Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is mviN [H]
Identifier: 93006863
GI number: 93006863
Start: 2506030
End: 2507580
Strand: Direct
Name: mviN [H]
Synonym: Pcryo_2039
Alternate gene names: 93006863
Gene position: 2506030-2507580 (Clockwise)
Preceding gene: 93006862
Following gene: 93006864
Centisome position: 81.9
GC content: 45.33
Gene sequence:
>1551_bases ATGGCAAAAAGTCGGTTATTTCGTTCAACCATGGTAGTCAGCAGTATGACCATGCTATCTCGTATTTTAGGTCTGGTACG CGATATCGTATTACTAGGTGTCTTTGGCGCTGGCGGTCTGATGGACGCTTTCTTGGTCGCCTTTAAGATACCGAACTTTC TGCGACGCCTGTTTGCTGAAGGCGCATTTAGTCAGGCCTTTGTACCTGTTTTATCTGAATATAAAGAAAAATATAGTCTA CGAGAAGTACAGATATTAGTCAGTCGCACGTCAGGCGCGCTGATGTTAATTTTATCGATGCTGACCGTAGTGGTTATTTT AATGGCACCGTGGGTCGTGACTTTATTTGCGCCCGGTTTTGCTGATCAACCTGATAAGTTTGCGATTACCGCTGAGCTGT TGCGCCTAACCTTCCCTTACTTATTATTTATCTCCATGACCGCTTTTGCCAGTGGCATTTTACAAAGTTACGGACGTTTT GCGGCACCAGCCTTTGCACCTGTATTACTCAATCTGTGTATGATTGGTGGCGCGCTGGTTTTTGCACCTATGTTTGAGAC GCCCATTATGGCGCTCGGTTATGCGGTCGCTATCGCCGGTTTATTACAGCTCCTACTGCAATTGCCGCAGTTATCCCAGC AAAAACTACTGGTGATGCCCAAAATCGACTTCCAGCATGAAGGCGTCAGACGCATATTAAAGCTGATGCTACCTGCTATC TTTGGGGTATCGGTTACTCAAATTAATCTGCTATTAAATACTATCTTTGCCTCTTTGATGATTGGCGGCTCAGTCTCGTG GCTATATGCCGCTGAGCGTATGAGCGAGTTACCCCTTGGTTTAATTGGTGTGGCAATTGGTACAGTCATTTTACCAAGCC TATCAAAAAGTGAAGCCCAAAAAGACGATGTCAGTTTTAAAAAGACCATCGATTGGGCAGCTCGCTTAATTATCTTAGTC GGTGTACCTGCATCGGCAGCACTGTTTATTCTGTCTGACGTGCTCATGCAAGCGCTATTTTTACGTGGCGAATTTACGTT ACGTGATGCGCAAATGAGTTCGCTTGCGCTAAAAAGCATGGCGGGTGGCATCTTAGGCTTTATGTTGATTAAAGTCTTTG CCCCTGCGTTTTTTGCTCGTCAAGATATCCGTACGCCCGTCAGAATCGGTATTATTTCCGTTTTTGCTAATATGATCTTT AGTGTTATCTTCATTGGGATATTTTACTTCCTTGAGATTCCATTGCATGGCGGTCTGGCACTTGCGACGACTGGCGCATC ATTTGTGAATGCAGGCTTACTGTATTACTTCTTGCATAAGCGTGATATTTTCCGTTTTGGTAGTCACTGGAAAAAACTGT TTGCGCAGTTTGCAATCTCTACCAGTGCCATGATCGCCGTGCTTTATGTCATGCTACCGTACTTTCCAACCGATAAGGCA CAGTGGCAACGTTTGGTTGCGCTGCTGATTATGTGTGTGGTCGGTGCGCTGGTTTACGGCGGAGTATTATTAGCAACAGG CTTCCGTCCTCGCCAACTCAAACATGGTTAA
Upstream 100 bases:
>100_bases CATTTACCTAGGTTATGAAAGTGCTATAATCTGACAGTTTTTTTGACTCTCGTAAATCAGCAAGCAACCATCACTAAACA AATTGGCATAATAGGTTCTC
Downstream 100 bases:
>100_bases AAGGGTGTGATAAATTATTGGTTTACCAAACCAAAACAAGCTCAATATGAGAATTGACAGTGCATACTGCTGATAGTTGC CATAATGGCTTATTGTTAAA
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MAKSRLFRSTMVVSSMTMLSRILGLVRDIVLLGVFGAGGLMDAFLVAFKIPNFLRRLFAEGAFSQAFVPVLSEYKEKYSL REVQILVSRTSGALMLILSMLTVVVILMAPWVVTLFAPGFADQPDKFAITAELLRLTFPYLLFISMTAFASGILQSYGRF AAPAFAPVLLNLCMIGGALVFAPMFETPIMALGYAVAIAGLLQLLLQLPQLSQQKLLVMPKIDFQHEGVRRILKLMLPAI FGVSVTQINLLLNTIFASLMIGGSVSWLYAAERMSELPLGLIGVAIGTVILPSLSKSEAQKDDVSFKKTIDWAARLIILV GVPASAALFILSDVLMQALFLRGEFTLRDAQMSSLALKSMAGGILGFMLIKVFAPAFFARQDIRTPVRIGIISVFANMIF SVIFIGIFYFLEIPLHGGLALATTGASFVNAGLLYYFLHKRDIFRFGSHWKKLFAQFAISTSAMIAVLYVMLPYFPTDKA QWQRLVALLIMCVVGALVYGGVLLATGFRPRQLKHG
Sequences:
>Translated_516_residues MAKSRLFRSTMVVSSMTMLSRILGLVRDIVLLGVFGAGGLMDAFLVAFKIPNFLRRLFAEGAFSQAFVPVLSEYKEKYSL REVQILVSRTSGALMLILSMLTVVVILMAPWVVTLFAPGFADQPDKFAITAELLRLTFPYLLFISMTAFASGILQSYGRF AAPAFAPVLLNLCMIGGALVFAPMFETPIMALGYAVAIAGLLQLLLQLPQLSQQKLLVMPKIDFQHEGVRRILKLMLPAI FGVSVTQINLLLNTIFASLMIGGSVSWLYAAERMSELPLGLIGVAIGTVILPSLSKSEAQKDDVSFKKTIDWAARLIILV GVPASAALFILSDVLMQALFLRGEFTLRDAQMSSLALKSMAGGILGFMLIKVFAPAFFARQDIRTPVRIGIISVFANMIF SVIFIGIFYFLEIPLHGGLALATTGASFVNAGLLYYFLHKRDIFRFGSHWKKLFAQFAISTSAMIAVLYVMLPYFPTDKA QWQRLVALLIMCVVGALVYGGVLLATGFRPRQLKHG >Mature_515_residues AKSRLFRSTMVVSSMTMLSRILGLVRDIVLLGVFGAGGLMDAFLVAFKIPNFLRRLFAEGAFSQAFVPVLSEYKEKYSLR EVQILVSRTSGALMLILSMLTVVVILMAPWVVTLFAPGFADQPDKFAITAELLRLTFPYLLFISMTAFASGILQSYGRFA APAFAPVLLNLCMIGGALVFAPMFETPIMALGYAVAIAGLLQLLLQLPQLSQQKLLVMPKIDFQHEGVRRILKLMLPAIF GVSVTQINLLLNTIFASLMIGGSVSWLYAAERMSELPLGLIGVAIGTVILPSLSKSEAQKDDVSFKKTIDWAARLIILVG VPASAALFILSDVLMQALFLRGEFTLRDAQMSSLALKSMAGGILGFMLIKVFAPAFFARQDIRTPVRIGIISVFANMIFS VIFIGIFYFLEIPLHGGLALATTGASFVNAGLLYYFLHKRDIFRFGSHWKKLFAQFAISTSAMIAVLYVMLPYFPTDKAQ WQRLVALLIMCVVGALVYGGVLLATGFRPRQLKHG
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=512, Percent_Identity=46.09375, Blast_Score=439, Evalue=1e-124,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 56590; Mature: 56459
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSRLFRSTMVVSSMTMLSRILGLVRDIVLLGVFGAGGLMDAFLVAFKIPNFLRRLFAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC GAFSQAFVPVLSEYKEKYSLREVQILVSRTSGALMLILSMLTVVVILMAPWVVTLFAPGF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADQPDKFAITAELLRLTFPYLLFISMTAFASGILQSYGRFAAPAFAPVLLNLCMIGGALV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHH FAPMFETPIMALGYAVAIAGLLQLLLQLPQLSQQKLLVMPKIDFQHEGVRRILKLMLPAI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH FGVSVTQINLLLNTIFASLMIGGSVSWLYAAERMSELPLGLIGVAIGTVILPSLSKSEAQ HCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH KDDVSFKKTIDWAARLIILVGVPASAALFILSDVLMQALFLRGEFTLRDAQMSSLALKSM HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH AGGILGFMLIKVFAPAFFARQDIRTPVRIGIISVFANMIFSVIFIGIFYFLEIPLHGGLA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LATTGASFVNAGLLYYFLHKRDIFRFGSHWKKLFAQFAISTSAMIAVLYVMLPYFPTDKA EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QWQRLVALLIMCVVGALVYGGVLLATGFRPRQLKHG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AKSRLFRSTMVVSSMTMLSRILGLVRDIVLLGVFGAGGLMDAFLVAFKIPNFLRRLFAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC GAFSQAFVPVLSEYKEKYSLREVQILVSRTSGALMLILSMLTVVVILMAPWVVTLFAPGF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADQPDKFAITAELLRLTFPYLLFISMTAFASGILQSYGRFAAPAFAPVLLNLCMIGGALV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHH FAPMFETPIMALGYAVAIAGLLQLLLQLPQLSQQKLLVMPKIDFQHEGVRRILKLMLPAI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH FGVSVTQINLLLNTIFASLMIGGSVSWLYAAERMSELPLGLIGVAIGTVILPSLSKSEAQ HCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH KDDVSFKKTIDWAARLIILVGVPASAALFILSDVLMQALFLRGEFTLRDAQMSSLALKSM HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH AGGILGFMLIKVFAPAFFARQDIRTPVRIGIISVFANMIFSVIFIGIFYFLEIPLHGGLA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LATTGASFVNAGLLYYFLHKRDIFRFGSHWKKLFAQFAISTSAMIAVLYVMLPYFPTDKA EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH QWQRLVALLIMCVVGALVYGGVLLATGFRPRQLKHG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]