Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is gltP [H]
Identifier: 93006945
GI number: 93006945
Start: 2597213
End: 2598586
Strand: Direct
Name: gltP [H]
Synonym: Pcryo_2121
Alternate gene names: 93006945
Gene position: 2597213-2598586 (Clockwise)
Preceding gene: 93006944
Following gene: 93006947
Centisome position: 84.88
GC content: 44.03
Gene sequence:
>1374_bases ATGTGGAAAAATATGGGTTTGACCGGCAAAATTATTGTTGCCATGGTGCTCGGTATTATACTGGGTCTATTTATAAACTA CTCTGGCTTGAACACGGAAGGCAGCTTTGTTAATAATTATGTCACCAACGGTTTTCTTGCCATTGTCGGTAAGCTGTTTG TTAACTCGCTAAAAATGCTCGTCGTGCCACTGGTCTTGATTTCACTAATCTGCGGCGTATGCGGTATCGGTGATATTCGT CTATTAGGGCGTATTGGTACTAAAACCTTTTTCATCTATATGGTGACGACAGCACTGGCGATTGCAACTGCTATTGGGCT TGGCGTGCTGTTTGGTATCGGCAAAGGCATGAATATAGCAACAGAGGCGGCGTTTGAAGCTGAGAAAGCGCCACCACTAC TCGATGTATTTTCCAATATTATTCCCTCTAACCCCATCAGTGCGATGGCAAACGGCGACATGCTATCGATTATCTTCTTT GCCGTTTTGATTGGTATTAGTATTTTGATGGTAGGAAAACCCGCTAAAGGCTTAGTTCAAAGTTTAGAGCTCATCAATGA AGTCATCTTAAAAATGGTGACTATCATTATGAATCTTGCACCATATGGTGTCTTTGCGCTATTGACCAAAGCAATGGCAG AGCTTGGCTTAGACCTGATTTGGTCATTACTTGGTTATGTTGCGGTACTGGTTGGTTCACTGGCATTCCATTTCTTTGTG ACCATGATGATTGTCCTCAAGCTGTCTTCAGGCTTGTCAGTCAGAACGTTTTTGGCAAAAATGCGCGAAGTACAGATTTT TGCTTTTAGTACTTCAAGCTCGAATGCAACGATTCCAATTACCTTGCGCACGGTCACCAAGCGCATGGGTGTTAATAACT CAGTTGCTTCATTCACCATCCCTTTTGGCGCGACGATCAACATGGATGGTACAGCCATCATGCAAGGCACAGCGACCATT TTTATTGCCAATATTTATGGTATTGACTTGGGTATAACTGAGTATTTGACCGTTATTTTGATGTCAGTGCTCGCCTCTGT CGGTACGGCAGGTGTTCCGGGTGTTGGTCTAATCATGCTGTCAATGGTATTTGCCCAAGTCGGTCTACCGATTGAAGGTA TTGGTCTTATTTTAGGGGTCGACCGTATCCTTGATATGTTACGTACAGCAGTCAATGTCGGCGGTGATGCTGCGGTGACC GCTATCGTCGCAAAATCAGAAGGTAAAATGGATTTAGCGATTTATAACGATCCTGATGCTGGCTCAAAAGATGTCTTTGA CGGTCATATCGATGAGAACAGCGAACGCGAATTCTCTGAAGTCTTTAGCGATGGCATTATGGGCAGCGAGTATGACGATG TTAAGCGCGGCTAA
Upstream 100 bases:
>100_bases TATAGACGTCACAGCAACAGTCATGACAGCAATCTTGCACTCATATTGAGCGCGCTATTGTGTCTATTGCTGTGCGTAAC GGACACCAAGGATAGCGTTT
Downstream 100 bases:
>100_bases TCGTGATCAGTGATTGCCTATAAATAAGTCATAAAAAAACCTCAGCCGATTGGTCTGAGGTTTTTTTATGCAGCAAGTAG GTTTTTAGACCAAGAGTTGC
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MWKNMGLTGKIIVAMVLGIILGLFINYSGLNTEGSFVNNYVTNGFLAIVGKLFVNSLKMLVVPLVLISLICGVCGIGDIR LLGRIGTKTFFIYMVTTALAIATAIGLGVLFGIGKGMNIATEAAFEAEKAPPLLDVFSNIIPSNPISAMANGDMLSIIFF AVLIGISILMVGKPAKGLVQSLELINEVILKMVTIIMNLAPYGVFALLTKAMAELGLDLIWSLLGYVAVLVGSLAFHFFV TMMIVLKLSSGLSVRTFLAKMREVQIFAFSTSSSNATIPITLRTVTKRMGVNNSVASFTIPFGATINMDGTAIMQGTATI FIANIYGIDLGITEYLTVILMSVLASVGTAGVPGVGLIMLSMVFAQVGLPIEGIGLILGVDRILDMLRTAVNVGGDAAVT AIVAKSEGKMDLAIYNDPDAGSKDVFDGHIDENSEREFSEVFSDGIMGSEYDDVKRG
Sequences:
>Translated_457_residues MWKNMGLTGKIIVAMVLGIILGLFINYSGLNTEGSFVNNYVTNGFLAIVGKLFVNSLKMLVVPLVLISLICGVCGIGDIR LLGRIGTKTFFIYMVTTALAIATAIGLGVLFGIGKGMNIATEAAFEAEKAPPLLDVFSNIIPSNPISAMANGDMLSIIFF AVLIGISILMVGKPAKGLVQSLELINEVILKMVTIIMNLAPYGVFALLTKAMAELGLDLIWSLLGYVAVLVGSLAFHFFV TMMIVLKLSSGLSVRTFLAKMREVQIFAFSTSSSNATIPITLRTVTKRMGVNNSVASFTIPFGATINMDGTAIMQGTATI FIANIYGIDLGITEYLTVILMSVLASVGTAGVPGVGLIMLSMVFAQVGLPIEGIGLILGVDRILDMLRTAVNVGGDAAVT AIVAKSEGKMDLAIYNDPDAGSKDVFDGHIDENSEREFSEVFSDGIMGSEYDDVKRG >Mature_457_residues MWKNMGLTGKIIVAMVLGIILGLFINYSGLNTEGSFVNNYVTNGFLAIVGKLFVNSLKMLVVPLVLISLICGVCGIGDIR LLGRIGTKTFFIYMVTTALAIATAIGLGVLFGIGKGMNIATEAAFEAEKAPPLLDVFSNIIPSNPISAMANGDMLSIIFF AVLIGISILMVGKPAKGLVQSLELINEVILKMVTIIMNLAPYGVFALLTKAMAELGLDLIWSLLGYVAVLVGSLAFHFFV TMMIVLKLSSGLSVRTFLAKMREVQIFAFSTSSSNATIPITLRTVTKRMGVNNSVASFTIPFGATINMDGTAIMQGTATI FIANIYGIDLGITEYLTVILMSVLASVGTAGVPGVGLIMLSMVFAQVGLPIEGIGLILGVDRILDMLRTAVNVGGDAAVT AIVAKSEGKMDLAIYNDPDAGSKDVFDGHIDENSEREFSEVFSDGIMGSEYDDVKRG
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI40254478, Length=467, Percent_Identity=29.1220556745182, Blast_Score=161, Evalue=9e-40, Organism=Homo sapiens, GI169790839, Length=443, Percent_Identity=27.9909706546275, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI66773030, Length=462, Percent_Identity=29.4372294372294, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI21314632, Length=427, Percent_Identity=29.03981264637, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI5032093, Length=372, Percent_Identity=30.9139784946237, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI4827012, Length=284, Percent_Identity=34.1549295774648, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI194239697, Length=299, Percent_Identity=30.7692307692308, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI223468564, Length=247, Percent_Identity=31.5789473684211, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI223468566, Length=256, Percent_Identity=31.25, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI262359914, Length=384, Percent_Identity=25.2604166666667, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI301601644, Length=171, Percent_Identity=33.9181286549708, Blast_Score=105, Evalue=9e-23, Organism=Escherichia coli, GI1790514, Length=447, Percent_Identity=34.8993288590604, Blast_Score=245, Evalue=4e-66, Organism=Escherichia coli, GI1789947, Length=438, Percent_Identity=27.6255707762557, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1788024, Length=404, Percent_Identity=29.2079207920792, Blast_Score=121, Evalue=8e-29, Organism=Escherichia coli, GI1789473, Length=381, Percent_Identity=25.9842519685039, Blast_Score=102, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71983099, Length=440, Percent_Identity=30.9090909090909, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI71983106, Length=440, Percent_Identity=30.9090909090909, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17537407, Length=389, Percent_Identity=33.4190231362468, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71996953, Length=446, Percent_Identity=28.9237668161435, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI193206505, Length=458, Percent_Identity=28.82096069869, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17541374, Length=392, Percent_Identity=28.0612244897959, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI193206654, Length=407, Percent_Identity=25.0614250614251, Blast_Score=131, Evalue=7e-31, Organism=Drosophila melanogaster, GI24583025, Length=462, Percent_Identity=28.1385281385281, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI17137668, Length=462, Percent_Identity=28.1385281385281, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI24583023, Length=462, Percent_Identity=28.1385281385281, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI281360481, Length=474, Percent_Identity=27.6371308016878, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI281360483, Length=474, Percent_Identity=27.6371308016878, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI17137666, Length=474, Percent_Identity=27.6371308016878, Blast_Score=117, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 48390; Mature: 48390
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKNMGLTGKIIVAMVLGIILGLFINYSGLNTEGSFVNNYVTNGFLAIVGKLFVNSLKML CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVPLVLISLICGVCGIGDIRLLGRIGTKTFFIYMVTTALAIATAIGLGVLFGIGKGMNIA HHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TEAAFEAEKAPPLLDVFSNIIPSNPISAMANGDMLSIIFFAVLIGISILMVGKPAKGLVQ HHHHHHHCCCCCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH SLELINEVILKMVTIIMNLAPYGVFALLTKAMAELGLDLIWSLLGYVAVLVGSLAFHFFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMMIVLKLSSGLSVRTFLAKMREVQIFAFSTSSSNATIPITLRTVTKRMGVNNSVASFTI HHHHHHHHCCCCHHHHHHHHHHHEEEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCEEEE PFGATINMDGTAIMQGTATIFIANIYGIDLGITEYLTVILMSVLASVGTAGVPGVGLIML CCCCEECCCCCEEEECCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SMVFAQVGLPIEGIGLILGVDRILDMLRTAVNVGGDAAVTAIVAKSEGKMDLAIYNDPDA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCEEEEEECCCCC GSKDVFDGHIDENSEREFSEVFSDGIMGSEYDDVKRG CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure MWKNMGLTGKIIVAMVLGIILGLFINYSGLNTEGSFVNNYVTNGFLAIVGKLFVNSLKML CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVPLVLISLICGVCGIGDIRLLGRIGTKTFFIYMVTTALAIATAIGLGVLFGIGKGMNIA HHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TEAAFEAEKAPPLLDVFSNIIPSNPISAMANGDMLSIIFFAVLIGISILMVGKPAKGLVQ HHHHHHHCCCCCHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH SLELINEVILKMVTIIMNLAPYGVFALLTKAMAELGLDLIWSLLGYVAVLVGSLAFHFFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMMIVLKLSSGLSVRTFLAKMREVQIFAFSTSSSNATIPITLRTVTKRMGVNNSVASFTI HHHHHHHHCCCCHHHHHHHHHHHEEEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCEEEE PFGATINMDGTAIMQGTATIFIANIYGIDLGITEYLTVILMSVLASVGTAGVPGVGLIML CCCCEECCCCCEEEECCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SMVFAQVGLPIEGIGLILGVDRILDMLRTAVNVGGDAAVTAIVAKSEGKMDLAIYNDPDA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCEEEEEECCCCC GSKDVFDGHIDENSEREFSEVFSDGIMGSEYDDVKRG CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]