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The map label for this gene is nuoJ [H]

Identifier: 93005411

GI number: 93005411

Start: 693933

End: 694676

Strand: Direct

Name: nuoJ [H]

Synonym: Pcryo_0581

Alternate gene names: 93005411

Gene position: 693933-694676 (Clockwise)

Preceding gene: 93005410

Following gene: 93005412

Centisome position: 22.68

GC content: 44.22

Gene sequence:

>744_bases
ATGATGAATATTTTAAATAATCCTGAATTGGCAGGGTTTTACTCATTAGCAGCGGTAGCAATATTTGCCAGTTTGCGCGT
GGTAACCCAAGCCAATCCAGTGCATGCTATTTTATCGATGATTGTGTCATTGCTGGCAATCGCTGGCATATTTTTTGTGA
TAGGTGCGCCGTTTGCTGGAGCACTTGAAATTGTCGTTTACGCGGGTGCCATTATGGTGCTGTTCGTCTTCGTGATTATG
ATGCTGAATTTAGGCATGCGTAATGATGAGCGGGAAGAGCGTTGGCTTGATGCCGGCACTTGGGCGATACCGACAGGCTT
GACGATTATTATCGCAGTTGTGCTGTATGCAATGATTGGTCTTAATCATAACGAAGCAGCTCTGATTGGCGGTACTACGA
TTTCAGCCAAAGCAGTGGGTACGGTGTTATTTACCAAATATATTATGTTGATAGAAGTAGCCGCATTGCTACTACTCGCA
GCCTTAGTTGCAGCTTATCATTTAGGTAAAGAAGCTATCGATGATGAGATTATCGGTAATGATAGCCTAGTAGCCAGTCC
AAATGTCGGTAGTATTGAGCTGTACGAAAACGACAGCATGCACACCAATAACGATGTAGTAAAGATGGCAAAACCATACG
AATATAAAGATGTCGACCCGCATGATTATGTGGGCATGAAGGTCGGCATGAAAGCAGGTACGCAGAACGGTATGAAGAAA
GTCACGCGCAAGGAGTCAGACTGA

Upstream 100 bases:

>100_bases
ATTATAACTATTATCGCGTGACGGGTATGGCGGTAGCAGATAAACCAAAAGGCGCAGCGCAAAATGAAGCGGCACCGATT
GATCTAAGGAGCTTGCTACC

Downstream 100 bases:

>100_bases
TGGTACTAGCAGCAAGCGTGGTACAAGAGGTTGCCAATGTGCCGTTTGCCCATGAAGTAGCAGGCTTAGTGCAGCCGGTT
GCTGAGGCGCAAAATGTACT

Product: NADH dehydrogenase (quinone)

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J; NUO10 [H]

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MMNILNNPELAGFYSLAAVAIFASLRVVTQANPVHAILSMIVSLLAIAGIFFVIGAPFAGALEIVVYAGAIMVLFVFVIM
MLNLGMRNDEREERWLDAGTWAIPTGLTIIIAVVLYAMIGLNHNEAALIGGTTISAKAVGTVLFTKYIMLIEVAALLLLA
ALVAAYHLGKEAIDDEIIGNDSLVASPNVGSIELYENDSMHTNNDVVKMAKPYEYKDVDPHDYVGMKVGMKAGTQNGMKK
VTRKESD

Sequences:

>Translated_247_residues
MMNILNNPELAGFYSLAAVAIFASLRVVTQANPVHAILSMIVSLLAIAGIFFVIGAPFAGALEIVVYAGAIMVLFVFVIM
MLNLGMRNDEREERWLDAGTWAIPTGLTIIIAVVLYAMIGLNHNEAALIGGTTISAKAVGTVLFTKYIMLIEVAALLLLA
ALVAAYHLGKEAIDDEIIGNDSLVASPNVGSIELYENDSMHTNNDVVKMAKPYEYKDVDPHDYVGMKVGMKAGTQNGMKK
VTRKESD
>Mature_247_residues
MMNILNNPELAGFYSLAAVAIFASLRVVTQANPVHAILSMIVSLLAIAGIFFVIGAPFAGALEIVVYAGAIMVLFVFVIM
MLNLGMRNDEREERWLDAGTWAIPTGLTIIIAVVLYAMIGLNHNEAALIGGTTISAKAVGTVLFTKYIMLIEVAALLLLA
ALVAAYHLGKEAIDDEIIGNDSLVASPNVGSIELYENDSMHTNNDVVKMAKPYEYKDVDPHDYVGMKVGMKAGTQNGMKK
VTRKESD

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=169, Percent_Identity=54.4378698224852, Blast_Score=175, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 26593; Mature: 26593

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNILNNPELAGFYSLAAVAIFASLRVVTQANPVHAILSMIVSLLAIAGIFFVIGAPFAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ALEIVVYAGAIMVLFVFVIMMLNLGMRNDEREERWLDAGTWAIPTGLTIIIAVVLYAMIG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
LNHNEAALIGGTTISAKAVGTVLFTKYIMLIEVAALLLLAALVAAYHLGKEAIDDEIIGN
CCCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
DSLVASPNVGSIELYENDSMHTNNDVVKMAKPYEYKDVDPHDYVGMKVGMKAGTQNGMKK
CCEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHCHHHCCCCCCHHHHHH
VTRKESD
HHHCCCC
>Mature Secondary Structure
MMNILNNPELAGFYSLAAVAIFASLRVVTQANPVHAILSMIVSLLAIAGIFFVIGAPFAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ALEIVVYAGAIMVLFVFVIMMLNLGMRNDEREERWLDAGTWAIPTGLTIIIAVVLYAMIG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
LNHNEAALIGGTTISAKAVGTVLFTKYIMLIEVAALLLLAALVAAYHLGKEAIDDEIIGN
CCCCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
DSLVASPNVGSIELYENDSMHTNNDVVKMAKPYEYKDVDPHDYVGMKVGMKAGTQNGMKK
CCEEECCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHCHHHCCCCCCHHHHHH
VTRKESD
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]