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The map label for this gene is tnsD

Identifier: 94312703

GI number: 94312703

Start: 308210

End: 309517

Strand: Direct

Name: tnsD

Synonym: Rmet_3773

Alternate gene names: NA

Gene position: 308210-309517 (Clockwise)

Preceding gene: 94312702

Following gene: 94312704

Centisome position: 11.95

GC content: 56.12

Gene sequence:

>1308_bases
ATGAACGTCTTCATGTCTCCTGCGTATGACGATGAGCTCGTCTACAACGTGTGTACGAGATACCTGGCGGAGTTTCCGAC
GGTATCCCGCGAGCGAATCATCACGGACGTCTTCGGTGTGAATATCGTATTGTCGCCCCACCTTCCAAGAAATCTGCACC
AGTTCTGTGAGCGGACGGGTCAGGTAATCGCCAAAACGAAGGAGGAGATGTTTTGGTGGCACTCGATGTATCCGTTCATC
TGTGCATACCAGACCAGCGAGAGGCGCGCCCAGGCCAGGGATTACGCCTTCTATGGGCGCGCGGTTAGGAGGATGCCAGG
GATCCTGGCTGCCATTGAACCGCCGAAATTCCTACGCTGGTGTCCGGATTGCGTGGTTGAGGACCGAGCGCGGCCGGACT
GTGGTGAAGCGTACTGGCGACGGACGCATCAGATTCCGGGGGTCTGGCAATGCGATAAGCATGGTACGGACCTGGTCGAC
TCTCAGGTACCTCGATTCGCGTCCGTGACCTCGGACCACCCTGCAGAGATGATGATACCTCGGAACGTACGTCCCTTCCG
CAAGAAGCGTCCATGTTCACCAATGGAAGCCTTGCTGAGGAAGCATCTTGTAGCACTGCTGAAGGCTGGACATTTCGAGG
ATCGGCCGGAGCATCCGAACTTCAGGGAAGCGGCAGCGCGTGCGGGGTTCGGGCCCACAGTCAAGATTGACTATACCGAG
CTGTATGAGGCGTTCTCCGAATACTGGGGTGATGTACTGGAGCGGCTTGATGAACGGTATCGCACAAGACCGGCGGGAGT
GAGTTGGTTACACGCCCAGTTCAACGCGAGAGGTCTCATGGGCCAACCGGTTGTTCGGGAGTTGTTTGACATCTTCTTCC
GTGATCGGTGCGGTCTCGACGTCTATCAGATGCCTCCCTTGGAATCCTCTTATAAGCGATTTATGCCTGTTTTCTATTGT
CCAAATCCGTATGCCGCCCATGGGCGGGGCGAACAAGTCAAACGAGTGACCCGTTGCAAGGACAATCCTGACATCCTGGA
TATCTCATGCAAGTGCGGCTTCACCGCGATGGTGTCTGCGGCTAGTGCTGGAAAGACGATGACGATGGCCGACGTGATCA
AGGTCGGGAAATTTGGACCAACCTGGCCAGAGCAATGTGCGAAGCTGCGGGCCGAGGGCAAGGGCTTGAGTCAGGTAGCA
AAGGAGCTCAATCTACCAGAGAACACAGCGCGCTACTTGTGGCGCCAGAGTAAGCCTTTGCTTGCGGCGGATGAGAAGAC
GCTCAAGAAACAGGAGTCTGCGAAATGA

Upstream 100 bases:

>100_bases
AGAGCGAGGCTCCTGCTGCGTCGGATGCGCAATCGCTCGAAATGCGTGCTGCGCAGGAGATGGAGCAAGACCAGAGGACG
CTTATGGGAAGCACTGCCGT

Downstream 100 bases:

>100_bases
ACGTATTCGTATCTCCTCTGTATGAAGATGAGCTGCTGTACAGCCATTGCGTACGGTATCTGTCGGAATTTCCCATGGTT
TGGCGCAACAAGCTCATGCT

Product: Tn7-like transposition protein

Products: NA

Alternate protein names: Tn7-Cj Transposition Protein TnsD; Tn7-Like Transposition Protein; Tn7-Like Protein Transposition Protein D; Transposon Tn7 Transposition Protein TnsD; Transposon Transposition Protein

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MNVFMSPAYDDELVYNVCTRYLAEFPTVSRERIITDVFGVNIVLSPHLPRNLHQFCERTGQVIAKTKEEMFWWHSMYPFI
CAYQTSERRAQARDYAFYGRAVRRMPGILAAIEPPKFLRWCPDCVVEDRARPDCGEAYWRRTHQIPGVWQCDKHGTDLVD
SQVPRFASVTSDHPAEMMIPRNVRPFRKKRPCSPMEALLRKHLVALLKAGHFEDRPEHPNFREAAARAGFGPTVKIDYTE
LYEAFSEYWGDVLERLDERYRTRPAGVSWLHAQFNARGLMGQPVVRELFDIFFRDRCGLDVYQMPPLESSYKRFMPVFYC
PNPYAAHGRGEQVKRVTRCKDNPDILDISCKCGFTAMVSAASAGKTMTMADVIKVGKFGPTWPEQCAKLRAEGKGLSQVA
KELNLPENTARYLWRQSKPLLAADEKTLKKQESAK

Sequences:

>Translated_435_residues
MNVFMSPAYDDELVYNVCTRYLAEFPTVSRERIITDVFGVNIVLSPHLPRNLHQFCERTGQVIAKTKEEMFWWHSMYPFI
CAYQTSERRAQARDYAFYGRAVRRMPGILAAIEPPKFLRWCPDCVVEDRARPDCGEAYWRRTHQIPGVWQCDKHGTDLVD
SQVPRFASVTSDHPAEMMIPRNVRPFRKKRPCSPMEALLRKHLVALLKAGHFEDRPEHPNFREAAARAGFGPTVKIDYTE
LYEAFSEYWGDVLERLDERYRTRPAGVSWLHAQFNARGLMGQPVVRELFDIFFRDRCGLDVYQMPPLESSYKRFMPVFYC
PNPYAAHGRGEQVKRVTRCKDNPDILDISCKCGFTAMVSAASAGKTMTMADVIKVGKFGPTWPEQCAKLRAEGKGLSQVA
KELNLPENTARYLWRQSKPLLAADEKTLKKQESAK
>Mature_435_residues
MNVFMSPAYDDELVYNVCTRYLAEFPTVSRERIITDVFGVNIVLSPHLPRNLHQFCERTGQVIAKTKEEMFWWHSMYPFI
CAYQTSERRAQARDYAFYGRAVRRMPGILAAIEPPKFLRWCPDCVVEDRARPDCGEAYWRRTHQIPGVWQCDKHGTDLVD
SQVPRFASVTSDHPAEMMIPRNVRPFRKKRPCSPMEALLRKHLVALLKAGHFEDRPEHPNFREAAARAGFGPTVKIDYTE
LYEAFSEYWGDVLERLDERYRTRPAGVSWLHAQFNARGLMGQPVVRELFDIFFRDRCGLDVYQMPPLESSYKRFMPVFYC
PNPYAAHGRGEQVKRVTRCKDNPDILDISCKCGFTAMVSAASAGKTMTMADVIKVGKFGPTWPEQCAKLRAEGKGLSQVA
KELNLPENTARYLWRQSKPLLAADEKTLKKQESAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50108; Mature: 50108

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVFMSPAYDDELVYNVCTRYLAEFPTVSRERIITDVFGVNIVLSPHLPRNLHQFCERTG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHH
QVIAKTKEEMFWWHSMYPFICAYQTSERRAQARDYAFYGRAVRRMPGILAAIEPPKFLRW
HHHHHHHHHHHHHHHHCHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHH
CPDCVVEDRARPDCGEAYWRRTHQIPGVWQCDKHGTDLVDSQVPRFASVTSDHPAEMMIP
CHHHHHCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHCCCHHHCCCCCCCCEECC
RNVRPFRKKRPCSPMEALLRKHLVALLKAGHFEDRPEHPNFREAAARAGFGPTVKIDYTE
CCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEEHHH
LYEAFSEYWGDVLERLDERYRTRPAGVSWLHAQFNARGLMGQPVVRELFDIFFRDRCGLD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
VYQMPPLESSYKRFMPVFYCPNPYAAHGRGEQVKRVTRCKDNPDILDISCKCGFTAMVSA
CEECCCCHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
ASAGKTMTMADVIKVGKFGPTWPEQCAKLRAEGKGLSQVAKELNLPENTARYLWRQSKPL
HHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCC
LAADEKTLKKQESAK
EECCHHHHHHHHCCC
>Mature Secondary Structure
MNVFMSPAYDDELVYNVCTRYLAEFPTVSRERIITDVFGVNIVLSPHLPRNLHQFCERTG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHHH
QVIAKTKEEMFWWHSMYPFICAYQTSERRAQARDYAFYGRAVRRMPGILAAIEPPKFLRW
HHHHHHHHHHHHHHHHCHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHH
CPDCVVEDRARPDCGEAYWRRTHQIPGVWQCDKHGTDLVDSQVPRFASVTSDHPAEMMIP
CHHHHHCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHCCCHHHCCCCCCCCEECC
RNVRPFRKKRPCSPMEALLRKHLVALLKAGHFEDRPEHPNFREAAARAGFGPTVKIDYTE
CCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEEHHH
LYEAFSEYWGDVLERLDERYRTRPAGVSWLHAQFNARGLMGQPVVRELFDIFFRDRCGLD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
VYQMPPLESSYKRFMPVFYCPNPYAAHGRGEQVKRVTRCKDNPDILDISCKCGFTAMVSA
CEECCCCHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
ASAGKTMTMADVIKVGKFGPTWPEQCAKLRAEGKGLSQVAKELNLPENTARYLWRQSKPL
HHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCC
LAADEKTLKKQESAK
EECCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA