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The map label for this gene is nylB' [H]

Identifier: 93006952

GI number: 93006952

Start: 2605210

End: 2606529

Strand: Direct

Name: nylB' [H]

Synonym: Pcryo_2128

Alternate gene names: 93006952

Gene position: 2605210-2606529 (Clockwise)

Preceding gene: 93006951

Following gene: 93006954

Centisome position: 85.14

GC content: 47.58

Gene sequence:

>1320_bases
ATGCTGACACTACAACACTCTTTTGCCCTATTACCGCTAACTTTAGCCCTAGGGCTGACGAGTGTAAGCGGTCATGCTGA
AAACACTTCTTTAACCGCTAAGGAATCAGACCCGCAAACGCTTGGCTGGAGGCAAGGTTTCCCGCCTCCAAAAGGCAAGC
TAATCACTCAACCACAGTCGGACTTTTTTAGTTTTCCCAAACTGCGTTGGACAGTCTGTCATATTCGAGAGCTAATGCCC
ACTACCGAAGTCAGTCGCGGTATCGGTGCACCATCCAAACTTGACTATGCACTCGATAAAAATATTGATGCCATTACCTT
TACCCCAACCAATAGCAAACGCCCTATGACATGGCGGCAGTCACTTGATGCCAACTATACAGACGGCATTATGATCCTGC
ATCATGGCAAGGTCGTCTATGAGCGTCAAAATGGTTGCCTCAATGAGCTGGGTAATCACGCCGCAATGTCGATGACCAAG
TCAATGACAGGATTATTAGCAGAAATCCTCGTCACCGAAGGTAAGCTTGATGATAAGGCATTGGTTGCCTCTATTATTCC
TGAGCTGGCAAAAAGTGGCTTTGGCGATGCCACCGTACGCCAAGTGATGGATATGACCACGGCGCTCGATTATAGTGAAG
ACTATGCCGATCCTGACGCAGACATCTGGAAGTATTCAGAAGCGGCAAGCCCGTTACCAAAACCCAAAGGCTATAGCGGA
CCCAATGGCTATTTTGAATATCTGCAAACGGTACCTAAAAAGGGCGAGCACGGTGTAGAGTTTAACTATCGAACCATCAA
TAGTGATGCACTCGGCTGGATTATTTCACGCACCACTGGCAAGGCAATCGATGACCTGCTCTCTGAACGTATCTGGCAAA
AAATCGGTGCCGAACAAAGCGCGTATATGACGGTCGATGCTAAGGGTACGCCGTTTGCTGGCGGCGGCATCAGTGCAGGT
TTGCATGATATGGCACGTATTGGCAGCTTGATGCTCAATAAAGGCGAGATGAATGGTGAGCGCTTATTCCCAACAGCGGT
AGTCGATAATATCGAAGCTGGCGGTGATAAAGGCGCATTTGCAAAAGCGGGCTATAAACAGCTCAATAATGGCAGCTATA
AAAGTATGTGGTGGCTGTTTAATAATCCCACGCCTATTTATGCAGCACGTGGCGTCCACGGTCAAACGGTCTATGTTGAT
CCAGCAGCCGATATGGTCATCGTTCGCTTTTCCTCATACCCTGAAGCCAGTAATGGTAAAATCGACCCAACTTCGCTACC
TGCCTATAAAGCAGTCGCTAATTACTTAATTAAAAAGTAA

Upstream 100 bases:

>100_bases
AAGCAAGTAGTAAAGACCGTTGATAAGAATTAAGCTCAAATCTTATCAATGGTTTTTTATTGCCTAATGTTAACTGCTTA
AGCTAAGTCGCGAGGATACC

Downstream 100 bases:

>100_bases
GCCTTTAAGAAATAGCGCTTTAAAATACTCAACCAAAACAAAACCGCCGCTTTCAATATAAATACTGGAAGCGGCGGTTT
TTTATATAGATACTGATTTT

Product: 6-aminohexanoate-dimer hydrolase

Products: NA

Alternate protein names: Nylon oligomers-degrading enzyme EII' [H]

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MLTLQHSFALLPLTLALGLTSVSGHAENTSLTAKESDPQTLGWRQGFPPPKGKLITQPQSDFFSFPKLRWTVCHIRELMP
TTEVSRGIGAPSKLDYALDKNIDAITFTPTNSKRPMTWRQSLDANYTDGIMILHHGKVVYERQNGCLNELGNHAAMSMTK
SMTGLLAEILVTEGKLDDKALVASIIPELAKSGFGDATVRQVMDMTTALDYSEDYADPDADIWKYSEAASPLPKPKGYSG
PNGYFEYLQTVPKKGEHGVEFNYRTINSDALGWIISRTTGKAIDDLLSERIWQKIGAEQSAYMTVDAKGTPFAGGGISAG
LHDMARIGSLMLNKGEMNGERLFPTAVVDNIEAGGDKGAFAKAGYKQLNNGSYKSMWWLFNNPTPIYAARGVHGQTVYVD
PAADMVIVRFSSYPEASNGKIDPTSLPAYKAVANYLIKK

Sequences:

>Translated_439_residues
MLTLQHSFALLPLTLALGLTSVSGHAENTSLTAKESDPQTLGWRQGFPPPKGKLITQPQSDFFSFPKLRWTVCHIRELMP
TTEVSRGIGAPSKLDYALDKNIDAITFTPTNSKRPMTWRQSLDANYTDGIMILHHGKVVYERQNGCLNELGNHAAMSMTK
SMTGLLAEILVTEGKLDDKALVASIIPELAKSGFGDATVRQVMDMTTALDYSEDYADPDADIWKYSEAASPLPKPKGYSG
PNGYFEYLQTVPKKGEHGVEFNYRTINSDALGWIISRTTGKAIDDLLSERIWQKIGAEQSAYMTVDAKGTPFAGGGISAG
LHDMARIGSLMLNKGEMNGERLFPTAVVDNIEAGGDKGAFAKAGYKQLNNGSYKSMWWLFNNPTPIYAARGVHGQTVYVD
PAADMVIVRFSSYPEASNGKIDPTSLPAYKAVANYLIKK
>Mature_439_residues
MLTLQHSFALLPLTLALGLTSVSGHAENTSLTAKESDPQTLGWRQGFPPPKGKLITQPQSDFFSFPKLRWTVCHIRELMP
TTEVSRGIGAPSKLDYALDKNIDAITFTPTNSKRPMTWRQSLDANYTDGIMILHHGKVVYERQNGCLNELGNHAAMSMTK
SMTGLLAEILVTEGKLDDKALVASIIPELAKSGFGDATVRQVMDMTTALDYSEDYADPDADIWKYSEAASPLPKPKGYSG
PNGYFEYLQTVPKKGEHGVEFNYRTINSDALGWIISRTTGKAIDDLLSERIWQKIGAEQSAYMTVDAKGTPFAGGGISAG
LHDMARIGSLMLNKGEMNGERLFPTAVVDNIEAGGDKGAFAKAGYKQLNNGSYKSMWWLFNNPTPIYAARGVHGQTVYVD
PAADMVIVRFSSYPEASNGKIDPTSLPAYKAVANYLIKK

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: =3.5.1.46 [H]

Molecular weight: Translated: 47992; Mature: 47992

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLQHSFALLPLTLALGLTSVSGHAENTSLTAKESDPQTLGWRQGFPPPKGKLITQPQS
CEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCH
DFFSFPKLRWTVCHIRELMPTTEVSRGIGAPSKLDYALDKNIDAITFTPTNSKRPMTWRQ
HHHCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHCCCCCEEEECCCCCCCCCHHHH
SLDANYTDGIMILHHGKVVYERQNGCLNELGNHAAMSMTKSMTGLLAEILVTEGKLDDKA
HCCCCCCCCEEEEECCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LVASIIPELAKSGFGDATVRQVMDMTTALDYSEDYADPDADIWKYSEAASPLPKPKGYSG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCCCCHHHHCCHHHCCCCCCCCCCCC
PNGYFEYLQTVPKKGEHGVEFNYRTINSDALGWIISRTTGKAIDDLLSERIWQKIGAEQS
CCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCC
AYMTVDAKGTPFAGGGISAGLHDMARIGSLMLNKGEMNGERLFPTAVVDNIEAGGDKGAF
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHCCCCCCCCCCH
AKAGYKQLNNGSYKSMWWLFNNPTPIYAARGVHGQTVYVDPAADMVIVRFSSYPEASNGK
HHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCEEEECCCCCEEEEEECCCCCCCCCC
IDPTSLPAYKAVANYLIKK
CCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLTLQHSFALLPLTLALGLTSVSGHAENTSLTAKESDPQTLGWRQGFPPPKGKLITQPQS
CEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCH
DFFSFPKLRWTVCHIRELMPTTEVSRGIGAPSKLDYALDKNIDAITFTPTNSKRPMTWRQ
HHHCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHCCCCCEEEECCCCCCCCCHHHH
SLDANYTDGIMILHHGKVVYERQNGCLNELGNHAAMSMTKSMTGLLAEILVTEGKLDDKA
HCCCCCCCCEEEEECCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LVASIIPELAKSGFGDATVRQVMDMTTALDYSEDYADPDADIWKYSEAASPLPKPKGYSG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCCCCHHHHCCHHHCCCCCCCCCCCC
PNGYFEYLQTVPKKGEHGVEFNYRTINSDALGWIISRTTGKAIDDLLSERIWQKIGAEQS
CCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCC
AYMTVDAKGTPFAGGGISAGLHDMARIGSLMLNKGEMNGERLFPTAVVDNIEAGGDKGAF
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHCCCCCCCCCCH
AKAGYKQLNNGSYKSMWWLFNNPTPIYAARGVHGQTVYVDPAADMVIVRFSSYPEASNGK
HHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCCEEEECCCCCEEEEEECCCCCCCCCC
IDPTSLPAYKAVANYLIKK
CCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6646204; 6389532; 1879421 [H]