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The map label for this gene is 94312716

Identifier: 94312716

GI number: 94312716

Start: 322787

End: 323962

Strand: Direct

Name: 94312716

Synonym: Rmet_3786

Alternate gene names: NA

Gene position: 322787-323962 (Clockwise)

Preceding gene: 94312715

Following gene: 291481492

Centisome position: 12.51

GC content: 58.59

Gene sequence:

>1176_bases
GTGAAATTGAATCGTTTTGCAGCAGTTGCCCTGGCCGCGTGCTCGGGTTCCGCATTGGCCCAGTCGAGCGTTACGCTCTA
CGGGGTGGTCGATGCAAACATCGAGTATGTGAACCACGTGGGCGCGGTGCCTACAGCGGCGAATGGCTTTAATCCAGGGC
CGGGGCATGACGTCGTTCGCATGAATTCGGGCGGCTTGTCCGGTTCCCGTTGGGGTATCCGCGGCGTTGAGGACCTCGGC
GCAGGGACGCAAGCTGTCTTCGTGCTCGAAAATGGATTCAGCGGCGACACCGGCACGATGCAACAGTCGAGCCGACTGTT
CGGTCGGCAGGCGTTTGTGGGGATAAAGAACGCGACCTATGGCCAGATCAGTCTGGGGCGCCAATACACCTCGTTGTTCG
ACAGCATCGTCAACTTTGTACCGGCATACTTTGCTACGCAGTACGAGCCGATCACGCTCTTTGCCGGTGCGAACTTCCGT
GAAGACAACACGATCAAGTACACCTTGAATGCGGGCCAGTTCACCGGCGTTGCGCATTATTCATTTGGCACTGGTCTGGC
TTTGCCGCAGACCGTGCAGTCAGGCCTGGCGATCGGTGGCAATGGCGAAGTGCCGGGTCAGGCGCGAAGGGACAGTGCTT
ATGGCGCGTCTCTGTCCTACGCCGGCGGTTCGCTGTGGGCAGCCATCGCGTACGACCAGTTCAATCCCACCATTGGCACG
ACAACCAGCGCGAGCAGCGGCAGTTTCAAGAAGGCAACGGCGGCGCTGAGCTACAGCCTGCCTTGGGGGCGCATCATGGG
TGGCTATCGTTGGGGGCAAAACAAGACACCGGCGGGCGCGACAATCGGGCGAGATGACTTCTTCTGGGTTGGTGGCATAT
ATCAGGTAGGGCCGGCGCTCAGTCTCACGCTCGAGTACGACTATGACAAGGTCCGGAATGTATTCGGTAACACGAGCGTC
GCCAATCCTTGGCAGGTGAACCTGATTGCCGATTACAGCCTCTCGAAGCGCACGGATGTGTACCTGTCGGCAGCCTACGC
AAAAAATGCAGGGTTGATGCTTGACTCTGCGCTGATTGCCTATGCGAATAGCCTCTCGCTCGGTAACAGCTATGTGCTTG
GCAACGGCAACTCGTCGATGCTGGGTGTGTCGGTTGGCGTTCGTCACAAATTCTGA

Upstream 100 bases:

>100_bases
TGGCATATGCGCGCCCTCGGCGTGCGGCCTGCGCTCGTCCCGACGACGAGGCTGAAGATGCCTGCAAGCCAGATGTATCA
CGACAACAAAGGAGATAGTG

Downstream 100 bases:

>100_bases
CGCACTGGAACACATACCGTCCGGTCCCGTGCTGCCGATTGTTGGCAGGCGCAATCGGACGGAATTGCAGCGGCATCCCA
GCGTCGTCAGTCGGCCAGAG

Product: putative outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MKLNRFAAVALAACSGSALAQSSVTLYGVVDANIEYVNHVGAVPTAANGFNPGPGHDVVRMNSGGLSGSRWGIRGVEDLG
AGTQAVFVLENGFSGDTGTMQQSSRLFGRQAFVGIKNATYGQISLGRQYTSLFDSIVNFVPAYFATQYEPITLFAGANFR
EDNTIKYTLNAGQFTGVAHYSFGTGLALPQTVQSGLAIGGNGEVPGQARRDSAYGASLSYAGGSLWAAIAYDQFNPTIGT
TTSASSGSFKKATAALSYSLPWGRIMGGYRWGQNKTPAGATIGRDDFFWVGGIYQVGPALSLTLEYDYDKVRNVFGNTSV
ANPWQVNLIADYSLSKRTDVYLSAAYAKNAGLMLDSALIAYANSLSLGNSYVLGNGNSSMLGVSVGVRHKF

Sequences:

>Translated_391_residues
MKLNRFAAVALAACSGSALAQSSVTLYGVVDANIEYVNHVGAVPTAANGFNPGPGHDVVRMNSGGLSGSRWGIRGVEDLG
AGTQAVFVLENGFSGDTGTMQQSSRLFGRQAFVGIKNATYGQISLGRQYTSLFDSIVNFVPAYFATQYEPITLFAGANFR
EDNTIKYTLNAGQFTGVAHYSFGTGLALPQTVQSGLAIGGNGEVPGQARRDSAYGASLSYAGGSLWAAIAYDQFNPTIGT
TTSASSGSFKKATAALSYSLPWGRIMGGYRWGQNKTPAGATIGRDDFFWVGGIYQVGPALSLTLEYDYDKVRNVFGNTSV
ANPWQVNLIADYSLSKRTDVYLSAAYAKNAGLMLDSALIAYANSLSLGNSYVLGNGNSSMLGVSVGVRHKF
>Mature_391_residues
MKLNRFAAVALAACSGSALAQSSVTLYGVVDANIEYVNHVGAVPTAANGFNPGPGHDVVRMNSGGLSGSRWGIRGVEDLG
AGTQAVFVLENGFSGDTGTMQQSSRLFGRQAFVGIKNATYGQISLGRQYTSLFDSIVNFVPAYFATQYEPITLFAGANFR
EDNTIKYTLNAGQFTGVAHYSFGTGLALPQTVQSGLAIGGNGEVPGQARRDSAYGASLSYAGGSLWAAIAYDQFNPTIGT
TTSASSGSFKKATAALSYSLPWGRIMGGYRWGQNKTPAGATIGRDDFFWVGGIYQVGPALSLTLEYDYDKVRNVFGNTSV
ANPWQVNLIADYSLSKRTDVYLSAAYAKNAGLMLDSALIAYANSLSLGNSYVLGNGNSSMLGVSVGVRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41183; Mature: 41183

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNRFAAVALAACSGSALAQSSVTLYGVVDANIEYVNHVGAVPTAANGFNPGPGHDVVR
CCCHHHEEEEEEECCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCEEE
MNSGGLSGSRWGIRGVEDLGAGTQAVFVLENGFSGDTGTMQQSSRLFGRQAFVGIKNATY
ECCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCC
GQISLGRQYTSLFDSIVNFVPAYFATQYEPITLFAGANFREDNTIKYTLNAGQFTGVAHY
CEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEEE
SFGTGLALPQTVQSGLAIGGNGEVPGQARRDSAYGASLSYAGGSLWAAIAYDQFNPTIGT
CCCCCCCCHHHHHCCEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCC
TTSASSGSFKKATAALSYSLPWGRIMGGYRWGQNKTPAGATIGRDDFFWVGGIYQVGPAL
CCCCCCCCCCCEEEEEEECCCHHHHCCCEECCCCCCCCCCCCCCCCEEEECCCEECCCEE
SLTLEYDYDKVRNVFGNTSVANPWQVNLIADYSLSKRTDVYLSAAYAKNAGLMLDSALIA
EEEEEECHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEHHHHHH
YANSLSLGNSYVLGNGNSSMLGVSVGVRHKF
HHHCCCCCCEEEEECCCCCEEEEEEECEECC
>Mature Secondary Structure
MKLNRFAAVALAACSGSALAQSSVTLYGVVDANIEYVNHVGAVPTAANGFNPGPGHDVVR
CCCHHHEEEEEEECCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCEEE
MNSGGLSGSRWGIRGVEDLGAGTQAVFVLENGFSGDTGTMQQSSRLFGRQAFVGIKNATY
ECCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCC
GQISLGRQYTSLFDSIVNFVPAYFATQYEPITLFAGANFREDNTIKYTLNAGQFTGVAHY
CEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEEE
SFGTGLALPQTVQSGLAIGGNGEVPGQARRDSAYGASLSYAGGSLWAAIAYDQFNPTIGT
CCCCCCCCHHHHHCCEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCC
TTSASSGSFKKATAALSYSLPWGRIMGGYRWGQNKTPAGATIGRDDFFWVGGIYQVGPAL
CCCCCCCCCCCEEEEEEECCCHHHHCCCEECCCCCCCCCCCCCCCCEEEECCCEECCCEE
SLTLEYDYDKVRNVFGNTSVANPWQVNLIADYSLSKRTDVYLSAAYAKNAGLMLDSALIA
EEEEEECHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEHHHHHH
YANSLSLGNSYVLGNGNSSMLGVSVGVRHKF
HHHCCCCCCEEEEECCCCCEEEEEEECEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]