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The map label for this gene is insF1 [C]

Identifier: 93005461

GI number: 93005461

Start: 749238

End: 750056

Strand: Direct

Name: insF1 [C]

Synonym: Pcryo_0631

Alternate gene names: 93005461

Gene position: 749238-750056 (Clockwise)

Preceding gene: 93005460

Following gene: 93005462

Centisome position: 24.49

GC content: 43.22

Gene sequence:

>819_bases
ATGTGCCGTGTATTGAGCGTTAAGCCATCAAGCTATTACGATTGGATAAATCGTGATATTAGCAGCCAGCAGATACATCG
TAACCAGTCTGAGCTGCTAATCAAAGCGGCACACAGTGAAACAAAGGAGCGCTACGGCTTTGAGCGTCTGCATGCGCATC
TAAATGAGCAAGGATATGATATCAGCCCATACATGGTCAGAAATATTAAAGAGGAGCATGGCATCAAATGCCGTCGCCAC
AAGCGCTTTAAGGTCACCACTGACTCTAATCATAATAAGCTCATCTATGACAACGTGCTCGATCAGCAGTTTGACGTCAA
CCGCCCTAACGAAGCCTGGGTCAGTGATATCACCTATATCTGGACAACCGAGGGCTGGCTGTACTTAGCAGGCGTTAAAG
ACTTGTATACCAAAGAGCTGGTTGGCTATGCCATCAACAAACGTATGACCGCTGACTTAGTTTGCAAAGCATTGAACATG
GCAATTAAGAATAAGAGACCAAGCAAGGGACTAATTGTTCACTCTGACAGAGGCGGTCAGTACTGTAGCCATGCGTATCA
TAAAATTATTAAACAGCATCAGTTTAAAGGCTCCATGAGTGGTAAAGGTAATTGTTATGACAACGCACCCATAGAGAGCT
TCTGGGGTGTATTAAAGAATGAGCTGGTATATCATCAGGACTATAAGACTAGATTTGCCGCTATTACCGATATCATTAGA
TATATCGAGTTGTACTACAACCAAACGAGAATTCAAAAGGGTTTAGGCTATAAATCGCCAAGACAGGTGTGGTTTGACTA
TTATCGTCAAGCTGCATAA

Upstream 100 bases:

>100_bases
AGCGCGAAATTCTAAAAAAGGCGACGGCGTACTTCGCCAAACACAGCTAGTAAAGTACGCCTTTGTTAAAGACAACCAGC
CAATCTTTAGCATCACCACT

Downstream 100 bases:

>100_bases
TTAAATCTCCCAAGTCTAACTGTACGGATTTGACGGCAGGGGTCACGTCTCTTCCAGTTTTGTATGGTGGTTGAACTGAG
ATTGTAAAACTCAGCTGCCT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MCRVLSVKPSSYYDWINRDISSQQIHRNQSELLIKAAHSETKERYGFERLHAHLNEQGYDISPYMVRNIKEEHGIKCRRH
KRFKVTTDSNHNKLIYDNVLDQQFDVNRPNEAWVSDITYIWTTEGWLYLAGVKDLYTKELVGYAINKRMTADLVCKALNM
AIKNKRPSKGLIVHSDRGGQYCSHAYHKIIKQHQFKGSMSGKGNCYDNAPIESFWGVLKNELVYHQDYKTRFAAITDIIR
YIELYYNQTRIQKGLGYKSPRQVWFDYYRQAA

Sequences:

>Translated_272_residues
MCRVLSVKPSSYYDWINRDISSQQIHRNQSELLIKAAHSETKERYGFERLHAHLNEQGYDISPYMVRNIKEEHGIKCRRH
KRFKVTTDSNHNKLIYDNVLDQQFDVNRPNEAWVSDITYIWTTEGWLYLAGVKDLYTKELVGYAINKRMTADLVCKALNM
AIKNKRPSKGLIVHSDRGGQYCSHAYHKIIKQHQFKGSMSGKGNCYDNAPIESFWGVLKNELVYHQDYKTRFAAITDIIR
YIELYYNQTRIQKGLGYKSPRQVWFDYYRQAA
>Mature_272_residues
MCRVLSVKPSSYYDWINRDISSQQIHRNQSELLIKAAHSETKERYGFERLHAHLNEQGYDISPYMVRNIKEEHGIKCRRH
KRFKVTTDSNHNKLIYDNVLDQQFDVNRPNEAWVSDITYIWTTEGWLYLAGVKDLYTKELVGYAINKRMTADLVCKALNM
AIKNKRPSKGLIVHSDRGGQYCSHAYHKIIKQHQFKGSMSGKGNCYDNAPIESFWGVLKNELVYHQDYKTRFAAITDIIR
YIELYYNQTRIQKGLGYKSPRQVWFDYYRQAA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=230, Percent_Identity=32.1739130434783, Blast_Score=132, Evalue=2e-31,
Organism=Escherichia coli, GI1788405, Length=264, Percent_Identity=39.7727272727273, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1787263, Length=264, Percent_Identity=39.7727272727273, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1786753, Length=264, Percent_Identity=39.7727272727273, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1786570, Length=264, Percent_Identity=39.7727272727273, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1786490, Length=264, Percent_Identity=39.7727272727273, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1789981, Length=231, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32092; Mature: 32092

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRVLSVKPSSYYDWINRDISSQQIHRNQSELLIKAAHSETKERYGFERLHAHLNEQGYD
CCEEEECCCCHHHHHHHCCCCHHHHHCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCC
ISPYMVRNIKEEHGIKCRRHKRFKVTTDSNHNKLIYDNVLDQQFDVNRPNEAWVSDITYI
CCHHHHHHCCHHHCCCEECCCCEEEEECCCCCEEEEHHHCCCCCCCCCCCHHHHHCEEEE
WTTEGWLYLAGVKDLYTKELVGYAINKRMTADLVCKALNMAIKNKRPSKGLIVHSDRGGQ
EECCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCH
YCSHAYHKIIKQHQFKGSMSGKGNCYDNAPIESFWGVLKNELVYHQDYKTRFAAITDIIR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHH
YIELYYNQTRIQKGLGYKSPRQVWFDYYRQAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MCRVLSVKPSSYYDWINRDISSQQIHRNQSELLIKAAHSETKERYGFERLHAHLNEQGYD
CCEEEECCCCHHHHHHHCCCCHHHHHCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCC
ISPYMVRNIKEEHGIKCRRHKRFKVTTDSNHNKLIYDNVLDQQFDVNRPNEAWVSDITYI
CCHHHHHHCCHHHCCCEECCCCEEEEECCCCCEEEEHHHCCCCCCCCCCCHHHHHCEEEE
WTTEGWLYLAGVKDLYTKELVGYAINKRMTADLVCKALNMAIKNKRPSKGLIVHSDRGGQ
EECCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCH
YCSHAYHKIIKQHQFKGSMSGKGNCYDNAPIESFWGVLKNELVYHQDYKTRFAAITDIIR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHHH
YIELYYNQTRIQKGLGYKSPRQVWFDYYRQAA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]