Click here to switch to the map view.

The map label for this gene is fdx [H]

Identifier: 93006485

GI number: 93006485

Start: 2045373

End: 2045711

Strand: Direct

Name: fdx [H]

Synonym: Pcryo_1661

Alternate gene names: 93006485

Gene position: 2045373-2045711 (Clockwise)

Preceding gene: 93006484

Following gene: 93006491

Centisome position: 66.84

GC content: 40.71

Gene sequence:

>339_bases
ATGCCAAAAATCACTGTACTACCCCATCATGAAATTTGCCCCAAAGGCATCGAAGTTGAATTAGCAGCAGGCGAAAACTT
ATGTAAAGCCTTACTCGAAAAAGGCATCAAGATTGAACATGCTTGCGAGATGTCAAAAGCTTGTACGACTTGCCATGTCG
TAGTGCGTAAAGGTTTTAATAGCTTAGATGAGATGGATGATATCGAAGCTGACTTACTCGACCGTGCTTGGGGGCTGGAA
CCTGATTCACGCTTGTCTTGTCAGGTGATGCTTGAAGATGACGATTTAACCATCGAAATTCCTAAATATACTTTAAATCA
TGCTAAAGAAAATCACTAA

Upstream 100 bases:

>100_bases
TAAAAGAAATGCTTTACTATATTACTGACGTGTCGAATTAAGCATATTTTTATACTTTTAGATGTTATTTTAAATGGATT
AGCACCGGATAGACTACCTT

Downstream 100 bases:

>100_bases
TTATTAATGACTTTATACTCATTAAAAAGCCAACTATGTCTTATAGCTGGCTTTTTCCTATTCCAATATCTGATACTTTA
AATAATCACAATCTATTCAT

Product: ferredoxin, 2Fe-2S type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MPKITVLPHHEICPKGIEVELAAGENLCKALLEKGIKIEHACEMSKACTTCHVVVRKGFNSLDEMDDIEADLLDRAWGLE
PDSRLSCQVMLEDDDLTIEIPKYTLNHAKENH

Sequences:

>Translated_112_residues
MPKITVLPHHEICPKGIEVELAAGENLCKALLEKGIKIEHACEMSKACTTCHVVVRKGFNSLDEMDDIEADLLDRAWGLE
PDSRLSCQVMLEDDDLTIEIPKYTLNHAKENH
>Mature_111_residues
PKITVLPHHEICPKGIEVELAAGENLCKALLEKGIKIEHACEMSKACTTCHVVVRKGFNSLDEMDDIEADLLDRAWGLEP
DSRLSCQVMLEDDDLTIEIPKYTLNHAKENH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. Although the function of this ferredoxin is unknown it is probable that it has a role as a cellular electron transfer protein. Involved in the in vivo as

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788874, Length=111, Percent_Identity=58.5585585585586, Blast_Score=145, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17544202, Length=92, Percent_Identity=41.304347826087, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24661503, Length=101, Percent_Identity=39.6039603960396, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12567; Mature: 12435

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKITVLPHHEICPKGIEVELAAGENLCKALLEKGIKIEHACEMSKACTTCHVVVRKGFN
CCCEECCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
SLDEMDDIEADLLDRAWGLEPDSRLSCQVMLEDDDLTIEIPKYTLNHAKENH
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
PKITVLPHHEICPKGIEVELAAGENLCKALLEKGIKIEHACEMSKACTTCHVVVRKGFN
CCEECCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
SLDEMDDIEADLLDRAWGLEPDSRLSCQVMLEDDDLTIEIPKYTLNHAKENH
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]