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The map label for this gene is efp [H]

Identifier: 93006774

GI number: 93006774

Start: 2406425

End: 2406997

Strand: Direct

Name: efp [H]

Synonym: Pcryo_1950

Alternate gene names: 93006774

Gene position: 2406425-2406997 (Clockwise)

Preceding gene: 93006765

Following gene: 93006784

Centisome position: 78.64

GC content: 43.98

Gene sequence:

>573_bases
GTGGCAAGTTTTTCTACCAATGAATTTAAATCTGGTCTCAAAGTCATGCTCGATGGCAACCCTTGTGCCATTCTTGAAAA
CGAGTTTGTCAAACCAGGTAAAGGACAGGCCTTTAACCGTGTTAAATTGCGCAATCTTCGTAGTGGTAAAGTATTGGAAC
AAACCTTTAAGTCAGGCGATAGCTTAGAAGCTGCTGATGTCATGGACACTGAAATGAACTATCTCTATAACGATGGTGAA
TTTTGGCATTTCATGCATCCTGAGAGTTTTGAGCAGATTCAAGCGGACAAAACAGCGATGAGCGATTCAATAAAGTGGTT
AAAAGAAAACAGCAATGCACTATGTACCATCACTTTATTCAACGGTGCTCCTCTTTCAGTAACACCGCCAAACTTCGTTG
AATTGCAAATCACTGAAACCGATCCGGGTGTACGTGGTGATACCTCAGGCGGCGGCGGCAAGCCTGCAACGTTAGAGACT
GGCGCTGTGGTACGTGTACCATTATTTGTGCAGCAAGGTGAAGTAGTACGTGTAGATACTCGTACTGGCGATTATCAAAC
GCGCGTTAGCTAA

Upstream 100 bases:

>100_bases
GCTCATATCTTTTAGCACGGTAAATCTGGTACTCCATTTTCACTAAAAATATTTACCATCCTTTTTTTCAACCCTTTTTC
TAAACCCTTAGGAGTCTTCC

Downstream 100 bases:

>100_bases
AGCTATTAATAGATAGCTCTAGTCTGTCTGTAAGAACAAAAAAGCTTAACCGCTCAGAGAGAGAGGTTAAGCTTTTTTAA
TGGCTAGCAAATAAGTCATG

Product: elongation factor P

Products: NA

Alternate protein names: EF-P [H]

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MASFSTNEFKSGLKVMLDGNPCAILENEFVKPGKGQAFNRVKLRNLRSGKVLEQTFKSGDSLEAADVMDTEMNYLYNDGE
FWHFMHPESFEQIQADKTAMSDSIKWLKENSNALCTITLFNGAPLSVTPPNFVELQITETDPGVRGDTSGGGGKPATLET
GAVVRVPLFVQQGEVVRVDTRTGDYQTRVS

Sequences:

>Translated_190_residues
MASFSTNEFKSGLKVMLDGNPCAILENEFVKPGKGQAFNRVKLRNLRSGKVLEQTFKSGDSLEAADVMDTEMNYLYNDGE
FWHFMHPESFEQIQADKTAMSDSIKWLKENSNALCTITLFNGAPLSVTPPNFVELQITETDPGVRGDTSGGGGKPATLET
GAVVRVPLFVQQGEVVRVDTRTGDYQTRVS
>Mature_189_residues
ASFSTNEFKSGLKVMLDGNPCAILENEFVKPGKGQAFNRVKLRNLRSGKVLEQTFKSGDSLEAADVMDTEMNYLYNDGEF
WHFMHPESFEQIQADKTAMSDSIKWLKENSNALCTITLFNGAPLSVTPPNFVELQITETDPGVRGDTSGGGGKPATLETG
AVVRVPLFVQQGEVVRVDTRTGDYQTRVS

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI1790590, Length=189, Percent_Identity=64.021164021164, Blast_Score=263, Evalue=6e-72,
Organism=Escherichia coli, GI87082061, Length=184, Percent_Identity=26.0869565217391, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 20904; Mature: 20773

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFSTNEFKSGLKVMLDGNPCAILENEFVKPGKGQAFNRVKLRNLRSGKVLEQTFKSGD
CCCCCCHHHCCCEEEEECCCCEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCC
SLEAADVMDTEMNYLYNDGEFWHFMHPESFEQIQADKTAMSDSIKWLKENSNALCTITLF
CCCHHHHCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
NGAPLSVTPPNFVELQITETDPGVRGDTSGGGGKPATLETGAVVRVPLFVQQGEVVRVDT
CCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCEEEEEC
RTGDYQTRVS
CCCCEEEECC
>Mature Secondary Structure 
ASFSTNEFKSGLKVMLDGNPCAILENEFVKPGKGQAFNRVKLRNLRSGKVLEQTFKSGD
CCCCCHHHCCCEEEEECCCCEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCC
SLEAADVMDTEMNYLYNDGEFWHFMHPESFEQIQADKTAMSDSIKWLKENSNALCTITLF
CCCHHHHCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
NGAPLSVTPPNFVELQITETDPGVRGDTSGGGGKPATLETGAVVRVPLFVQQGEVVRVDT
CCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCEEEEEC
RTGDYQTRVS
CCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA