Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is lplT [H]
Identifier: 93006514
GI number: 93006514
Start: 2086683
End: 2088023
Strand: Direct
Name: lplT [H]
Synonym: Pcryo_1690
Alternate gene names: 93006514
Gene position: 2086683-2088023 (Clockwise)
Preceding gene: 93006511
Following gene: 93006515
Centisome position: 68.2
GC content: 41.09
Gene sequence:
>1341_bases ATGGCCAATCAGTTTCAGTTATTTAAGCGTCGCCGTTTTAGCGCCATGTTTTTTACCCAATTTTTGGGAGCGCTTAATGA CAATATTTTTAAGCAAGCGCTGATATTAGTTCTGACCTACACGGCGGCGAGCCAGCTTGGCGTTGAGGTTAGTATTTTAA ATAACTTGGCAGCCATGTTATTTATTTTGCCGTATTTTCTATTTTCAGCGCTGGCAGGGCAAATCGCTGACAAGTTTGAA AAGTCTAAATTGACCCGCTTAACTAAGCTGCTTGAGCTATCCATTATGGTGATTGCGGCAGTGGGCTTTGTATTTGAGTG GTATGCACTCTTATTTGTCTCGTTATTTTTGATGGGCACACAATCTACCTTTTTTGGGCCTATCAAATATGCCTACTTGC CACAAGCGATGCAAGAAAATGAATTGGTCGGTGCCAATGGTCTGTTTCAAATGGGTACGTCATTAGCGATATTACTTGGT ATGATTATCGCTGGCGTCTTAACCCAAGTGCCACAGCCGCTCTATTGGATTAGTCTAACTGTATTAGTCGTTGCGATATT AGGTTATTTCGCCGCCCGATCTATACCCACCATGCCAGCGATGCAGCCTGATTTAAAGATTAATTGGAATATCTTTACCA CCAGTGTGTCAACGGTACGTTATTTATATTCCTTACGGTTTTTGTTCTTCGTTATCTTGGGCAACAGCTGGTTTTGGTTT TATGGCGCGACTTTTTTGACCCAAACACCTGAATTCAGCAAAGTCATTCTTCATGGCGATGAATCAGTGGTAATTTTCCT GCTGACTTTATTTTCAGTTGGGGTCTCTATCGGCTCATTATTATGCAAAAGGCTTACCAAGAATCAGGTCAGCTTACGTT TATTACCCTTTGGTATCGCTGGTTTGAGTATCTTTGCTATCGACTTGTATTTTTCGCTATCAGGATTGTCGATTGATGTG AGTAGCGAGACCTTAATCGGAGTGAGCGGATTATTTGCTATTTCTGGTAGCTGGCGTGTGTTTGTCGATTTATTCTTTTT GGGCTTTAGTGGCGGCTTATATATCGTCCCGTTATATGCGTCTATGCAGGCGTATGCACCCAAAAGCCATCGTGCACGCA TCGTTGGTGCCAATAACATATTTAATGCCATATTTATGGTTGGCTCAGCGATTTTTTCTATCGTGGTATTAAATAGCTTA GGTATGTCACTACCGCAGTTATTCCTTGTTACAGGCTTGCTTAATATTGCCTTTGGGGTATTTTTATATACCAAGCTAAA TAAACATATCAAACATGCCAGCATACAAACTCATGATGATCAGCTAAACAGACATGATTAA
Upstream 100 bases:
>100_bases GTTAAGTTTTTGATAGCGTTGATAATTACCCTAGTATTAATGACTATCTTCTCCGTCTTGCTTCACTTTTATTTGTCTTG ACCCATTTGTAGGAATTTTC
Downstream 100 bases:
>100_bases AGGGTTTGATAATTTGAATCAACAGCATTAATGACAGCTGCCGTTATAAATCGATTGCTGAACGCCTCATTATTATGATG CTGACCATTGATGTTGTTTG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MANQFQLFKRRRFSAMFFTQFLGALNDNIFKQALILVLTYTAASQLGVEVSILNNLAAMLFILPYFLFSALAGQIADKFE KSKLTRLTKLLELSIMVIAAVGFVFEWYALLFVSLFLMGTQSTFFGPIKYAYLPQAMQENELVGANGLFQMGTSLAILLG MIIAGVLTQVPQPLYWISLTVLVVAILGYFAARSIPTMPAMQPDLKINWNIFTTSVSTVRYLYSLRFLFFVILGNSWFWF YGATFLTQTPEFSKVILHGDESVVIFLLTLFSVGVSIGSLLCKRLTKNQVSLRLLPFGIAGLSIFAIDLYFSLSGLSIDV SSETLIGVSGLFAISGSWRVFVDLFFLGFSGGLYIVPLYASMQAYAPKSHRARIVGANNIFNAIFMVGSAIFSIVVLNSL GMSLPQLFLVTGLLNIAFGVFLYTKLNKHIKHASIQTHDDQLNRHD
Sequences:
