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The map label for this gene is flhD2 [H]

Identifier: 94312617

GI number: 94312617

Start: 225427

End: 225744

Strand: Direct

Name: flhD2 [H]

Synonym: Rmet_3685

Alternate gene names: 94312617

Gene position: 225427-225744 (Clockwise)

Preceding gene: 94312616

Following gene: 94312618

Centisome position: 8.74

GC content: 56.92

Gene sequence:

>318_bases
TTGGAAAGCAGTGAAGTTCTCCAGGAGATCCGGGAGGTCAATCTCGCCTATCTTCTGCTCGCGCAACGACTGGTGCGCGA
AAACCAGGTGGAAGCCATGTTCAGGCTCGGCGTCAGCAAGGAAATTGCTGAGATCCTCGCCAAACTGACCTCGGCGCAAC
TCGTCAAGCTGGCAGCATCGAATATGGTGCTGTGCCGTTTCCGCTTCGACGATCACGCGCTGCTTTCCACTCTCACACAC
ACGGCCAAGAGCCACGATATGCAGCAGATCCACGCTGCTATCCTGCTGGCCCGGCAACCTGTGGAGTCGCTCAATTGA

Upstream 100 bases:

>100_bases
CCCATCGCACACGCAACTTATCGATCTGGTCGCCGGCAAGCAGCATCTGCCGGTAAGCGCCGGACAAGCGGTCGAGGGTT
TTTTTGGTAGCGGGGAAAAA

Downstream 100 bases:

>100_bases
CCGCGCTCCTCCAGGCCTCGCCAGCCCGCAGCTTTGCGGCCACCCCCATCCCCAACCGCAAGAGCGTCCTGCAGGACGCG
AACCAGACGCAGCTCGCCAT

Product: transcriptional activator FlhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MESSEVLQEIREVNLAYLLLAQRLVRENQVEAMFRLGVSKEIAEILAKLTSAQLVKLAASNMVLCRFRFDDHALLSTLTH
TAKSHDMQQIHAAILLARQPVESLN

Sequences:

>Translated_105_residues
MESSEVLQEIREVNLAYLLLAQRLVRENQVEAMFRLGVSKEIAEILAKLTSAQLVKLAASNMVLCRFRFDDHALLSTLTH
TAKSHDMQQIHAAILLARQPVESLN
>Mature_105_residues
MESSEVLQEIREVNLAYLLLAQRLVRENQVEAMFRLGVSKEIAEILAKLTSAQLVKLAASNMVLCRFRFDDHALLSTLTH
TAKSHDMQQIHAAILLARQPVESLN

Specific function: Transcriptional activator. Involved in the regulation of a number of genetic systems [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FlhD family [H]

Homologues:

Organism=Escherichia coli, GI145693151, Length=105, Percent_Identity=46.6666666666667, Blast_Score=107, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007911
- ProDom:   PD015582 [H]

Pfam domain/function: PF05247 FlhD [H]

EC number: NA

Molecular weight: Translated: 11841; Mature: 11841

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSEVLQEIREVNLAYLLLAQRLVRENQVEAMFRLGVSKEIAEILAKLTSAQLVKLAAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
NMVLCRFRFDDHALLSTLTHTAKSHDMQQIHAAILLARQPVESLN
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MESSEVLQEIREVNLAYLLLAQRLVRENQVEAMFRLGVSKEIAEILAKLTSAQLVKLAAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
NMVLCRFRFDDHALLSTLTHTAKSHDMQQIHAAILLARQPVESLN
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA