Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is ygcG [H]
Identifier: 93005284
GI number: 93005284
Start: 558352
End: 559521
Strand: Direct
Name: ygcG [H]
Synonym: Pcryo_0454
Alternate gene names: 93005284
Gene position: 558352-559521 (Clockwise)
Preceding gene: 93005283
Following gene: 93005285
Centisome position: 18.25
GC content: 48.21
Gene sequence:
>1170_bases ATGACTCATTTAAAAACACCCCTAGCAGCGTTGTTATTCGCCCTTACTATTGGTAGCGCGTCTACATTGTATGCGGCGCC CGATGACAGTGCTATTGCTGAAGACAGCGTTTCGAACACGCAAAATCGCAGTGTGGAAGACTTAGTGGCTATTGCAAAAG CCGCTGAATCCAATGAAGCTATTAATGATGCTGTTTTAGGCAATGAGGCGATTAACGAAACCATACTCGGTAATGAAGCT ATCAATCCTAATGCATCCAATAATGAGGGTGTGGCAGAGGCAAATGCGACCAAACGTCCCCCTGTTACATCAACTGCTGA CAGTGTCGATGCGGACAAACTGATTTTAAACAATCCTGTCATTGACCAAGCTAATATCTTAAACCCACAAGAGAAGCAGC GCTTAGAAGCACAGCTACGTACAATTTATCAGCAAGGTTTGGCACAAGCAGCAGTGGTGATTGTCCCAACTACCAATGGC ATGCCTATCTTTGATTATGCCTTGCAAGTTGCTGAAAAATGGCAGCTGGGTAGTAAAGACATCGATGATGGTTTGCTTGT GGTTGTCGCTGTCAATGACCGTGATATGTATATATTGACAGGTTATGGACTCGAAGGTGTACTGCCAGATGCGGCGGTCA ATCGCATCATTCGAGAGGATATTACCCCGTTATTTAAGCAAAATAATTATGGAGCAGGGATATTGGCAGGCGTAACAGCC TTACAAAGTCGTTTATCTGCTGATCCTGAAGTGCTTGCTCGTGCCGATGCGCAGGCAGCTGAACGTACTACCCAACAAGG CTCAGACGAGCTGCCATCTCCTATTTTTCTATTCATCATGGCGATGATATTTGGTAGCTTTATTACCAGTATATTTGGTC GAGTATTCGGTTCTGTACTGACGGCCGGTGGTTTTGTTGCAGGCTCACTAGCATTGGGCGGTGGTCTATTTATGACCATC ATTATGGCGATATTTTTATGGCTGTTCTTGATTTCACGCGGTGGCGGTAAAGGCGGGTCTGGCGGCGGTAAAGGAGGTAG AGGCGGTGGTATGATATTCCTACCGGGTATGGGCGGTGGCGGTGGCTTCGGCGGCGGCGGTTTTGGTGGTGGCGGCTTCG GCGGTGGCGGTGGCGGTTTTGGTGGTGGCGGCGCTGGCGGTTCTTGGTAA
Upstream 100 bases:
>100_bases ATTAAAAACAGGTAGAGCATCAAGTACCGATTAAATACTTACTGATTGCCGCTCTATTTATTAATTTAGTAAAGATCTGA CTTGAGGTGGTATACAGTTA
Downstream 100 bases:
>100_bases GCATTAGCCCGTTGTTTTTCAGTGGCTTCATAGCTACCTAGTAAAGACACTAAATAACCATTAGTAATGACGTACTTGAG GAAATAGTATCATGGCAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTHLKTPLAALLFALTIGSASTLYAAPDDSAIAEDSVSNTQNRSVEDLVAIAKAAESNEAINDAVLGNEAINETILGNEA INPNASNNEGVAEANATKRPPVTSTADSVDADKLILNNPVIDQANILNPQEKQRLEAQLRTIYQQGLAQAAVVIVPTTNG MPIFDYALQVAEKWQLGSKDIDDGLLVVVAVNDRDMYILTGYGLEGVLPDAAVNRIIREDITPLFKQNNYGAGILAGVTA LQSRLSADPEVLARADAQAAERTTQQGSDELPSPIFLFIMAMIFGSFITSIFGRVFGSVLTAGGFVAGSLALGGGLFMTI IMAIFLWLFLISRGGGKGGSGGGKGGRGGGMIFLPGMGGGGGFGGGGFGGGGFGGGGGGFGGGGAGGSW
Sequences:
>Translated_389_residues MTHLKTPLAALLFALTIGSASTLYAAPDDSAIAEDSVSNTQNRSVEDLVAIAKAAESNEAINDAVLGNEAINETILGNEA INPNASNNEGVAEANATKRPPVTSTADSVDADKLILNNPVIDQANILNPQEKQRLEAQLRTIYQQGLAQAAVVIVPTTNG MPIFDYALQVAEKWQLGSKDIDDGLLVVVAVNDRDMYILTGYGLEGVLPDAAVNRIIREDITPLFKQNNYGAGILAGVTA LQSRLSADPEVLARADAQAAERTTQQGSDELPSPIFLFIMAMIFGSFITSIFGRVFGSVLTAGGFVAGSLALGGGLFMTI IMAIFLWLFLISRGGGKGGSGGGKGGRGGGMIFLPGMGGGGGFGGGGFGGGGFGGGGGGFGGGGAGGSW >Mature_388_residues THLKTPLAALLFALTIGSASTLYAAPDDSAIAEDSVSNTQNRSVEDLVAIAKAAESNEAINDAVLGNEAINETILGNEAI NPNASNNEGVAEANATKRPPVTSTADSVDADKLILNNPVIDQANILNPQEKQRLEAQLRTIYQQGLAQAAVVIVPTTNGM PIFDYALQVAEKWQLGSKDIDDGLLVVVAVNDRDMYILTGYGLEGVLPDAAVNRIIREDITPLFKQNNYGAGILAGVTAL QSRLSADPEVLARADAQAAERTTQQGSDELPSPIFLFIMAMIFGSFITSIFGRVFGSVLTAGGFVAGSLALGGGLFMTII MAIFLWLFLISRGGGKGGSGGGKGGRGGGMIFLPGMGGGGGFGGGGFGGGGFGGGGGGFGGGGAGGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=135, Percent_Identity=39.2592592592593, Blast_Score=98, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 39728; Mature: 39597
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHLKTPLAALLFALTIGSASTLYAAPDDSAIAEDSVSNTQNRSVEDLVAIAKAAESNEA CCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCHH INDAVLGNEAINETILGNEAINPNASNNEGVAEANATKRPPVTSTADSVDADKLILNNPV HHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC IDQANILNPQEKQRLEAQLRTIYQQGLAQAAVVIVPTTNGMPIFDYALQVAEKWQLGSKD CCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC IDDGLLVVVAVNDRDMYILTGYGLEGVLPDAAVNRIIREDITPLFKQNNYGAGILAGVTA CCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LQSRLSADPEVLARADAQAAERTTQQGSDELPSPIFLFIMAMIFGSFITSIFGRVFGSVL HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAGGFVAGSLALGGGLFMTIIMAIFLWLFLISRGGGKGGSGGGKGGRGGGMIFLPGMGGG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC GGFGGGGFGGGGFGGGGGGFGGGGAGGSW CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure THLKTPLAALLFALTIGSASTLYAAPDDSAIAEDSVSNTQNRSVEDLVAIAKAAESNEA CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCHH INDAVLGNEAINETILGNEAINPNASNNEGVAEANATKRPPVTSTADSVDADKLILNNPV HHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC IDQANILNPQEKQRLEAQLRTIYQQGLAQAAVVIVPTTNGMPIFDYALQVAEKWQLGSKD CCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC IDDGLLVVVAVNDRDMYILTGYGLEGVLPDAAVNRIIREDITPLFKQNNYGAGILAGVTA CCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LQSRLSADPEVLARADAQAAERTTQQGSDELPSPIFLFIMAMIFGSFITSIFGRVFGSVL HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAGGFVAGSLALGGGLFMTIIMAIFLWLFLISRGGGKGGSGGGKGGRGGGMIFLPGMGGG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC GGFGGGGFGGGGFGGGGGGFGGGGAGGSW CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]