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The map label for this gene is vdlD [H]

Identifier: 93005562

GI number: 93005562

Start: 861767

End: 862303

Strand: Direct

Name: vdlD [H]

Synonym: Pcryo_0732

Alternate gene names: 93005562

Gene position: 861767-862303 (Clockwise)

Preceding gene: 93005561

Following gene: 93005563

Centisome position: 28.16

GC content: 47.11

Gene sequence:

>537_bases
ATGACGCAATATAACACCAGCTCTACCGCCAAAACAGTCCCATTAAACCATGAGCTGTATATGTCAGTGCTTATGACGCC
AGATATGGCCAATTTTATTGGTAATGTCCATGGTGGGGATTTGCTCAAGATGCTGGACCAAGTCGCTTATGCCTGTGCCA
GTCGCTATAGCGGTAGTTATGTGGTGACACTGTCAGTTGATCAGGTGATGTTCCGTGAGCCTATTCATGTTGGAGAGTTG
GTAACGTTTGCGGCTAGTGTCAATTACGTTGGTAAGACTTCAATGGAGGTCGGCATTCGAGTAGAGGCAGAAGATGTGCG
CGCACGTACCGTTCGCCATACCAACAGCTGCTACTTTACCATGGTGGCGATTGATGAAAATCGTAAGCCAACGCTAATCC
CTGAGCTTGAGATTAAAGATGCCTTGCAACAGTGCCGATTTGACGCAGGCTTAGAGCGCAGAAAGCTGCGTATGGAAGGC
TCGCAACGTATCAGCTGTGACATCAGTAAATTGACTAATAAAGTAGCAAGCGCATAA

Upstream 100 bases:

>100_bases
CTAATCTAGTAGTTAAGTTAAATCGACTATATTTGCGCTGTCGGAATTGCTATTGTATAAATAGCACTTTAAATAGATTC
TACCCCCGTTAAGGAACATT

Downstream 100 bases:

>100_bases
TCTGCTCATTAATGCAGACAATAAACATACTCTCACCAAAACATTACTGATAAGAACAGGTTTTTTGACTACAGTAAATG
GAATCTAAAGTAACTAATAG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTQYNTSSTAKTVPLNHELYMSVLMTPDMANFIGNVHGGDLLKMLDQVAYACASRYSGSYVVTLSVDQVMFREPIHVGEL
VTFAASVNYVGKTSMEVGIRVEAEDVRARTVRHTNSCYFTMVAIDENRKPTLIPELEIKDALQQCRFDAGLERRKLRMEG
SQRISCDISKLTNKVASA

Sequences:

>Translated_178_residues
MTQYNTSSTAKTVPLNHELYMSVLMTPDMANFIGNVHGGDLLKMLDQVAYACASRYSGSYVVTLSVDQVMFREPIHVGEL
VTFAASVNYVGKTSMEVGIRVEAEDVRARTVRHTNSCYFTMVAIDENRKPTLIPELEIKDALQQCRFDAGLERRKLRMEG
SQRISCDISKLTNKVASA
>Mature_177_residues
TQYNTSSTAKTVPLNHELYMSVLMTPDMANFIGNVHGGDLLKMLDQVAYACASRYSGSYVVTLSVDQVMFREPIHVGELV
TFAASVNYVGKTSMEVGIRVEAEDVRARTVRHTNSCYFTMVAIDENRKPTLIPELEIKDALQQCRFDAGLERRKLRMEGS
QRISCDISKLTNKVASA

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI22165355, Length=159, Percent_Identity=32.7044025157233, Blast_Score=85, Evalue=3e-17,
Organism=Homo sapiens, GI22165400, Length=144, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=4e-17,
Organism=Homo sapiens, GI18640736, Length=140, Percent_Identity=32.8571428571429, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI32528286, Length=142, Percent_Identity=28.169014084507, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI75709208, Length=142, Percent_Identity=28.169014084507, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI32528284, Length=142, Percent_Identity=28.169014084507, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI32528282, Length=142, Percent_Identity=28.169014084507, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 19877; Mature: 19746

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQYNTSSTAKTVPLNHELYMSVLMTPDMANFIGNVHGGDLLKMLDQVAYACASRYSGSY
CCCCCCCCCCEECCCCHHHEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCE
VVTLSVDQVMFREPIHVGELVTFAASVNYVGKTSMEVGIRVEAEDVRARTVRHTNSCYFT
EEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHEECCCEEEE
MVAIDENRKPTLIPELEIKDALQQCRFDAGLERRKLRMEGSQRISCDISKLTNKVASA
EEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEHHHHHHHHHCC
>Mature Secondary Structure 
TQYNTSSTAKTVPLNHELYMSVLMTPDMANFIGNVHGGDLLKMLDQVAYACASRYSGSY
CCCCCCCCCEECCCCHHHEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCE
VVTLSVDQVMFREPIHVGELVTFAASVNYVGKTSMEVGIRVEAEDVRARTVRHTNSCYFT
EEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHEECCCEEEE
MVAIDENRKPTLIPELEIKDALQQCRFDAGLERRKLRMEGSQRISCDISKLTNKVASA
EEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]