYLGRVLKQPVI
CHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEE
VDNRAGASGAIAAGMTVSAKPDGYTLYFVASPTMTMTPLIQRSVSFKPAQDFSYVGLITD
EECCCCCCCCEEECEEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEEC
YTNVLLINKDFPARNVDELVSYARKHPGEVSFGSAGVGASNHLSAELLAQMTGVKMLHVP
CCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEC
YKGNAPAMADVISGKVTFMFDITGTAIGHIRGGKVRALAVTSKTRNPALPNVPTLVESGL
CCCCCCHHHHHHCCCEEEEEEECCCEEEEECCCEEEEEEEECCCCCCCCCCCHHHHHHCH
KQYDLTGWYALVGPPGLPADVTDRLVKAQQAVVQDAAYRERMVDGGYDLNVSGPAALQER
HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHH
IKKELALWGNVVKTANIEVE
HHHHHHHHCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]