Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is pssA [H]
Identifier: 93005382
GI number: 93005382
Start: 649562
End: 650509
Strand: Direct
Name: pssA [H]
Synonym: Pcryo_0552
Alternate gene names: 93005382
Gene position: 649562-650509 (Clockwise)
Preceding gene: 93005381
Following gene: 93005383
Centisome position: 21.23
GC content: 44.2
Gene sequence:
>948_bases ATGACGACTGATCAATCATCACGTAGCCTTGAAAAAAACAATCTTGCAAAGGGCAGTCTGGTCACTGATAAAGTGATGAA TGACGGTTTGATCAAAGAGCCCTTATTACAAGATAGCGCTGCCACTCAACCGCCCTTTGTGGATGAGCATGATTTCGATA TTCGCTTGGCGGATAATGAGAACTATGATGGGCTGACGTTCGAGGTGATTGAAGCGGAAGTCGCTGAAGGTAAGCGGGTA GTCAGTCGCGGTGTTTATTTAGCGCCCAACTTGATCACCACTTTATCGCTGCTGTCAGGCTTTTATTCTATTTTAGCCAG TACCCAAGGTGAGTTCTATAAAGCCTCTTTAGCGATTTTCTTATCGGCTATTTTGGATGGTGCAGATGGTCGGGTAGCGC GTATGTTAAATGCGCAAAGCCCCTTTGGTGAGCAGTATGATTCGCTTGCCGATATGTTAGCTTTTGGTGTCGCACCGGCA ATCTTAATTTATAGCTTTGCTTTGCAGCCGTTGGGTCGCATTGGATTGGGCTGTGCTTTTGTCTTTACTGCCTGTGCTGC CTTCCGTCTAGCACGTTTTAACGTTCAGATTGGTGAGGTTGATAAAAAATACTTTGTTGGTTTGGCCAGTCCGCTTGCCG CTATTTTGGTCACAGCGGCTGTTATGGTTGCCGTTGATCACAATCAATGGATCGGACAATACGATACGCTTGTGATGTTT TTATTTGCTGCTTGGGTCGTTATTTGCGGTTTGCTTATGGTTAGCAATGTCAAATACTATAGCTTCAAAGAGTTTGATAA GAAGAAAGTCCCTTTCGTGGTGCTTATCGTTGGTGTATTGGTCATGAGTATCGTGTTATATGATATTCCAGTCGGCATTT TAGCGATTGGTGTTATTTATGCCTTGTCAGGTATTGTTAGCACCTTACAAGCCAAAGCGACCAGTTAA
Upstream 100 bases:
>100_bases CGTTTCTTACAGCCTGTATTAAAAGTTGCTGATGCACCAGATTTAACACCTGATAGTGCAACCACCGTCCGCTGGTTGGT TGGCGAATAAGGATATTGAT
Downstream 100 bases:
>100_bases TACTATAGCTTTTTATAGTATTAACTTAAGAAACGCAAAAAAACCGCTTATTTTTTAATAGGCGGTTTTTATTTGCGTGC TAGTTTTTGATTCTATTGGG
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTTDQSSRSLEKNNLAKGSLVTDKVMNDGLIKEPLLQDSAATQPPFVDEHDFDIRLADNENYDGLTFEVIEAEVAEGKRV VSRGVYLAPNLITTLSLLSGFYSILASTQGEFYKASLAIFLSAILDGADGRVARMLNAQSPFGEQYDSLADMLAFGVAPA ILIYSFALQPLGRIGLGCAFVFTACAAFRLARFNVQIGEVDKKYFVGLASPLAAILVTAAVMVAVDHNQWIGQYDTLVMF LFAAWVVICGLLMVSNVKYYSFKEFDKKKVPFVVLIVGVLVMSIVLYDIPVGILAIGVIYALSGIVSTLQAKATS
Sequences:
>Translated_315_residues MTTDQSSRSLEKNNLAKGSLVTDKVMNDGLIKEPLLQDSAATQPPFVDEHDFDIRLADNENYDGLTFEVIEAEVAEGKRV VSRGVYLAPNLITTLSLLSGFYSILASTQGEFYKASLAIFLSAILDGADGRVARMLNAQSPFGEQYDSLADMLAFGVAPA ILIYSFALQPLGRIGLGCAFVFTACAAFRLARFNVQIGEVDKKYFVGLASPLAAILVTAAVMVAVDHNQWIGQYDTLVMF LFAAWVVICGLLMVSNVKYYSFKEFDKKKVPFVVLIVGVLVMSIVLYDIPVGILAIGVIYALSGIVSTLQAKATS >Mature_314_residues TTDQSSRSLEKNNLAKGSLVTDKVMNDGLIKEPLLQDSAATQPPFVDEHDFDIRLADNENYDGLTFEVIEAEVAEGKRVV SRGVYLAPNLITTLSLLSGFYSILASTQGEFYKASLAIFLSAILDGADGRVARMLNAQSPFGEQYDSLADMLAFGVAPAI LIYSFALQPLGRIGLGCAFVFTACAAFRLARFNVQIGEVDKKYFVGLASPLAAILVTAAVMVAVDHNQWIGQYDTLVMFL FAAWVVICGLLMVSNVKYYSFKEFDKKKVPFVVLIVGVLVMSIVLYDIPVGILAIGVIYALSGIVSTLQAKATS
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=149, Percent_Identity=38.255033557047, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 34113; Mature: 33982
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDQSSRSLEKNNLAKGSLVTDKVMNDGLIKEPLLQDSAATQPPFVDEHDFDIRLADNE CCCCCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCC NYDGLTFEVIEAEVAEGKRVVSRGVYLAPNLITTLSLLSGFYSILASTQGEFYKASLAIF CCCCCCHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LSAILDGADGRVARMLNAQSPFGEQYDSLADMLAFGVAPAILIYSFALQPLGRIGLGCAF HHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFTACAAFRLARFNVQIGEVDKKYFVGLASPLAAILVTAAVMVAVDHNQWIGQYDTLVMF HHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LFAAWVVICGLLMVSNVKYYSFKEFDKKKVPFVVLIVGVLVMSIVLYDIPVGILAIGVIY HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSGIVSTLQAKATS HHHHHHHHHHHHCCC >Mature Secondary Structure TTDQSSRSLEKNNLAKGSLVTDKVMNDGLIKEPLLQDSAATQPPFVDEHDFDIRLADNE CCCCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCC NYDGLTFEVIEAEVAEGKRVVSRGVYLAPNLITTLSLLSGFYSILASTQGEFYKASLAIF CCCCCCHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LSAILDGADGRVARMLNAQSPFGEQYDSLADMLAFGVAPAILIYSFALQPLGRIGLGCAF HHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFTACAAFRLARFNVQIGEVDKKYFVGLASPLAAILVTAAVMVAVDHNQWIGQYDTLVMF HHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LFAAWVVICGLLMVSNVKYYSFKEFDKKKVPFVVLIVGVLVMSIVLYDIPVGILAIGVIY HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSGIVSTLQAKATS HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]