Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is queF [H]
Identifier: 93005292
GI number: 93005292
Start: 565936
End: 566793
Strand: Direct
Name: queF [H]
Synonym: Pcryo_0462
Alternate gene names: 93005292
Gene position: 565936-566793 (Clockwise)
Preceding gene: 93005291
Following gene: 93005294
Centisome position: 18.5
GC content: 41.14
Gene sequence:
>858_bases ATGAGTATCCACGGTATCTTGGGTGAACAAACCACTGATTATCCAACTGAGTATAGTCCAGAGACGTTATATCCGATTGC TCGTAGTATGGGGCGAGAGGTCATTGGTTGGCAGGATGATAAGCTAGAGGTAGGTTTCGATTGGTGGCAGGCATTTGAGC TGTCATGGTTAAATGAGCAAGGTATATCGCAGGTTGCGATAGCACGCTTTGGCATTCCGGCAAGCTCGCCATTTATTGTT GAATCAAAGTCATTGAAGCTTTATCTAAATAGTATCAACTTTACTGAATTTGGTAGTTTGGAAACAGTACAAACGCTGAT AGCGAAAGATTTGTCGAAATGCGTACAAGCTGAAGTTAATGTTGAATTGTTTGACTTAGAGGATGAGCATTCAGGGCTAT TGATCGCTCAGCCTGATGGCATTTGTATTGATGATGCACTAGCGGACAGTACTGAGAAAGTAGCATTAACGCTGCATCCT GATGCGTCATTATTAGAACGTAATACAAGTGATGCTAAAATATCAGAGGGTAAAACTTTTAGCTTTTATTCTAATCTATT ACGTAGTAATTGTCCGGTGACCAATCAGCCAGATTGGGGGACATTGGCAGTTTCGATAACCAGTAATAAGCCAGTTAATA ACGCAAATATGCTGCGTTATATATTAAGTTTCCGTCAGCATAATGGCTTTCATGAGCAATGTGTCGAGCAGATATTTGCT GATTTGAGTCAATACTATGAGCCAAGTGAGCTCATGGTTCGTGCTTGGTATACACGTCGAGGTGGTATTGATATCAATCC TTGTCGTGTCAGCGATATTGCATTATTGCCTGTGCCTAGTCGTTTGATTCGTCAATAA
Upstream 100 bases:
>100_bases ATATAAATCTTTCATCCCGTTCGAGCACTTGAACTGGTTAATAATCTTACTAAAACTTTAAATGTTATTTAATTTCAATC ATTACTATTAGGAAATACCA
Downstream 100 bases:
>100_bases TAAAAGCATTATGAATGGTTTTTAAATAAACCTCTAAGAATAAAAAAGCGCCTATCTCATATACTGAGATAGGCGCTTTT TATGGTACTAATTTTATCGT
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSIHGILGEQTTDYPTEYSPETLYPIARSMGREVIGWQDDKLEVGFDWWQAFELSWLNEQGISQVAIARFGIPASSPFIV ESKSLKLYLNSINFTEFGSLETVQTLIAKDLSKCVQAEVNVELFDLEDEHSGLLIAQPDGICIDDALADSTEKVALTLHP DASLLERNTSDAKISEGKTFSFYSNLLRSNCPVTNQPDWGTLAVSITSNKPVNNANMLRYILSFRQHNGFHEQCVEQIFA DLSQYYEPSELMVRAWYTRRGGIDINPCRVSDIALLPVPSRLIRQ
Sequences:
>Translated_285_residues MSIHGILGEQTTDYPTEYSPETLYPIARSMGREVIGWQDDKLEVGFDWWQAFELSWLNEQGISQVAIARFGIPASSPFIV ESKSLKLYLNSINFTEFGSLETVQTLIAKDLSKCVQAEVNVELFDLEDEHSGLLIAQPDGICIDDALADSTEKVALTLHP DASLLERNTSDAKISEGKTFSFYSNLLRSNCPVTNQPDWGTLAVSITSNKPVNNANMLRYILSFRQHNGFHEQCVEQIFA DLSQYYEPSELMVRAWYTRRGGIDINPCRVSDIALLPVPSRLIRQ >Mature_284_residues SIHGILGEQTTDYPTEYSPETLYPIARSMGREVIGWQDDKLEVGFDWWQAFELSWLNEQGISQVAIARFGIPASSPFIVE SKSLKLYLNSINFTEFGSLETVQTLIAKDLSKCVQAEVNVELFDLEDEHSGLLIAQPDGICIDDALADSTEKVALTLHPD ASLLERNTSDAKISEGKTFSFYSNLLRSNCPVTNQPDWGTLAVSITSNKPVNNANMLRYILSFRQHNGFHEQCVEQIFAD LSQYYEPSELMVRAWYTRRGGIDINPCRVSDIALLPVPSRLIRQ
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789158, Length=285, Percent_Identity=40.7017543859649, Blast_Score=207, Evalue=6e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016428 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 32059; Mature: 31928
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHGILGEQTTDYPTEYSPETLYPIARSMGREVIGWQDDKLEVGFDWWQAFELSWLNEQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCCCEEECHHHHHHHHHHHCCCC GISQVAIARFGIPASSPFIVESKSLKLYLNSINFTEFGSLETVQTLIAKDLSKCVQAEVN CHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC VELFDLEDEHSGLLIAQPDGICIDDALADSTEKVALTLHPDASLLERNTSDAKISEGKTF EEEEECCCCCCCEEEECCCCCEECHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCH SFYSNLLRSNCPVTNQPDWGTLAVSITSNKPVNNANMLRYILSFRQHNGFHEQCVEQIFA HHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH DLSQYYEPSELMVRAWYTRRGGIDINPCRVSDIALLPVPSRLIRQ HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHCC >Mature Secondary Structure SIHGILGEQTTDYPTEYSPETLYPIARSMGREVIGWQDDKLEVGFDWWQAFELSWLNEQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCCCCEEECHHHHHHHHHHHCCCC GISQVAIARFGIPASSPFIVESKSLKLYLNSINFTEFGSLETVQTLIAKDLSKCVQAEVN CHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC VELFDLEDEHSGLLIAQPDGICIDDALADSTEKVALTLHPDASLLERNTSDAKISEGKTF EEEEECCCCCCCEEEECCCCCEECHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCH SFYSNLLRSNCPVTNQPDWGTLAVSITSNKPVNNANMLRYILSFRQHNGFHEQCVEQIFA HHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH DLSQYYEPSELMVRAWYTRRGGIDINPCRVSDIALLPVPSRLIRQ HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA