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The map label for this gene is yocS [H]

Identifier: 93006896

GI number: 93006896

Start: 2538994

End: 2539851

Strand: Direct

Name: yocS [H]

Synonym: Pcryo_2072

Alternate gene names: 93006896

Gene position: 2538994-2539851 (Clockwise)

Preceding gene: 93006895

Following gene: 93006897

Centisome position: 82.98

GC content: 44.06

Gene sequence:

>858_bases
ATGAGTAATACCGCATTAGCTCTGCTGCCATTAGCCCTTGCTTATATTATGTTTACCTTAGGAACAGGGCTTAAGCCCAG
TGACTTTAAGGTTATTGCAAGTCACCCCAAAGCATTCTTTATAGGGTTGATTAACCAAGTTGTCTTTGTACCACTCGTGG
CTTTAGCGGTCGTCTTACTGATGTCGCCACCACCTGCCATCGCCTTTGGTATTATGCTGATTAGCTTTTGTCCCGGCGGC
GTGACCAGTAATATGCTCACCTACTATGCCAAGGGTAACGTAGCACTGTCGGTCGCGCTCACGGGCGTAGTCAGTCTATT
ATCGGTGGTGACCCTGCCTATCTTAATCACCTTGGCTTTCAATCACTTTATGAAAGACCAAGCAGGCTCTATCAGTGCAG
TAAAAATCGGCGTTGTCATGTTTTTATTGACCACCTTGCCAGTGACGATAGGTATGCTCGCCCGTTATAAATTCACTGAT
TTTATGGTGCGTAGAAGCGGCATCTTAAATGGCTTAGCCAGTGTCTTTTTTGTCTTAATCGTCCTTGCTGCTATTGCTAC
CAACTGGCAGCTATTACAGGAGCAATTGGCTTCTATTGGACTTGAGCTTGTGCTGATTATTGTCACCTTATTTATCATCA
GTATTTTGACGGCAAAGGCGTTACAGCTAAGCTGGTTTGATACCAAAACCATCGCTATAGAAACCAGTATTCAAAACAGT
ACGACCGCGATTACCTTAGCCCCTATTATTATGGGCGTGAGTACATTGCCAGTTATTGCCTTACCTGCTGCCTTGTATGG
CGTACTAATGTATGTGATTGCACTGCCGATTATTTTTCTGATTAGGAATAAAAACTGA

Upstream 100 bases:

>100_bases
AAGACTATATTTTAGATGCTGTAAAGCAATATATCGCCACAAGGAATGGGCGTTATAAATATAATGCAAGTATAACCGTT
AACTTTACAAGGAATGTTCC

Downstream 100 bases:

>100_bases
TTGAATAAGTAAGCCTTAATGAGACTATAAGCTATGCCCGTCCAAATTTCGGATGGGCATTTGCACAATGAAATACCTAA
ATAACGAGATCGTTTAATTC

Product: bile acid:sodium symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSNTALALLPLALAYIMFTLGTGLKPSDFKVIASHPKAFFIGLINQVVFVPLVALAVVLLMSPPPAIAFGIMLISFCPGG
VTSNMLTYYAKGNVALSVALTGVVSLLSVVTLPILITLAFNHFMKDQAGSISAVKIGVVMFLLTTLPVTIGMLARYKFTD
FMVRRSGILNGLASVFFVLIVLAAIATNWQLLQEQLASIGLELVLIIVTLFIISILTAKALQLSWFDTKTIAIETSIQNS
TTAITLAPIIMGVSTLPVIALPAALYGVLMYVIALPIIFLIRNKN

Sequences:

>Translated_285_residues
MSNTALALLPLALAYIMFTLGTGLKPSDFKVIASHPKAFFIGLINQVVFVPLVALAVVLLMSPPPAIAFGIMLISFCPGG
VTSNMLTYYAKGNVALSVALTGVVSLLSVVTLPILITLAFNHFMKDQAGSISAVKIGVVMFLLTTLPVTIGMLARYKFTD
FMVRRSGILNGLASVFFVLIVLAAIATNWQLLQEQLASIGLELVLIIVTLFIISILTAKALQLSWFDTKTIAIETSIQNS
TTAITLAPIIMGVSTLPVIALPAALYGVLMYVIALPIIFLIRNKN
>Mature_284_residues
SNTALALLPLALAYIMFTLGTGLKPSDFKVIASHPKAFFIGLINQVVFVPLVALAVVLLMSPPPAIAFGIMLISFCPGGV
TSNMLTYYAKGNVALSVALTGVVSLLSVVTLPILITLAFNHFMKDQAGSISAVKIGVVMFLLTTLPVTIGMLARYKFTDF
MVRRSGILNGLASVFFVLIVLAAIATNWQLLQEQLASIGLELVLIIVTLFIISILTAKALQLSWFDTKTIAIETSIQNST
TAITLAPIIMGVSTLPVIALPAALYGVLMYVIALPIIFLIRNKN

Specific function: Unknown

COG id: COG0385

COG function: function code R; Predicted Na+-dependent transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:bile acid symporter family [H]

Homologues:

Organism=Homo sapiens, GI4506973, Length=245, Percent_Identity=26.9387755102041, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI37537552, Length=241, Percent_Identity=24.4813278008299, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004710
- InterPro:   IPR002657 [H]

Pfam domain/function: PF01758 SBF [H]

EC number: NA

Molecular weight: Translated: 30442; Mature: 30310

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTALALLPLALAYIMFTLGTGLKPSDFKVIASHPKAFFIGLINQVVFVPLVALAVVLL
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
MSPPPAIAFGIMLISFCPGGVTSNMLTYYAKGNVALSVALTGVVSLLSVVTLPILITLAF
CCCCHHHHHHHHHHHHCCCCHHHHHHHEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
NHFMKDQAGSISAVKIGVVMFLLTTLPVTIGMLARYKFTDFMVRRSGILNGLASVFFVLI
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAAIATNWQLLQEQLASIGLELVLIIVTLFIISILTAKALQLSWFDTKTIAIETSIQNS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCCC
TTAITLAPIIMGVSTLPVIALPAALYGVLMYVIALPIIFLIRNKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNTALALLPLALAYIMFTLGTGLKPSDFKVIASHPKAFFIGLINQVVFVPLVALAVVLL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
MSPPPAIAFGIMLISFCPGGVTSNMLTYYAKGNVALSVALTGVVSLLSVVTLPILITLAF
CCCCHHHHHHHHHHHHCCCCHHHHHHHEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
NHFMKDQAGSISAVKIGVVMFLLTTLPVTIGMLARYKFTDFMVRRSGILNGLASVFFVLI
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAAIATNWQLLQEQLASIGLELVLIIVTLFIISILTAKALQLSWFDTKTIAIETSIQNS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCCC
TTAITLAPIIMGVSTLPVIALPAALYGVLMYVIALPIIFLIRNKN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]