>Translated_446_residues MANQFQLFKRRRFSAMFFTQFLGALNDNIFKQALILVLTYTAASQLGVEVSILNNLAAMLFILPYFLFSALAGQIADKFE KSKLTRLTKLLELSIMVIAAVGFVFEWYALLFVSLFLMGTQSTFFGPIKYAYLPQAMQENELVGANGLFQMGTSLAILLG MIIAGVLTQVPQPLYWISLTVLVVAILGYFAARSIPTMPAMQPDLKINWNIFTTSVSTVRYLYSLRFLFFVILGNSWFWF YGATFLTQTPEFSKVILHGDESVVIFLLTLFSVGVSIGSLLCKRLTKNQVSLRLLPFGIAGLSIFAIDLYFSLSGLSIDV SSETLIGVSGLFAISGSWRVFVDLFFLGFSGGLYIVPLYASMQAYAPKSHRARIVGANNIFNAIFMVGSAIFSIVVLNSL GMSLPQLFLVTGLLNIAFGVFLYTKLNKHIKHASIQTHDDQLNRHD >Mature_445_residues ANQFQLFKRRRFSAMFFTQFLGALNDNIFKQALILVLTYTAASQLGVEVSILNNLAAMLFILPYFLFSALAGQIADKFEK SKLTRLTKLLELSIMVIAAVGFVFEWYALLFVSLFLMGTQSTFFGPIKYAYLPQAMQENELVGANGLFQMGTSLAILLGM IIAGVLTQVPQPLYWISLTVLVVAILGYFAARSIPTMPAMQPDLKINWNIFTTSVSTVRYLYSLRFLFFVILGNSWFWFY GATFLTQTPEFSKVILHGDESVVIFLLTLFSVGVSIGSLLCKRLTKNQVSLRLLPFGIAGLSIFAIDLYFSLSGLSIDVS SETLIGVSGLFAISGSWRVFVDLFFLGFSGGLYIVPLYASMQAYAPKSHRARIVGANNIFNAIFMVGSAIFSIVVLNSLG MSLPQLFLVTGLLNIAFGVFLYTKLNKHIKHASIQTHDDQLNRHD
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=380, Percent_Identity=27.8947368421053, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49562; Mature: 49431
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANQFQLFKRRRFSAMFFTQFLGALNDNIFKQALILVLTYTAASQLGVEVSILNNLAAML CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FILPYFLFSALAGQIADKFEKSKLTRLTKLLELSIMVIAAVGFVFEWYALLFVSLFLMGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QSTFFGPIKYAYLPQAMQENELVGANGLFQMGTSLAILLGMIIAGVLTQVPQPLYWISLT CCHHCCCHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VLVVAILGYFAARSIPTMPAMQPDLKINWNIFTTSVSTVRYLYSLRFLFFVILGNSWFWF HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEE YGATFLTQTPEFSKVILHGDESVVIFLLTLFSVGVSIGSLLCKRLTKNQVSLRLLPFGIA HHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHH GLSIFAIDLYFSLSGLSIDVSSETLIGVSGLFAISGSWRVFVDLFFLGFSGGLYIVPLYA HHHHHHHHHHHEECCCEEEECCCCEEEEEEHEEECCCHHHHHHHHHHHCCCCEEEEEEHH SMQAYAPKSHRARIVGANNIFNAIFMVGSAIFSIVVLNSLGMSLPQLFLVTGLLNIAFGV HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FLYTKLNKHIKHASIQTHDDQLNRHD HHHHHHHHHHHHCCCCCCCHHCCCCC >Mature Secondary Structure ANQFQLFKRRRFSAMFFTQFLGALNDNIFKQALILVLTYTAASQLGVEVSILNNLAAML CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FILPYFLFSALAGQIADKFEKSKLTRLTKLLELSIMVIAAVGFVFEWYALLFVSLFLMGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QSTFFGPIKYAYLPQAMQENELVGANGLFQMGTSLAILLGMIIAGVLTQVPQPLYWISLT CCHHCCCHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VLVVAILGYFAARSIPTMPAMQPDLKINWNIFTTSVSTVRYLYSLRFLFFVILGNSWFWF HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEE YGATFLTQTPEFSKVILHGDESVVIFLLTLFSVGVSIGSLLCKRLTKNQVSLRLLPFGIA HHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHH GLSIFAIDLYFSLSGLSIDVSSETLIGVSGLFAISGSWRVFVDLFFLGFSGGLYIVPLYA HHHHHHHHHHHEECCCEEEECCCCEEEEEEHEEECCCHHHHHHHHHHHCCCCEEEEEEHH SMQAYAPKSHRARIVGANNIFNAIFMVGSAIFSIVVLNSLGMSLPQLFLVTGLLNIAFGV HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FLYTKLNKHIKHASIQTHDDQLNRHD HHHHHHHHHHHHCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA