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The map label for this gene is motB [H]

Identifier: 94312620

GI number: 94312620

Start: 227346

End: 228323

Strand: Direct

Name: motB [H]

Synonym: Rmet_3688

Alternate gene names: 94312620

Gene position: 227346-228323 (Clockwise)

Preceding gene: 94312619

Following gene: 94312621

Centisome position: 8.81

GC content: 63.5

Gene sequence:

>978_bases
ATGAGCAGCGCCCAGGACCTGCGTCCGATCGTCATCAAGAAGGCGAAATCACATGCCAAGCCGCATGGCAACCATAGCTG
GAAGATCGCCTACGCCGACTTCATGACGGCCATGATGGCGCTCTTCCTGGTGCTGTGGCTGCTGAGTTCCTCATCGCCAA
AGGTCCTCGTCGGCGTGGCCGAGTATTTCCGCACGCCGCTCAAGGTGGCGATTGCCGGCGGCGACAAGAGCAGCCTTTCG
ACGAGCGTGATTCCTGGCGGCGGCAAGGACGTGACGGCCAAGGATGGCGAGATCATGAAGGCGCAGACCAACGATCCGGC
AGCGGATGCCCAGCGCCGCCGCGACCAGATCGAGAGCGAACGGCTGCGCGGCCTGAAGAAGCGTCTGGAACAGATCATCG
AAAACAACCCGGTACTGCGCCAGTTCCGCCCGCAGTTGCTGCTCGACATCACCAGCGAAGGTCTGCGCATCCAGATTCTC
GATACGCAGAACCGTCCGATGTTCCGCACCGGCAGCGCGGCGGTCGAGCCGTACATGCGCACGATCCTGCGTGAGATCGG
CCCGGTGCTCAACGAGCTGCCGAACAAGGTCAGTCTTTCCGGACATACCGACTCGGCCAAATACATGATGGGCCAGCGTG
CCTACAGCAACTGGGAACTGTCTGCTGACCGCGCCAATGCGTCACGGCAGGAACTGGTTGCAGGCGGCATGGAGGAAGGC
AAGCTGCTACGCGTGCTGGGTCTGGCGGATACGATGCCGCTGGAGAAGAACGATCCGCTGGCACCGGTGAATCGCCGTAT
CAGCATCGTCGTGCTCAACCAGCGCGCCCAGGCCCAGTTCGAGGCCGAGAACGCCAGCGCCGCCGATGTCACCGTGCAGG
CTCAGAAGGGCCAGGCGGCACAGGACGTGCAGGCGCAGCTGGGGAGCGCCTCGGCTGCCGGCGCGGGCGAAAGCAAAGGC
AAGGGCAAGGGGGAATGA

Upstream 100 bases:

>100_bases
TTCGGCCGCAAGGTGCTGTACTCCACGGTACGTCCGTCGTTCCTCGAGCTCGACGACCACGTCCGCGAAGTCAAGAGCCT
GACCTGACGGGAGAGCAGTC

Downstream 100 bases:

>100_bases
CGCGTGTCGCCTGAACAGGGCGGCGCATCTTCCAGGGCAATCTAGCGAGTCAGGACGACCATGTCTGTCGATATCGATAT
CACGCAGTTCTACCAGACCT

Product: flagellar motor protein MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSSAQDLRPIVIKKAKSHAKPHGNHSWKIAYADFMTAMMALFLVLWLLSSSSPKVLVGVAEYFRTPLKVAIAGGDKSSLS
TSVIPGGGKDVTAKDGEIMKAQTNDPAADAQRRRDQIESERLRGLKKRLEQIIENNPVLRQFRPQLLLDITSEGLRIQIL
DTQNRPMFRTGSAAVEPYMRTILREIGPVLNELPNKVSLSGHTDSAKYMMGQRAYSNWELSADRANASRQELVAGGMEEG
KLLRVLGLADTMPLEKNDPLAPVNRRISIVVLNQRAQAQFEAENASAADVTVQAQKGQAAQDVQAQLGSASAAGAGESKG
KGKGE

Sequences:

>Translated_325_residues
MSSAQDLRPIVIKKAKSHAKPHGNHSWKIAYADFMTAMMALFLVLWLLSSSSPKVLVGVAEYFRTPLKVAIAGGDKSSLS
TSVIPGGGKDVTAKDGEIMKAQTNDPAADAQRRRDQIESERLRGLKKRLEQIIENNPVLRQFRPQLLLDITSEGLRIQIL
DTQNRPMFRTGSAAVEPYMRTILREIGPVLNELPNKVSLSGHTDSAKYMMGQRAYSNWELSADRANASRQELVAGGMEEG
KLLRVLGLADTMPLEKNDPLAPVNRRISIVVLNQRAQAQFEAENASAADVTVQAQKGQAAQDVQAQLGSASAAGAGESKG
KGKGE
>Mature_324_residues
SSAQDLRPIVIKKAKSHAKPHGNHSWKIAYADFMTAMMALFLVLWLLSSSSPKVLVGVAEYFRTPLKVAIAGGDKSSLST
SVIPGGGKDVTAKDGEIMKAQTNDPAADAQRRRDQIESERLRGLKKRLEQIIENNPVLRQFRPQLLLDITSEGLRIQILD
TQNRPMFRTGSAAVEPYMRTILREIGPVLNELPNKVSLSGHTDSAKYMMGQRAYSNWELSADRANASRQELVAGGMEEGK
LLRVLGLADTMPLEKNDPLAPVNRRISIVVLNQRAQAQFEAENASAADVTVQAQKGQAAQDVQAQLGSASAAGAGESKGK
GKGE

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=289, Percent_Identity=57.7854671280277, Blast_Score=330, Evalue=1e-91,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 35283; Mature: 35152

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAQDLRPIVIKKAKSHAKPHGNHSWKIAYADFMTAMMALFLVLWLLSSSSPKVLVGVA
CCCCHHCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH
EYFRTPLKVAIAGGDKSSLSTSVIPGGGKDVTAKDGEIMKAQTNDPAADAQRRRDQIESE
HHHCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH
RLRGLKKRLEQIIENNPVLRQFRPQLLLDITSEGLRIQILDTQNRPMFRTGSAAVEPYMR
HHHHHHHHHHHHHCCCCHHHHHCHHHEEEECCCCCEEEEEECCCCCCEECCCHHHHHHHH
TILREIGPVLNELPNKVSLSGHTDSAKYMMGQRAYSNWELSADRANASRQELVAGGMEEG
HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHHHCCCCCC
KLLRVLGLADTMPLEKNDPLAPVNRRISIVVLNQRAQAQFEAENASAADVTVQAQKGQAA
CEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHH
QDVQAQLGSASAAGAGESKGKGKGE
HHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSAQDLRPIVIKKAKSHAKPHGNHSWKIAYADFMTAMMALFLVLWLLSSSSPKVLVGVA
CCCHHCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH
EYFRTPLKVAIAGGDKSSLSTSVIPGGGKDVTAKDGEIMKAQTNDPAADAQRRRDQIESE
HHHCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH
RLRGLKKRLEQIIENNPVLRQFRPQLLLDITSEGLRIQILDTQNRPMFRTGSAAVEPYMR
HHHHHHHHHHHHHCCCCHHHHHCHHHEEEECCCCCEEEEEECCCCCCEECCCHHHHHHHH
TILREIGPVLNELPNKVSLSGHTDSAKYMMGQRAYSNWELSADRANASRQELVAGGMEEG
HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHHHCCCCCC
KLLRVLGLADTMPLEKNDPLAPVNRRISIVVLNQRAQAQFEAENASAADVTVQAQKGQAA
CEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHH
QDVQAQLGSASAAGAGESKGKGKGE
HHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9139919; 11677609; 10586519 [H]