Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006976
Identifier: 93006976
GI number: 93006976
Start: 2635254
End: 2636078
Strand: Reverse
Name: 93006976
Synonym: Pcryo_2152
Alternate gene names: NA
Gene position: 2636078-2635254 (Counterclockwise)
Preceding gene: 93006977
Following gene: 93006969
Centisome position: 86.15
GC content: 45.45
Gene sequence:
>825_bases ATGTCGCGTTTGTCCATTTGGTCAATCACAACGTCGTGCAGTGCATTATTACTTACTCTCGGTGCAGTCGGTCAAGTTCA CGCCGATAGTATGAGCAGCTTAATTGCTCAAAAATCTTCTCTAACTGATTATAGCGCCCGCTATACACCATCGTACCCCG CTGTCCCTGCTGCTAAAATCAGTACGCGATCCACTATCCAACGTGCTGGTACTTCTAATAGTTATCGTTCGAATACAGAC AATACACAACCAAGTTATTCTAATAGTAGCTATGCTAATAAAACCTACTCTAACCAAAATGCTTATGTTAGCAACAACCA ACCTAATTATCGTTATCCTGAAGTACAACGCCAAGTATCATCAGTTTTGCCGGCATTTTTATCAGGCAACTATGATAATG TCGATAGCGAGTATCTACCGTTACTCAGCAATGCCGAAACGCAAAGTAGTCTGGCTGCCCGTGAAGTAATTAGCACTGCC CGTAAAATGGCGCTGAACGAGCGTACGATTATTCAAGGCGGCTGCTGGGATTATCTGAATGCGGTGTTCAAACGAGCCGG GGTGACGCGCGATACCATCCATAAAGGTACCTATGGTCAAGGTCCTTATGCCAATAGTGGTGAAATCGAAGTTGGTGACT GGCTCTACTATATCAATCATGGTTATAACGGTGTCGAGCACAGCGGATTGTTTGTCGGCTGGGTTGATGAGCAAGCAAAG CAAGCGCTGATATTAAGCTATGCTGGCGAGAGCCGCCGCGAGCCTGCGCGCTATCGTGTTTATGATTTGAGCAATGTCTA TCAAATTATGCGCCCGAACGTTTAA
Upstream 100 bases:
>100_bases AAATGGTTTATAAGTAAGATTGAAAAAATCTCATCATACTTATAATGAATACGGTTATCGCTACTATGGTTATTGATACT ATATTGACAAGGAGCTAGTC
Downstream 100 bases:
>100_bases TATAGACCTTCTTAATATATAGTTAGAATATCTCAAAAACGCTACAGTGCTGCTGGTATAAATTTTTTGCAGCCTCTGTC TGCATAGGCACAGCAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSRLSIWSITTSCSALLLTLGAVGQVHADSMSSLIAQKSSLTDYSARYTPSYPAVPAAKISTRSTIQRAGTSNSYRSNTD NTQPSYSNSSYANKTYSNQNAYVSNNQPNYRYPEVQRQVSSVLPAFLSGNYDNVDSEYLPLLSNAETQSSLAAREVISTA RKMALNERTIIQGGCWDYLNAVFKRAGVTRDTIHKGTYGQGPYANSGEIEVGDWLYYINHGYNGVEHSGLFVGWVDEQAK QALILSYAGESRREPARYRVYDLSNVYQIMRPNV
Sequences:
>Translated_274_residues MSRLSIWSITTSCSALLLTLGAVGQVHADSMSSLIAQKSSLTDYSARYTPSYPAVPAAKISTRSTIQRAGTSNSYRSNTD NTQPSYSNSSYANKTYSNQNAYVSNNQPNYRYPEVQRQVSSVLPAFLSGNYDNVDSEYLPLLSNAETQSSLAAREVISTA RKMALNERTIIQGGCWDYLNAVFKRAGVTRDTIHKGTYGQGPYANSGEIEVGDWLYYINHGYNGVEHSGLFVGWVDEQAK QALILSYAGESRREPARYRVYDLSNVYQIMRPNV >Mature_273_residues SRLSIWSITTSCSALLLTLGAVGQVHADSMSSLIAQKSSLTDYSARYTPSYPAVPAAKISTRSTIQRAGTSNSYRSNTDN TQPSYSNSSYANKTYSNQNAYVSNNQPNYRYPEVQRQVSSVLPAFLSGNYDNVDSEYLPLLSNAETQSSLAAREVISTAR KMALNERTIIQGGCWDYLNAVFKRAGVTRDTIHKGTYGQGPYANSGEIEVGDWLYYINHGYNGVEHSGLFVGWVDEQAKQ ALILSYAGESRREPARYRVYDLSNVYQIMRPNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30390; Mature: 30259
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLSIWSITTSCSALLLTLGAVGQVHADSMSSLIAQKSSLTDYSARYTPSYPAVPAAKI CCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH STRSTIQRAGTSNSYRSNTDNTQPSYSNSSYANKTYSNQNAYVSNNQPNYRYPEVQRQVS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHH SVLPAFLSGNYDNVDSEYLPLLSNAETQSSLAAREVISTARKMALNERTIIQGGCWDYLN HHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH AVFKRAGVTRDTIHKGTYGQGPYANSGEIEVGDWLYYINHGYNGVEHSGLFVGWVDEQAK HHHHHCCCCHHHHCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEEECCHHHH QALILSYAGESRREPARYRVYDLSNVYQIMRPNV HEEEEEECCCCCCCCCCEEEEEHHHHHHHHCCCC >Mature Secondary Structure SRLSIWSITTSCSALLLTLGAVGQVHADSMSSLIAQKSSLTDYSARYTPSYPAVPAAKI CCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH STRSTIQRAGTSNSYRSNTDNTQPSYSNSSYANKTYSNQNAYVSNNQPNYRYPEVQRQVS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHH SVLPAFLSGNYDNVDSEYLPLLSNAETQSSLAAREVISTARKMALNERTIIQGGCWDYLN HHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH AVFKRAGVTRDTIHKGTYGQGPYANSGEIEVGDWLYYINHGYNGVEHSGLFVGWVDEQAK HHHHHCCCCHHHHCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEEECCHHHH QALILSYAGESRREPARYRVYDLSNVYQIMRPNV HEEEEEECCCCCCCCCCEEEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA