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The map label for this gene is 93007277

Identifier: 93007277

GI number: 93007277

Start: 3030530

End: 3031069

Strand: Reverse

Name: 93007277

Synonym: Pcryo_2453

Alternate gene names: NA

Gene position: 3031069-3030530 (Counterclockwise)

Preceding gene: 93007280

Following gene: 93007276

Centisome position: 99.06

GC content: 44.63

Gene sequence:

>540_bases
ATGAAAACTCTACAGAAAACTCTAATTGCATTAGCAGCCGGTTCATTACTAAGCATGGGTGCACAAGCTGCCGTTTCTTA
TGGCAACGGCTACACTGGTCAACCATACGTTGGTGCTAAAGTCGGTCAATTTGATTTAGACGTTGATGGCGCTGATGATC
CAACCGCATATGGCGTATATGCAGGCTACAATTTCGATCCTAACTTTGGTATGGAAGCTGAATTTGTAGGCTCAGATGAC
GCAGATTACAGGGGCGGTGACATCGACGCAAAAACTTACGGCGCTTATGGTACCTACCGTTATGCTTTCCCAAATACCGG
TCTATATGCTAAAGGTAAGCTAGGTGTTGCAAGAACTGAAATAGAAGCGACTGGTACTTCTCCAGCAGGTTTTTATAATG
GTTCAAACAAAGATACTAGCTTAGCTGGTGGTGTAGGTCTTGGCTACTCAGTAAACCCTAACTTCAGCGTTGAAGCTGAA
TATGACAAGCTAGGTAGCGACGCGGATCTAATGACCGTTGGTGCACAGCTAAAGTTCTAA

Upstream 100 bases:

>100_bases
TTGTTACTATGTATACATCGTTAGCAAACAAGGCGATATGACTAAAAATTCCACATAAATAAATAACTTGTTTGTCCACA
GTGATTTTAAGGAGATACAC

Downstream 100 bases:

>100_bases
TATTTTGATACTTAATCTCTTTATATTAAAGTATTAATAAGAACGCCCAGAATAAAAAACGATCGCTTCGGCGGTCGTTT
TTTTTTGCTTTTTTTAAGCA

Product: OmpA-like transmembrane region

Products: NA

Alternate protein names: OmpA Family Protein; Outer Membrane Protein J

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKTLQKTLIALAAGSLLSMGAQAAVSYGNGYTGQPYVGAKVGQFDLDVDGADDPTAYGVYAGYNFDPNFGMEAEFVGSDD
ADYRGGDIDAKTYGAYGTYRYAFPNTGLYAKGKLGVARTEIEATGTSPAGFYNGSNKDTSLAGGVGLGYSVNPNFSVEAE
YDKLGSDADLMTVGAQLKF

Sequences:

>Translated_179_residues
MKTLQKTLIALAAGSLLSMGAQAAVSYGNGYTGQPYVGAKVGQFDLDVDGADDPTAYGVYAGYNFDPNFGMEAEFVGSDD
ADYRGGDIDAKTYGAYGTYRYAFPNTGLYAKGKLGVARTEIEATGTSPAGFYNGSNKDTSLAGGVGLGYSVNPNFSVEAE
YDKLGSDADLMTVGAQLKF
>Mature_179_residues
MKTLQKTLIALAAGSLLSMGAQAAVSYGNGYTGQPYVGAKVGQFDLDVDGADDPTAYGVYAGYNFDPNFGMEAEFVGSDD
ADYRGGDIDAKTYGAYGTYRYAFPNTGLYAKGKLGVARTEIEATGTSPAGFYNGSNKDTSLAGGVGLGYSVNPNFSVEAE
YDKLGSDADLMTVGAQLKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18645; Mature: 18645

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLQKTLIALAAGSLLSMGAQAAVSYGNGYTGQPYVGAKVGQFDLDVDGADDPTAYGVY
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEE
AGYNFDPNFGMEAEFVGSDDADYRGGDIDAKTYGAYGTYRYAFPNTGLYAKGKLGVARTE
ECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCCEEECCCCCEEEEE
IEATGTSPAGFYNGSNKDTSLAGGVGLGYSVNPNFSVEAEYDKLGSDADLMTVGAQLKF
EEECCCCCCCCCCCCCCCCEEECCCCCCEECCCCEEEEEHHHHCCCCCCEEEECEEECC
>Mature Secondary Structure
MKTLQKTLIALAAGSLLSMGAQAAVSYGNGYTGQPYVGAKVGQFDLDVDGADDPTAYGVY
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEE
AGYNFDPNFGMEAEFVGSDDADYRGGDIDAKTYGAYGTYRYAFPNTGLYAKGKLGVARTE
ECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCCEEECCCCCEEEEE
IEATGTSPAGFYNGSNKDTSLAGGVGLGYSVNPNFSVEAEYDKLGSDADLMTVGAQLKF
EEECCCCCCCCCCCCCCCCEEECCCCCCEECCCCEEEEEHHHHCCCCCCEEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA