Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is allA [H]
Identifier: 93006744
GI number: 93006744
Start: 2371556
End: 2372098
Strand: Direct
Name: allA [H]
Synonym: Pcryo_1920
Alternate gene names: 93006744
Gene position: 2371556-2372098 (Clockwise)
Preceding gene: 93006743
Following gene: 93006745
Centisome position: 77.5
GC content: 41.99
Gene sequence:
>543_bases ATGAAAACTACAATCATTGCTAAACCTTTAACTAAAGCTGCTTTTGCTCCTTACGGCTCAGTAATCGAGCCTTATGATGA TCAAGAAAAGTGTCCTGAAAACAGCTGGGATATCAATCGTGGCTTTGCCTGTCGTCATAATGCCATCTCAAAAGTCACTC ATGATGGCGGAGAAGTCGGTTTTAGTATTTTCCGTACTAAAAGACGTGACTGCCCTATTACGTTATCGGTGATGGAATAC CATCCATTTGGCACGCAAGCGTTCTTTTCTATGAATGGCACAGACTATATAGTCGTTGTGGCAAAAGCTGGCGATGCGCC TAAATCAGCTGATGATTTAGAAGTGTTTTATGCTCATTCGCATCAAGGTGTACAGTATGATGCCAATGTTTGGCATCATC CGCTACTGGCGCTAAAAGCGGATTGTGACTTTTTAGTGATTGATCGTATCAACGGCGAAGGTAACAATTGCCATGAATTC GAGATTGATGATTGGGAAGTTTGCATTGATATATCTGCTGAGCAGGCTAAAAATCAGGCCTAA
Upstream 100 bases:
>100_bases ACATCTTATGTCCGGTATTTTCTTATCTCAAATAGATCTATCACTTAATAAGTTGCTAGAACAAATAAATAATATTGTTA ATTAATCTAAAGGTGAACTT
Downstream 100 bases:
>100_bases TGGCTATCGTCAACTGACGAAGAATTATGCTAATGTCAGAGCATTAATCATATAAAAAATCAAAGGTTCAGACACAAATT TATCGCGGCACCAAACCCCT
Product: ureidoglycolate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKTTIIAKPLTKAAFAPYGSVIEPYDDQEKCPENSWDINRGFACRHNAISKVTHDGGEVGFSIFRTKRRDCPITLSVMEY HPFGTQAFFSMNGTDYIVVVAKAGDAPKSADDLEVFYAHSHQGVQYDANVWHHPLLALKADCDFLVIDRINGEGNNCHEF EIDDWEVCIDISAEQAKNQA
Sequences:
>Translated_180_residues MKTTIIAKPLTKAAFAPYGSVIEPYDDQEKCPENSWDINRGFACRHNAISKVTHDGGEVGFSIFRTKRRDCPITLSVMEY HPFGTQAFFSMNGTDYIVVVAKAGDAPKSADDLEVFYAHSHQGVQYDANVWHHPLLALKADCDFLVIDRINGEGNNCHEF EIDDWEVCIDISAEQAKNQA >Mature_180_residues MKTTIIAKPLTKAAFAPYGSVIEPYDDQEKCPENSWDINRGFACRHNAISKVTHDGGEVGFSIFRTKRRDCPITLSVMEY HPFGTQAFFSMNGTDYIVVVAKAGDAPKSADDLEVFYAHSHQGVQYDANVWHHPLLALKADCDFLVIDRINGEGNNCHEF EIDDWEVCIDISAEQAKNQA
Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]
COG id: COG3194
COG function: function code F; Ureidoglycolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureidoglycolate hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786714, Length=169, Percent_Identity=37.8698224852071, Blast_Score=101, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6322223, Length=193, Percent_Identity=26.9430051813472, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR007247 [H]
Pfam domain/function: PF04115 Ureidogly_hydro [H]
EC number: =3.5.3.19 [H]
Molecular weight: Translated: 20143; Mature: 20143
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTIIAKPLTKAAFAPYGSVIEPYDDQEKCPENSWDINRGFACRHNAISKVTHDGGEVG CCCEEEECCCHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCHHHHHCCCCCHHC FSIFRTKRRDCPITLSVMEYHPFGTQAFFSMNGTDYIVVVAKAGDAPKSADDLEVFYAHS CEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEEC HQGVQYDANVWHHPLLALKADCDFLVIDRINGEGNNCHEFEIDDWEVCIDISAEQAKNQA CCCEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEECCCEEEEEEECHHHCCCCC >Mature Secondary Structure MKTTIIAKPLTKAAFAPYGSVIEPYDDQEKCPENSWDINRGFACRHNAISKVTHDGGEVG CCCEEEECCCHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCHHHHHCCCCCHHC FSIFRTKRRDCPITLSVMEYHPFGTQAFFSMNGTDYIVVVAKAGDAPKSADDLEVFYAHS CEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEEC HQGVQYDANVWHHPLLALKADCDFLVIDRINGEGNNCHEFEIDDWEVCIDISAEQAKNQA CCCEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEECCCEEEEEEECHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA