Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
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Accession | NC_007974 |
Length | 2,580,084 |
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The map label for this gene is 94312682
Identifier: 94312682
GI number: 94312682
Start: 293835
End: 295460
Strand: Direct
Name: 94312682
Synonym: Rmet_3750
Alternate gene names: NA
Gene position: 293835-295460 (Clockwise)
Preceding gene: 94312681
Following gene: 94312684
Centisome position: 11.39
GC content: 54.61
Gene sequence:
>1626_bases ATGTCCACCGCAGTCGCCAACTACCCTTGGGCCGAAGAGCTCGAGAAAACCGTGGTCAACAGTCTGGTCACCACGTTTGG TTTGGATTTCCTTCTGTTCAAGGACAAGGTTGGCGGCGACGTGGACACAGTCCATAACGTGCGTCAGGGCATCTGGGGCA CGGAAAAGGAACAGCAAGCCTACGAGCAGCGCGGGGCTTACGATGGCACGGCGTATCACACGCATCCGAATTACATATCG ACCGGCAAAAAAGACAAGGCCCTGCATCAAACTGGGCAACTGAACGATGCCTATCGCGGTCAGGTCATGGCAATGGACGA GCAACGCAATCTCGACCATATTATTTCTGCCAAGGAAATCCACGACGACGCTGGCCGGGTGTTGGCAGAACTCGACGGCG TGGAGTTGGCCAACCAGGGCAGTAACCTGCAAACGACGCTGGAAACGATTAACAAGTCCAAGAAACAATCCCCCATCGAT GACTATCTGAAGAATCTTCCCAGGCTCGTCGAAGGTCATGAAAAGGACTTGGCCAGAAAGCAGGAGAAACTACGCAACCT GCCGCGCGAAACCCCCGAGCAGCGGCACAAGGCGGAAGCTCTCGAAGAAAAAGTCAGAAAGGCACAGAAGAAGATAGAGG GACTCAAGTCTATCGATGCCGAGGCAATGCGGAAGAAAGATCAACAGGCTCGAAAGAAGTACGATGGAGCAATCGATCGT GCCTATTACGGTGGCAGCAAGTTCATGCAGCAAACCGGCTTTGCTGCGGGTCTTTCTGGCTTCAAGATGGGCACTCGCCA AATGCTTGGGTTGGTCATGGCGGAGGTCTGGTTCGAGCTACGCGCGCAAGTTCCGATTATTCTGGACACCCTTAAAAGAC AGTTCAGCTTCGAGAAGTTCGTCGAAGACATCCAGAGCACCTTTCGGGGTATCTGGCGTCGTATTCGGTTGCGCTTCAAG GACTTCCTGACCAGCTTCAAGGACGGCATTTTTGGTGGCATCGTATCGAGCCTGACGACCACGGTTTTCAACATCTTTGC CACCACACAGAAGGCAACGATCAAAATCATTCGGGAGATCTGGGGACAGTTGTGCAAGGCGTTCAAGCTGGTCTTCTTCA ACCCTGAGAAGCTGGGTTTTGCTGATCTGTGCAAAGCCGTCATGGGCGTCCTGTCGGCGGCCGCAGGCGTGACGGTGGGC TCGATCGCCCATGCGCAATTACTGCCGTTGTGCAGTTTTCCATTTGGCGCTGAACTGGCGTCGTTTGTGGGCGCTTTGGT AACCGGCTTGGCAACGCTTGGGTTCACGTACGTCTTGTTGCATGGCAGCGTGGCGCAACGGGCTTGGGCCTATCTCGAAT CCATGATGCCGCATGCGGATACGGTGAAGAAGTACCAAGCCATCAATGCCGAGCTGGATGGCTACCTGACCGAGTTGGCG CGTCAGGAATTCAACATGGACACCGACGAGTTGGCAGCGTTTTCGCGCGACTTGTCCGCTTGTAACGATGAAATGCAGCG CGGTCTCGTTCTGAAAGATGAAATCGCCAGGCAGGGCATTGAGTTGCCCTATGAAATGGGCAGCGCGACGAGCACACGTA AATGGCTAGCGTCCCTGGCGAAGTGA
Upstream 100 bases:
>100_bases GCCGAGTCTCAGGCAGGAAACATCGAGGCGGTTCGTTCCTGAATTGCGTGCGCCGCGATTGGCGCGGCACACGATTCGTT CATCTCAATCACAAGAAAAC
Downstream 100 bases:
>100_bases ACGCACCGATTTCGCGCGCATTTCCCTGTACGCAGTGCGGGCGTTGCTGTGAGAACGTTCATCTATCCGACGAAACACTC TTCCTGGATCGTGGTGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MSTAVANYPWAEELEKTVVNSLVTTFGLDFLLFKDKVGGDVDTVHNVRQGIWGTEKEQQAYEQRGAYDGTAYHTHPNYIS TGKKDKALHQTGQLNDAYRGQVMAMDEQRNLDHIISAKEIHDDAGRVLAELDGVELANQGSNLQTTLETINKSKKQSPID DYLKNLPRLVEGHEKDLARKQEKLRNLPRETPEQRHKAEALEEKVRKAQKKIEGLKSIDAEAMRKKDQQARKKYDGAIDR AYYGGSKFMQQTGFAAGLSGFKMGTRQMLGLVMAEVWFELRAQVPIILDTLKRQFSFEKFVEDIQSTFRGIWRRIRLRFK DFLTSFKDGIFGGIVSSLTTTVFNIFATTQKATIKIIREIWGQLCKAFKLVFFNPEKLGFADLCKAVMGVLSAAAGVTVG SIAHAQLLPLCSFPFGAELASFVGALVTGLATLGFTYVLLHGSVAQRAWAYLESMMPHADTVKKYQAINAELDGYLTELA RQEFNMDTDELAAFSRDLSACNDEMQRGLVLKDEIARQGIELPYEMGSATSTRKWLASLAK
Sequences:
>Translated_541_residues MSTAVANYPWAEELEKTVVNSLVTTFGLDFLLFKDKVGGDVDTVHNVRQGIWGTEKEQQAYEQRGAYDGTAYHTHPNYIS TGKKDKALHQTGQLNDAYRGQVMAMDEQRNLDHIISAKEIHDDAGRVLAELDGVELANQGSNLQTTLETINKSKKQSPID DYLKNLPRLVEGHEKDLARKQEKLRNLPRETPEQRHKAEALEEKVRKAQKKIEGLKSIDAEAMRKKDQQARKKYDGAIDR AYYGGSKFMQQTGFAAGLSGFKMGTRQMLGLVMAEVWFELRAQVPIILDTLKRQFSFEKFVEDIQSTFRGIWRRIRLRFK DFLTSFKDGIFGGIVSSLTTTVFNIFATTQKATIKIIREIWGQLCKAFKLVFFNPEKLGFADLCKAVMGVLSAAAGVTVG SIAHAQLLPLCSFPFGAELASFVGALVTGLATLGFTYVLLHGSVAQRAWAYLESMMPHADTVKKYQAINAELDGYLTELA RQEFNMDTDELAAFSRDLSACNDEMQRGLVLKDEIARQGIELPYEMGSATSTRKWLASLAK >Mature_540_residues STAVANYPWAEELEKTVVNSLVTTFGLDFLLFKDKVGGDVDTVHNVRQGIWGTEKEQQAYEQRGAYDGTAYHTHPNYIST GKKDKALHQTGQLNDAYRGQVMAMDEQRNLDHIISAKEIHDDAGRVLAELDGVELANQGSNLQTTLETINKSKKQSPIDD YLKNLPRLVEGHEKDLARKQEKLRNLPRETPEQRHKAEALEEKVRKAQKKIEGLKSIDAEAMRKKDQQARKKYDGAIDRA YYGGSKFMQQTGFAAGLSGFKMGTRQMLGLVMAEVWFELRAQVPIILDTLKRQFSFEKFVEDIQSTFRGIWRRIRLRFKD FLTSFKDGIFGGIVSSLTTTVFNIFATTQKATIKIIREIWGQLCKAFKLVFFNPEKLGFADLCKAVMGVLSAAAGVTVGS IAHAQLLPLCSFPFGAELASFVGALVTGLATLGFTYVLLHGSVAQRAWAYLESMMPHADTVKKYQAINAELDGYLTELAR QEFNMDTDELAAFSRDLSACNDEMQRGLVLKDEIARQGIELPYEMGSATSTRKWLASLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60613; Mature: 60482
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAVANYPWAEELEKTVVNSLVTTFGLDFLLFKDKVGGDVDTVHNVRQGIWGTEKEQQA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHH YEQRGAYDGTAYHTHPNYISTGKKDKALHQTGQLNDAYRGQVMAMDEQRNLDHIISAKEI HHHCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCHHHCCCEEEECCCCCHHHHHHHHHH HDDAGRVLAELDGVELANQGSNLQTTLETINKSKKQSPIDDYLKNLPRLVEGHEKDLARK HHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH QEKLRNLPRETPEQRHKAEALEEKVRKAQKKIEGLKSIDAEAMRKKDQQARKKYDGAIDR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH AYYGGSKFMQQTGFAAGLSGFKMGTRQMLGLVMAEVWFELRAQVPIILDTLKRQFSFEKF HHHCHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VEDIQSTFRGIWRRIRLRFKDFLTSFKDGIFGGIVSSLTTTVFNIFATTQKATIKIIREI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGQLCKAFKLVFFNPEKLGFADLCKAVMGVLSAAAGVTVGSIAHAQLLPLCSFPFGAELA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH SFVGALVTGLATLGFTYVLLHGSVAQRAWAYLESMMPHADTVKKYQAINAELDGYLTELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RQEFNMDTDELAAFSRDLSACNDEMQRGLVLKDEIARQGIELPYEMGSATSTRKWLASLA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHCCCCCHHHHHHHHHC K C >Mature Secondary Structure STAVANYPWAEELEKTVVNSLVTTFGLDFLLFKDKVGGDVDTVHNVRQGIWGTEKEQQA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHH YEQRGAYDGTAYHTHPNYISTGKKDKALHQTGQLNDAYRGQVMAMDEQRNLDHIISAKEI HHHCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCHHHCCCEEEECCCCCHHHHHHHHHH HDDAGRVLAELDGVELANQGSNLQTTLETINKSKKQSPIDDYLKNLPRLVEGHEKDLARK HHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHH QEKLRNLPRETPEQRHKAEALEEKVRKAQKKIEGLKSIDAEAMRKKDQQARKKYDGAIDR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH AYYGGSKFMQQTGFAAGLSGFKMGTRQMLGLVMAEVWFELRAQVPIILDTLKRQFSFEKF HHHCHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VEDIQSTFRGIWRRIRLRFKDFLTSFKDGIFGGIVSSLTTTVFNIFATTQKATIKIIREI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGQLCKAFKLVFFNPEKLGFADLCKAVMGVLSAAAGVTVGSIAHAQLLPLCSFPFGAELA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH SFVGALVTGLATLGFTYVLLHGSVAQRAWAYLESMMPHADTVKKYQAINAELDGYLTELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RQEFNMDTDELAAFSRDLSACNDEMQRGLVLKDEIARQGIELPYEMGSATSTRKWLASLA HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHCCCCCHHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA