Click here to switch to the map view.

The map label for this gene is tolB [H]

Identifier: 93005276

GI number: 93005276

Start: 547280

End: 548302

Strand: Direct

Name: tolB [H]

Synonym: Pcryo_0446

Alternate gene names: 93005276

Gene position: 547280-548302 (Clockwise)

Preceding gene: 93005275

Following gene: 93005277

Centisome position: 17.89

GC content: 47.8

Gene sequence:

>1023_bases
ATGTTAAAAACCACTGTCTTAAAACCGACTGTTAATATTCGTAGGCTAAATAGTACTGTTCCTATTATCATGCTTTCAAT
GCTGGCGGTATTAACAGGCTGCCAGACCGTGCCAACTGCTTTGTCCAAAGCGCCTAGCGCGATGGCTATGAATAATCCGC
TCACTATTGGCATGCCAGCAATAGATCGACAAGGTTATATTGCTTATGTAGAGGAGCAAGGCGTGGGTACTGCCAAGATC
TCGACGCTATATCGTATCCGCCCCGATGGTAGCGGGCTTCAATTGATTGATCAGCTAAATGGCTATATCTACGCGCCTAC
GTGGTCAGCGGATGGTCAAATGCTCGCTTATAGCAAACAAGCCGCGCGCCAGCATCCAAAGATTTATATTTACGATGTCA
AAAGTAGTAGTCATAATTTGGTCGTCAATGTAGAAGGTAGCAATTTATCACCGTCATTCTCACCGGATGGCAAAAAGCTG
CTTTATAGCTCAACCGTTGGTGGCAATGCCGATATCTATGAGATGCAGCTTAGTGATGGCAGTACCAAACAGCTTACCAC
GCTACCGAGTACTGAAGTGCAGCCAAGCTATGCCAGCGATGGGCAGAGCTTTGTCTATACCAGTGATAAAGTCCGCGCTG
GTCGCCCAAGCATTTATCGTTATAGCTTTGCCACGGGCAACGCCGCGCTGATAACGACGGGAGGCTATGCTGCCAGTCCT
CAGCTTAGCTTAGATAGTCAACGTTTGGCATATCTCAATGGTCGCAAAGCGGCAGTAATGATGCTTACCACAGGACAAGT
CATCAATCTGGCAGAAACGGGACTCGATGAGCCTGCGCGCCTATCACCTTCTGGACAATACGCCCTCTATCCAACACGTC
AGTCAAATTTGGGTGGACAAGTAGGAGGTCAAAGCAGTCAAAGTGGCGGCAGCTTGGTTATCCATTCTTTAGCAGGTAAT
ACCAGTTATGCGATTAGCAGTAAAACGGGCGGAGTAGTACGCTCACCAATTTGGGGTCGTTAA

Upstream 100 bases:

>100_bases
TGACTTATATTTCATTTAGCACTCTTCTACTTGATATTATTAATAGTAAGTTGCACGTTTTAAATAGCTCATATCGAATG
GATCTATAGGACTTTATCGT

Downstream 100 bases:

>100_bases
GCGATTTTTTTAATTTAAAGGTAAATATCATGGCGCATAAAAAGAAAAATGTCCGCAAAAAACTCTGCCCTGTCTGCGAG
CGCGAATTTAGTTGGACTAA

Product: WD-40-like beta propeller repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MLKTTVLKPTVNIRRLNSTVPIIMLSMLAVLTGCQTVPTALSKAPSAMAMNNPLTIGMPAIDRQGYIAYVEEQGVGTAKI
STLYRIRPDGSGLQLIDQLNGYIYAPTWSADGQMLAYSKQAARQHPKIYIYDVKSSSHNLVVNVEGSNLSPSFSPDGKKL
LYSSTVGGNADIYEMQLSDGSTKQLTTLPSTEVQPSYASDGQSFVYTSDKVRAGRPSIYRYSFATGNAALITTGGYAASP
QLSLDSQRLAYLNGRKAAVMMLTTGQVINLAETGLDEPARLSPSGQYALYPTRQSNLGGQVGGQSSQSGGSLVIHSLAGN
TSYAISSKTGGVVRSPIWGR

Sequences:

>Translated_340_residues
MLKTTVLKPTVNIRRLNSTVPIIMLSMLAVLTGCQTVPTALSKAPSAMAMNNPLTIGMPAIDRQGYIAYVEEQGVGTAKI
STLYRIRPDGSGLQLIDQLNGYIYAPTWSADGQMLAYSKQAARQHPKIYIYDVKSSSHNLVVNVEGSNLSPSFSPDGKKL
LYSSTVGGNADIYEMQLSDGSTKQLTTLPSTEVQPSYASDGQSFVYTSDKVRAGRPSIYRYSFATGNAALITTGGYAASP
QLSLDSQRLAYLNGRKAAVMMLTTGQVINLAETGLDEPARLSPSGQYALYPTRQSNLGGQVGGQSSQSGGSLVIHSLAGN
TSYAISSKTGGVVRSPIWGR
>Mature_340_residues
MLKTTVLKPTVNIRRLNSTVPIIMLSMLAVLTGCQTVPTALSKAPSAMAMNNPLTIGMPAIDRQGYIAYVEEQGVGTAKI
STLYRIRPDGSGLQLIDQLNGYIYAPTWSADGQMLAYSKQAARQHPKIYIYDVKSSSHNLVVNVEGSNLSPSFSPDGKKL
LYSSTVGGNADIYEMQLSDGSTKQLTTLPSTEVQPSYASDGQSFVYTSDKVRAGRPSIYRYSFATGNAALITTGGYAASP
QLSLDSQRLAYLNGRKAAVMMLTTGQVINLAETGLDEPARLSPSGQYALYPTRQSNLGGQVGGQSSQSGGSLVIHSLAGN
TSYAISSKTGGVVRSPIWGR

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

Organism=Escherichia coli, GI1786961, Length=198, Percent_Identity=31.3131313131313, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 36167; Mature: 36167

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTTVLKPTVNIRRLNSTVPIIMLSMLAVLTGCQTVPTALSKAPSAMAMNNPLTIGMPA
CCCCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCEEEECCC
IDRQGYIAYVEEQGVGTAKISTLYRIRPDGSGLQLIDQLNGYIYAPTWSADGQMLAYSKQ
CCCCCCEEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHCCEEEEEEECCCCCEEEEEHH
AARQHPKIYIYDVKSSSHNLVVNVEGSNLSPSFSPDGKKLLYSSTVGGNADIYEMQLSDG
HHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCC
STKQLTTLPSTEVQPSYASDGQSFVYTSDKVRAGRPSIYRYSFATGNAALITTGGYAASP
CCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC
QLSLDSQRLAYLNGRKAAVMMLTTGQVINLAETGLDEPARLSPSGQYALYPTRQSNLGGQ
CCCCCCCEEEEECCCCEEEEEEECCCEEEHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC
VGGQSSQSGGSLVIHSLAGNTSYAISSKTGGVVRSPIWGR
CCCCCCCCCCCEEEEEECCCCEEEEECCCCCEECCCCCCC
>Mature Secondary Structure
MLKTTVLKPTVNIRRLNSTVPIIMLSMLAVLTGCQTVPTALSKAPSAMAMNNPLTIGMPA
CCCCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCEEEECCC
IDRQGYIAYVEEQGVGTAKISTLYRIRPDGSGLQLIDQLNGYIYAPTWSADGQMLAYSKQ
CCCCCCEEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHCCEEEEEEECCCCCEEEEEHH
AARQHPKIYIYDVKSSSHNLVVNVEGSNLSPSFSPDGKKLLYSSTVGGNADIYEMQLSDG
HHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCC
STKQLTTLPSTEVQPSYASDGQSFVYTSDKVRAGRPSIYRYSFATGNAALITTGGYAASP
CCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC
QLSLDSQRLAYLNGRKAAVMMLTTGQVINLAETGLDEPARLSPSGQYALYPTRQSNLGGQ
CCCCCCCEEEEECCCCEEEEEEECCCEEEHHHHCCCCCCCCCCCCCEEEEECCCCCCCCC
VGGQSSQSGGSLVIHSLAGNTSYAISSKTGGVVRSPIWGR
CCCCCCCCCCCEEEEEECCCCEEEEECCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA