Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is epsL [H]
Identifier: 93005466
GI number: 93005466
Start: 753490
End: 754113
Strand: Direct
Name: epsL [H]
Synonym: Pcryo_0636
Alternate gene names: 93005466
Gene position: 753490-754113 (Clockwise)
Preceding gene: 93005465
Following gene: 93005467
Centisome position: 24.62
GC content: 42.15
Gene sequence:
>624_bases ATGATAAAACGCCTTTTCGATATCACCGCCGCTACTACTGCTTTAGTTGTTTTATCTCCGGTATATGCTATCACCGCTTA TAAAGTTAAACAAAATTTAGGCTCGCCAGTATTGTTTCGGCAGACGCGTCCGGGTTTAGACGGTAAGCCGTTTGAGATGA TTAAGTTCCGCACCATGAAAGACGCCACAGATAGCGAAGGCAATCCACTGCCTGATAGTGAGCGCTTGACTGATTTTGGT AAAGCACTACGCAATAGTAGTCTCGATGAATTGCCTGAGCTTTGGAATGTCGTTAAAGGTGATATGAGCTTAGTCGGACC ACGGCCATTATTGATGGAATACCTGCCGCTATACAGTAAAGAACAAGCACGTCGTCATAATGTACGCCCTGGTATTACCG GCTACGCGCAAGTGAATGGTCGTAATGCCATCGGTTGGGATAAGAAGTTTGAGCTCGATACGTGGTATATAGATAACCAA TCATTATGGTTAGATATTAAAATATTGCTTAAGACAGTAAAAAAAGTAGTCATTAAAGATGGTATTAGTGCTGACGGTGA AGCGACTATGAGTAAGTTCACTGGTTCTCAAAATCAGTCAGCTTTAGAAAGTAGCTATGAGTAA
Upstream 100 bases:
>100_bases ACAGATTAAAAAGATGGGCTATGAGAGTTATAAAATAGCGCAAGAGAAATTCGATGCAGATAAAGTAAATAAACGATTGA TAGCTATGTTGGGTTTATAA
Downstream 100 bases:
>100_bases AGTATTTGCCGTCTATGGTGCCTCAGGCTGTGGTCGTAGTTTAATGCCAGTAGCCAATGAGCAATTGCGTATATTAGAAG GTGATACAGATAGCCAAATC
Product: undecaprenyl-phosphate galactosephosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MIKRLFDITAATTALVVLSPVYAITAYKVKQNLGSPVLFRQTRPGLDGKPFEMIKFRTMKDATDSEGNPLPDSERLTDFG KALRNSSLDELPELWNVVKGDMSLVGPRPLLMEYLPLYSKEQARRHNVRPGITGYAQVNGRNAIGWDKKFELDTWYIDNQ SLWLDIKILLKTVKKVVIKDGISADGEATMSKFTGSQNQSALESSYE
Sequences:
>Translated_207_residues MIKRLFDITAATTALVVLSPVYAITAYKVKQNLGSPVLFRQTRPGLDGKPFEMIKFRTMKDATDSEGNPLPDSERLTDFG KALRNSSLDELPELWNVVKGDMSLVGPRPLLMEYLPLYSKEQARRHNVRPGITGYAQVNGRNAIGWDKKFELDTWYIDNQ SLWLDIKILLKTVKKVVIKDGISADGEATMSKFTGSQNQSALESSYE >Mature_207_residues MIKRLFDITAATTALVVLSPVYAITAYKVKQNLGSPVLFRQTRPGLDGKPFEMIKFRTMKDATDSEGNPLPDSERLTDFG KALRNSSLDELPELWNVVKGDMSLVGPRPLLMEYLPLYSKEQARRHNVRPGITGYAQVNGRNAIGWDKKFELDTWYIDNQ SLWLDIKILLKTVKKVVIKDGISADGEATMSKFTGSQNQSALESSYE
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=195, Percent_Identity=41.5384615384615, Blast_Score=134, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 23260; Mature: 23260
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRLFDITAATTALVVLSPVYAITAYKVKQNLGSPVLFRQTRPGLDGKPFEMIKFRTMK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHEEEHHC DATDSEGNPLPDSERLTDFGKALRNSSLDELPELWNVVKGDMSLVGPRPLLMEYLPLYSK CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCH EQARRHNVRPGITGYAQVNGRNAIGWDKKFELDTWYIDNQSLWLDIKILLKTVKKVVIKD HHHHHCCCCCCCCEEEEECCCCCCCCCCEECCEEEEECCCCEEEHHHHHHHHHHHHHHHC GISADGEATMSKFTGSQNQSALESSYE CCCCCCHHHHHHHCCCCCHHHHHHCCC >Mature Secondary Structure MIKRLFDITAATTALVVLSPVYAITAYKVKQNLGSPVLFRQTRPGLDGKPFEMIKFRTMK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHEEEHHC DATDSEGNPLPDSERLTDFGKALRNSSLDELPELWNVVKGDMSLVGPRPLLMEYLPLYSK CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCH EQARRHNVRPGITGYAQVNGRNAIGWDKKFELDTWYIDNQSLWLDIKILLKTVKKVVIKD HHHHHCCCCCCCCEEEEECCCCCCCCCCEECCEEEEECCCCEEEHHHHHHHHHHHHHHHC GISADGEATMSKFTGSQNQSALESSYE CCCCCCHHHHHHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]