Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005500
Identifier: 93005500
GI number: 93005500
Start: 793649
End: 794536
Strand: Direct
Name: 93005500
Synonym: Pcryo_0670
Alternate gene names: NA
Gene position: 793649-794536 (Clockwise)
Preceding gene: 93005499
Following gene: 93005502
Centisome position: 25.94
GC content: 41.22
Gene sequence:
>888_bases ATGACACTATCTTTTAAATCCGCCCTATTGCCAAGTATGCTAGCGATAAGTCTGGCATTAAGTGCTTGCCAAGATGCGTC TGTTCCAACGGATGCAAATCTCGAGTCAGCTGATACCAATGTTAGCACTGCAGATGCTGATATAGCGAATAATAATGCCA CGTTAGCTAAGGCAAGCGAGATGAGTGCTGAAGAACAAATGATTGAAAATCTTGCACGTTATCGTTGGACACTAATCGAT ATTGATGATAAAAGTGGTGGACCTGTCATAACGACGCTTGTAGATATTAAAAACCAAGTAATGCTGTCGTTTAAACAAAA CCAAGGTCATAACACACTAAATTATGGTGTAGGCTGTAACACTATGAGTGCAGGTTATGAGTTGCAAGGTCATACGTTAA CGACAGAAGACAGCATGAGTACCAAAATGCTATGCGAAAATCTAAATAAGGCAGAAAATCGTTTAGATACTTTGATGCAG GGTACTAGTGAGCTCAGTGTCACTGAAGGTGATAACCCAGTCCTAACGCAAGTGACCAGCAATGCGGTTACTTTGACTTG GAAAGGTAGGTTGACGTCACAAGCCAAGTACAATAGTAAAGGTGAGACGGTATTTTGGGCCGTAAATGCCAATGAAACAG TGTGCTCTGATAATAGCTTAGAGATGTGTTTGCAAGTAAAACCAGTCACCTATAATGATCAAGGTATTAAAGTCAGTGAA GGCAAGTGGGCTGCATTTAATGGTGAGATTGATGGCTATGAGCATGATGGTAAGCATGATGAAGTGCTACGCCTACAACG TTATCAATTAGACAGCGATAAGGTATCAGAAGGTGAAGAATATGCCTATGTCTTGGACGCCGTTATTGAAAGCTCAGTCG TAGAATAG
Upstream 100 bases:
>100_bases ATTTGACTGATATCCGTCTTATAATTGTGACAGTCAGATTTTGTAGATTAAATGGGTCAAAAAGTTGAATTAAAAAGTAT AACTGCAAGGTATGATCTTC
Downstream 100 bases:
>100_bases GGCTGATTGGTTATTAACGAATGAATACATTAAATAGTAACCTTAAACGAGCATAAAAAAACACGCGCCATTTGACCGCG TGTTTTTTTATGCTTAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTLSFKSALLPSMLAISLALSACQDASVPTDANLESADTNVSTADADIANNNATLAKASEMSAEEQMIENLARYRWTLID IDDKSGGPVITTLVDIKNQVMLSFKQNQGHNTLNYGVGCNTMSAGYELQGHTLTTEDSMSTKMLCENLNKAENRLDTLMQ GTSELSVTEGDNPVLTQVTSNAVTLTWKGRLTSQAKYNSKGETVFWAVNANETVCSDNSLEMCLQVKPVTYNDQGIKVSE GKWAAFNGEIDGYEHDGKHDEVLRLQRYQLDSDKVSEGEEYAYVLDAVIESSVVE
Sequences:
>Translated_295_residues MTLSFKSALLPSMLAISLALSACQDASVPTDANLESADTNVSTADADIANNNATLAKASEMSAEEQMIENLARYRWTLID IDDKSGGPVITTLVDIKNQVMLSFKQNQGHNTLNYGVGCNTMSAGYELQGHTLTTEDSMSTKMLCENLNKAENRLDTLMQ GTSELSVTEGDNPVLTQVTSNAVTLTWKGRLTSQAKYNSKGETVFWAVNANETVCSDNSLEMCLQVKPVTYNDQGIKVSE GKWAAFNGEIDGYEHDGKHDEVLRLQRYQLDSDKVSEGEEYAYVLDAVIESSVVE >Mature_294_residues TLSFKSALLPSMLAISLALSACQDASVPTDANLESADTNVSTADADIANNNATLAKASEMSAEEQMIENLARYRWTLIDI DDKSGGPVITTLVDIKNQVMLSFKQNQGHNTLNYGVGCNTMSAGYELQGHTLTTEDSMSTKMLCENLNKAENRLDTLMQG TSELSVTEGDNPVLTQVTSNAVTLTWKGRLTSQAKYNSKGETVFWAVNANETVCSDNSLEMCLQVKPVTYNDQGIKVSEG KWAAFNGEIDGYEHDGKHDEVLRLQRYQLDSDKVSEGEEYAYVLDAVIESSVVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32209; Mature: 32078
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSFKSALLPSMLAISLALSACQDASVPTDANLESADTNVSTADADIANNNATLAKASE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHH MSAEEQMIENLARYRWTLIDIDDKSGGPVITTLVDIKNQVMLSFKQNQGHNTLNYGVGCN CCHHHHHHHHHHHCEEEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCEEEECCCCC TMSAGYELQGHTLTTEDSMSTKMLCENLNKAENRLDTLMQGTSELSVTEGDNPVLTQVTS CCCCCEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEC NAVTLTWKGRLTSQAKYNSKGETVFWAVNANETVCSDNSLEMCLQVKPVTYNDQGIKVSE CEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCCCEEEEEEEECCEECCCCEEEEC GKWAAFNGEIDGYEHDGKHDEVLRLQRYQLDSDKVSEGEEYAYVLDAVIESSVVE CCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TLSFKSALLPSMLAISLALSACQDASVPTDANLESADTNVSTADADIANNNATLAKASE CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHH MSAEEQMIENLARYRWTLIDIDDKSGGPVITTLVDIKNQVMLSFKQNQGHNTLNYGVGCN CCHHHHHHHHHHHCEEEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCEEEECCCCC TMSAGYELQGHTLTTEDSMSTKMLCENLNKAENRLDTLMQGTSELSVTEGDNPVLTQVTS CCCCCEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEC NAVTLTWKGRLTSQAKYNSKGETVFWAVNANETVCSDNSLEMCLQVKPVTYNDQGIKVSE CEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCCCEEEEEEEECCEECCCCEEEEC GKWAAFNGEIDGYEHDGKHDEVLRLQRYQLDSDKVSEGEEYAYVLDAVIESSVVE CCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA